||Qualification or relegation
|3||Tuen Mun (Q)||17||8||3||6||28||30||−2||27||Qualification to 2013 Hong Kong AFC Cup play-offs|
|4||Southern (Q)||18||6||6||6||24||27||−3||24||Qualification to 2013 Hong Kong AFC Cup play-offs 1|
|6||Biu Chun Rangers||18||5||5||8||32||52||−20||20||BCR 3–3 CIT BCR 2–2 SUN BCR 1–1 YHK
CIT 2–3 BCR CIT 1–2 SUN CIT 3–0 YHK
SUN 2–2 BCR SUN 1–1 CIT SUN 1–1 YHK
YHK 2–4 BCR YHK 1–1 CIT YHK 2–0 SUN
|7||Sunray Cave JC Sun Hei||18||4||8||6||26||33||−7||20|
|9||Yokohama FC Hong Kong||18||4||8||6||25||34||−9||20|
Updated to games played on 11 May 2013.
Rules for classification: 1) points; 2) head-to-head points; 3) head-to-head goal difference; 4) head-to-head goals scored; 5) goal difference; 6) number of goals scored.
1Southern qualified for the play-offs as Kitchee defeated Sun Pegasus in the FA Cup while they have guaranteed a place for the play-offs, meaning the league 4th place qualifies.
(C) = Champion; (R) = Relegated; (P) = Promoted; (E) = Eliminated; (O) = Play-off winner; (A) = Advances to a further round.
Only applicable when the season is not finished:
(Q) = Qualified to the phase of tournament indicated; (TQ) = Qualified to tournament, but not yet to the particular phase indicated; (RQ) = Qualified to the relegation tournament indicated; (DQ) = Disqualified from tournament.
Head-to-Head: used when head-to-head record is used to rank tied teams.