Haplogroup A (Y-DNA)

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Haplogroup A
Time of origin
Place of origin Africa
Ancestor Y
Descendants A1, A2, A3
Defining mutations M91
Highest frequencies Southern Sudanese (e.g. Dinka), Khoisan, Ethiopian Jews

In human genetics, Haplogroup A (M91) is a Y-chromosome haplogroup. Haplogroup A is found mainly in the Southern Nile region and Southern Africa. It represents the oldest and most diverse of the human Y-chromosome haplogroups. It is believed to be the haplogroup corresponding to Y-chromosomal Adam.

Contents

[edit] Distribution

Haplogroup A is common among Khoisan people.

Haplogroup A is common among the Southern Sudanese (53%),[1] especially the Dinka Sudanese (62%),[2] and Khoisan people, such as the Bushmen 12-44% presence of haplogroup A in South African Khoisan tribes. Surprisingly, this particular haplogroup was not found in a sample of the Hadzabe from Tanzania, a population traditionally considered an ancient remnant of Khoisans due to the presence of click consonants in their language.

It has also been reported in 14.6% (7/48) of an Amhara sample,[3] 10.3% (8/78) of an Oromo sample,[3] 13.6% (12/88) of another sample from Ethiopia,[4] and 41% of a sample of the Beta Israel (Cruciani et al. 2002), and important percentages are also shared by Bantus in Kenya (14%, Luis et al. 2004), Iraqw in Tanzania (3/43 = 7.0% (Luis et al. 2004) to 1/6 = 17% (Knight et al. 2003)), and Fulbe in Cameroon (12%, Cruciani et al. 2002). Haplogroup A was also observed in a sample of a South Sudanese population at a frequency of 42.5% (Underhill et al. 2000).

[edit] Subclades

[edit] Tree

This phylogenetic tree of haplogroup A subclades is based on the YCC 2008 tree[5] and subsequent published research.

  • A
    • A- (M91, P97)
      • A1- (P108)
        • A1a- (M31, P82)
        • A1b- (P114)
      • A2- (M6, M14, M23, M49, M71, M135, M141, M196, M206, M212, MEH1, P3, P4, P5, P36.1, PK1, P247, P248)
        • A2a- (M114)
        • A2b- (P28)
        • A2c- (P262)
      • A3- (M32)
        • A3a- (M28, M59)
        • A3b- (M144, M190, M144, M190)
          • A3b1- (M51, P100, P291)
            • A3b1a- (P71, P102)
          • A3b2- (M13, M63, M127, M202, M219, M305)
            • A3b2a- (M171)
            • A3b2b- (M118)

[edit] A-M13

It must be noted, however, that the subclade of haplogroup A that is commonly found in East Africa and northern Cameroon (A3b2-M13) is different from those found in the Khoisan samples and only remotely related to them (it is actually only one of many subclades within haplogroup A). This finding suggests an ancient divergence.

[edit] A-P108

In 2007, seven men from Yorkshire, England sharing a distinctive surname were identified as being from the A1 subgroup of haplogroup A. It was discovered that these men had a common male-line ancestor from the 18th century, but no previous information about African ancestry was known. The A-P108 subgroup is extremely rare. In addition to the seven Yorkshire men, only 25 living carriers of the A-P108 subgroup are known, all of West African ancestry.[6]

[edit] References

  1. ^ 28/53 (Dinka, Nuer, and Shilluk) Y-Chromosome Variation Among Sudanese:Restricted Gene Flow, Concordance With Language, Geography, and History, Hassan et al. 2008
  2. ^ 16/26, Hassan et al. 2008
  3. ^ a b O. Semino et al., "Ethiopians and Khoisan Share the Deepest Clades of the Human Y-Chromosome Phylogeny," American Journal of Human Genetics 2002 January; 70(1): 265–268.
  4. ^ Underhill PA, Shen P, Lin AA, Jin L, Passarino G, Yang WH, Kauffman E, Bonne-Tamir B, Bertranpetit J, Francalacci P, Ibrahim M, Jenkins T, Kidd JR, Mehdi SQ, Seielstad MT, Wells RS, Piazza A, Davis RW, FeldmanMW, Cavalli-Sforza LL, Oefner PJ, "Y chromosome sequence variation and the history of human populations." Nat Genet 26:358–361 (2000).
  5. ^ Karafet et al. (2008), Abstract New Binary Polymorphisms Reshape and Increase Resolution of the Human Y-Chromosomal Haplogroup Tree, Genome Research, DOI: 10.1101/gr.7172008
  6. ^ Turi E. King, Emma J. Parkin, Geoff Swinfield, Fulvio Cruciani, Rosaria Scozzari, Alexandra Rosa, Si-Keun Lim, Yali Xue, Chris Tyler-Smith & Mark A. Jobling (March 2007). "Africans in Yorkshire? The deepest-rooting clade of the Y phylogeny within an English genealogy". European Journal of Human Genetics 15 (3): 288–283. doi:10.1038/sj.ejhg.5201771. PMID 17245408.  News article:

[edit] See also

Human Y-chromosome DNA (Y-DNA) haplogroups (by ethnic groups · famous haplotypes)

most recent common Y-ancestor
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A BT
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B CT
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CF DE
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C F D E
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G H IJK
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IJ K
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I J L M NOP S T
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NO P
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N O Q R

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