2D gel analysis software

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This page is a subsection of Gel electrophoresis.

2D gel analysis software typically serve four purposes:

  • analyze bio-markers by quantifying individual proteins
  • showing the separation between one or more protein "spots" on a scanned image of a 2-DE gel
  • match spots between gels of similar samples to show, for example, proteomic differences between early and advanced stages of an illness
  • in depth analysis

Alignment viewers/editors[edit]

Name Formats Supported Table of features License Link Developers
BioNumerics 2D 2-D gel TIFF files table of features commercial link Applied Maths
Delta2D commercial link Decodon
ImageMaster 2D commercial link GE Healthcare
Melanie table of features commercial link Geneva Bioinformatics (GeneBio)
PDQuest commercial link Bio-Rad Laboratories
Progenesis Samespots commercial link Nonlinear Dynamics
REDFIN commercial link Ludesi

See also[edit]