Genome browser

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In bioinformatics, a genome browser is a graphical interface for display of information from a biological database for genomic data. Genome browsers enable researchers to visualize and browse entire genomes (most have many complete genomes) with annotated data including gene prediction and structure, proteins, expression, regulation, variation, comparative analysis, etc. Annotated data is usually from multiple diverse sources. They differ from ordinary biological databases in that they display data in a graphical format, with genome coordinates on one axis and the location of annotations indicated by a space-filling graphic to show the occurrence of genes, etc.

List of genome browsers[edit]

References[edit]

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  11. ^ Abeel, T.; Van Parys, T.; Saeys, Y.; Galagan, J.; Van De Peer, Y. (2011). "GenomeView: A next-generation genome browser". Nucleic Acids Research 40 (2): e12. doi:10.1093/nar/gkr995. PMC 3258165. PMID 22102585.  edit
  12. ^ Medina, I.; Salavert, F.; Sanchez, R.; De Maria, A.; Alonso, R.; Escobar, P.; Bleda, M.; Dopazo, J. (2013). "Genome Maps, a new generation genome browser". Nucleic Acids Research 41 (Web Server issue): W41–W46. doi:10.1093/nar/gkt530. PMC 3692043. PMID 23748955.  edit
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  23. ^ Zhou, X.; Maricque, B.; Xie, M.; Li, D.; Sundaram, V.; Martin, E. A.; Koebbe, B. C.; Nielsen, C.; Hirst, M.; Farnham, P.; Kuhn, R. M.; Zhu, J.; Smirnov, I.; Kent, W. J.; Haussler, D.; Madden, P. A. F.; Costello, J. F.; Wang, T. (2011). "The Human Epigenome Browser at Washington University". Nature Methods 8 (12): 989–990. doi:10.1038/nmeth.1772. PMC 3552640. PMID 22127213.  edit
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