AceDB

From Wikipedia, the free encyclopedia
Jump to: navigation, search

AceDB is a biological database for handling genomic data. It was developed by Richard M. Durbin and Jean Thierry-Mieg.[1] AceDB stands for a C. elegans database. Although AceDB was initially created as a database specifically for the nematode worm it has also come to mean the database software itself, which has been used to store information for other species. For example, there is an AceDB instance for the organism Pristionchus pacificus called AppaDB.[2] Much of the functionality of AceDB for C. elegans has been made available through the WormBase database[3]

External links[edit]

References[edit]

  1. ^ Eeckman FH, Durbin R (1995). "ACeDB and macace.". Methods Cell Biol 48: 583–605. doi:10.1016/s0091-679x(08)61405-3. PMID 8531744. 
  2. ^ Srinivasan J, Otto GW, Kahlow U, Geisler R, Sommer RJ (January 2004). "AppaDB: an AcedB database for the nematode satellite organism Pristionchus pacificus". Nucleic Acids Res. 32 (Database issue): D421–2. doi:10.1093/nar/gkh057. PMC 308791. PMID 14681447. 
  3. ^ Stein L, Sternberg P, Durbin R, Thierry-Mieg J, Spieth J (January 2001). "WormBase: network access to the genome and biology of Caenorhabditis elegans". Nucleic Acids Res. 29 (1): 82–6. doi:10.1093/nar/29.1.82. PMC 29781. PMID 11125056.