|Insulin-like growth factor binding protein 7|
|Symbols||; AGM; FSTL2; IBP-7; IGFBP-7; IGFBP-7v; IGFBPRP1; MAC25; PSF; RAMSVPS; TAF|
|RNA expression pattern|
Insulin-like growth factor-binding protein 7 is a protein that in humans is encoded by the IGFBP7 gene. The major function of the protein is the regulation of availability of insulin-like growth factors (IGFs) in tissue as well as in modulating IGF binding to its receptors. IGFBP7 binds to IGF with high affinity. It also stimulates cell adhesion. The protein is implicated in some cancers.
The pre-mRNA of this protein is subject to RNA editing. The two editing sites were previously recorded as single nucleotide polymorphisms in dbSNP.
A to I RNA editing is catalyzed by a family of adenosine deaminases acting on RNA (ADARs) that specifically recognize adenosines within double-stranded regions of pre-mRNAs and deaminate them to inosine.Inosines are recognised as guanosine by the cells translational machinery.There are three members of the ADAR family ADARs 1-3 with ADAR 1 and ADAR 2 being the only enzymatically active members.ADAR3 is thought to have a regulatory role in the brain.ADAR1 and ADAR 2 are widely expressed in tissues while ADAR 3 is restricted to the brain.The double stranded regions of RNA are formed by base-pairing between residues in the close to region of the editing site with residues usually in a neighboring intron but can be an exonic sequence.The region that base pairs with the editing region is known as an Editing Complentary Sequence (ECS). It is thought that the pre-mRNA of IGFBP7 is a substrate for ADAR1 based on the expression spectrum of the editing enzyme.
The pre-mRNA of this protein is edited at two positions.These editing sites occur within the insulin growth factor domain.
There is an Argine (R) to a Glycine (G) substitution at amino acid position 78 of the final protein.
There is a K to R substitiution at amino acid position 95.
The editing complementary sequence (ECS) is located in a region within the coding sequence about 200 base pairs upstream from the editing sites.The ECS forms 140 bp duplex structure. The A to G discrepancies for these two editing sites were confirmed experimentally to be RNA editing by analyzing matched cDNA and genomic dna sequences from the same tissue sample. Intriguingly, those RNAs that do not need an intron sequence to pair with could, in theory, continue to undergo editing as mature mRNA. A third candidate editing site did not show evidence of RNA editing in sequence analysis, which may be an indication that either the RNA editing process is tissue specific, or editing occurs at a low frequency. One other possible explanation is that these edits are related to specific genomic polymorphisms. The editing site also overlaps with an antisense transcript which could also form a double stranded RNA structure creating a suitable substrate for ADARs.
Editing is observed in a wide range of tissues. Editing at the R/G site at amino acid position 95 is very high in the human brain.
The edited sites are found within the insulin growth factor binding domain of IGFBP7 and also Heparin binding domain.This region is also a site for proteolytic cleavage.Structural analysis of the edited sites determined that the two amino acids that corresponded to the edited sites are not directly involved in binding to IGF-1 but are found in regions flanking them. At position 78 in unedited version of the transcript there is an Arginine close to residue valine-49.This Valine is important in hydrophobic interaction of Phenylalanine of IGF-1.A substitution to a Glycine at this position is thought to introduce additional flexibility leading to a change of loop conformation, thereby disrupting the hydrophobic interaction that stabilises the complex. At amino acid position 98 the unedited transcript contains a lysine .This residue makes some non specific interactions via the aliphatic part of the side chain with Glu-38 of IGF-1.In the edited version the position is an arginine.The long side chain of which is thought to be able to maintain these weak interactions
The edited region contains a proposed heparin binding site and is also part of the recognition sequence for proteolytic cleavage.Heparin binding inhibits cell binding and cell adhesion functions of the protein. Cleavage which occurs at amino acid position 97 reduces heparin binding but modulates the growth stimulatory activity of the protein. Since the editing site occurs within this proposed heparin binding region the effects of editing may have implications for heparin binding and proteolytic clevage and therefore have other affects downstream.Since the protein has been implicated in these processes it is believed editing might effect apoptosis, regulation of cell growth and angiogenesis.
Functions in Learning and Memory
A study at the European Neuroscience Institute-Goettingen (Germany) found that fear extinction-induced IGF2/IGFBP7 signalling promotes the survival of 17–19-day-old newborn hippocampal neurons. This suggests that therapeutic strategies that enhance IGF2 signalling and adult neurogenesis might be suitable to treat diseases linked to excessive fear memory such as PTSD. The same group has found that IGFBP7 levels are increased in Alzheimer's disease and regulated via DNA methylation. Elevation of IGFBP7 in wild type mice causes memory impairment. Blocking IGFBP7 function in mice that develop Alzheimer's disease-like memory impairment restores memory function. These data suggest that IGFBP7 is a critical regulator of memory consolidation and might be used as biomarker for Alzheimer's disease. Targeting IGFBP7 could be a novel therapeutic avenue for the treatment of Alzheimer's disease patients.
- Murphy M, Pykett M, Harnish P, Zang K, George D (Dec 1993). "Identification and characterization of genes differentially expressed in meningiomas". Cell Growth Differ 4 (9): 715–22. PMID 7694637.
- Yamauchi T, Umeda F, Masakado M, Isaji M, Mizushima S, Nawata H (Nov 1994). "Purification and molecular cloning of prostacyclin-stimulating factor from serum-free conditioned medium of human diploid fibroblast cells". Biochem J 303 (2): 591–8. PMC 1137368. PMID 7980422.
- "Entrez Gene: IGFBP7 insulin-like growth factor binding protein 7".
- Oh Y, Nagalla S, Yamanaka Y, Kim H, Wilson E, Rosenfeld R (November 1996). "Synthesis and characterization of insulin-like growth factor-binding protein (IGFBP)-7. Recombinant human mac25 protein specifically binds IGF-I and -II". J. Biol. Chem. 271 (48): 30322–5. doi:10.1074/jbc.271.48.30322. PMID 8939990.
- Gommans W, Tatalias N, Sie C, Dupuis D, Vendetti N, Smith L et al. (October 2008). "Screening of human SNP database identifies recoding sites of A-to-I RNA editing". RNA 14 (10): 2074–85. doi:10.1261/rna.816908. PMC 2553741. PMID 18772245.
- Ahmed S, Yamamoto K, Sato Y, Ogawa T, Herrmann A, Higashi S et al. (October 2003). "Proteolytic processing of IGFBP-related protein-1 (TAF/angiomodulin/mac25) modulates its biological activity". Biochem. Biophys. Res. Commun. 310 (2): 612–8. doi:10.1016/j.bbrc.2003.09.058. PMID 14521955.
- Wilson E, Oh Y, Hwa V, Rosenfeld R (September 2001). "Interaction of IGF-binding protein-related protein 1 with a novel protein, neuroendocrine differentiation factor, results in neuroendocrine differentiation of prostate cancer cells". J. Clin. Endocrinol. Metab. 86 (9): 4504–11. doi:10.1210/jc.86.9.4504. PMID 11549700.
- Levanon E, Hallegger M, Kinar Y, Shemesh R, Djinovic-Carugo K, Rechavi G et al. (2005). "Evolutionarily conserved human targets of adenosine to inosine RNA editing". Nucleic Acids Res. 33 (4): 1162–8. doi:10.1093/nar/gki239. PMC 549564. PMID 15731336.
- Hartner J, Schmittwolf C, Kispert A, Müller A, Higuchi M, Seeburg P (February 2004). "Liver disintegration in the mouse embryo caused by deficiency in the RNA-editing enzyme ADAR1". J. Biol. Chem. 279 (6): 4894–902. doi:10.1074/jbc.M311347200. PMID 14615479.
- Kuang Z, Yao S, Keizer D, Wang C, Bach L, Forbes B et al. (December 2006). "Structure, dynamics and heparin binding of the C-terminal domain of insulin-like growth factor-binding protein-2 (IGFBP-2)". J. Mol. Biol. 364 (4): 690–704. doi:10.1016/j.jmb.2006.09.006. PMID 17020769.
- Kishibe J, Yamada S, Okada Y, Sato J, Ito A, Miyazaki K et al. (May 2000). "Structural requirements of heparan sulfate for the binding to the tumor-derived adhesion factor/angiomodulin that induces cord-like structures to ECV-304 human carcinoma cells". J. Biol. Chem. 275 (20): 15321–9. doi:10.1074/jbc.275.20.15321. PMID 10809767.
- Agis-Balboa R, Arcos-Diaz D, Wittnam J, Govindarajan N, Blom K, Burkhardt S et al. (August 2011). "A hippocampal insulin-growth factor 2 pathway regulates the extinction of fear memories". EMBO J 30 (19): 4071–83. doi:10.1038/emboj.2011.293. PMC 3209781. PMID 21873981.
- Agbemenyah H, Agis-Balboa R, Burkhardt S, Delalle I, Fischer A (2013). "Insulin growth factor binding protein 7 is a novel target to treat dementia". Neurobiol Dis 62: 135–43. doi:10.1016/j.nbd.2013.09.011. PMID 24075854.
- Swisshelm K, Ryan K, Tsuchiya K, Sager R (1995). "Enhanced expression of an insulin growth factor-like binding protein (mac25) in senescent human mammary epithelial cells and induced expression with retinoic acid.". Proc. Natl. Acad. Sci. U.S.A. 92 (10): 4472–6. doi:10.1073/pnas.92.10.4472. PMC 41966. PMID 7538673.
- Oh Y, Nagalla S, Yamanaka Y, Kim H, Wilson E, Rosenfeld R (1997). "Synthesis and characterization of insulin-like growth factor-binding protein (IGFBP)-7. Recombinant human mac25 protein specifically binds IGF-I and -II.". J. Biol. Chem. 271 (48): 30322–5. doi:10.1074/jbc.271.48.30322. PMID 8939990.
- Wilson E, Oh Y, Rosenfeld R (1997). "Generation and characterization of an IGFBP-7 antibody: identification of 31kD IGFBP-7 in human biological fluids and Hs578T human breast cancer conditioned media.". J. Clin. Endocrinol. Metab. 82 (4): 1301–3. doi:10.1210/jc.82.4.1301. PMID 9100611.
- Sekiguchi N, Umeda F, Masakado M, Ono Y, Hashimoto T, Nawata H (1997). "Immunohistochemical study of prostacyclin-stimulating factor (PSF) in the diabetic and atherosclerotic human coronary artery.". Diabetes 46 (10): 1627–32. doi:10.2337/diabetes.46.10.1627. PMID 9313760.
- Yamanaka Y, Wilson E, Rosenfeld R, Oh Y (1998). "Inhibition of insulin receptor activation by insulin-like growth factor binding proteins.". J. Biol. Chem. 272 (49): 30729–34. doi:10.1074/jbc.272.49.30729. PMID 9388210.
- Sato J, Hasegawa S, Akaogi K, Yasumitsu H, Yamada S, Sugahara K et al. (1999). "Identification of cell-binding site of angiomodulin (AGM/TAF/Mac25) that interacts with heparan sulfates on cell surface.". J. Cell. Biochem. 75 (2): 187–95. doi:10.1002/(SICI)1097-4644(19991101)75:2<187::AID-JCB1>3.0.CO;2-R. PMID 10502291.
- Girard J, Baekkevold E, Yamanaka T, Haraldsen G, Brandtzaeg P, Amalric F (1999). "Heterogeneity of endothelial cells: the specialized phenotype of human high endothelial venules characterized by suppression subtractive hybridization.". Am. J. Pathol. 155 (6): 2043–55. doi:10.1016/S0002-9440(10)65523-X. PMC 1866921. PMID 10595934.
- Degeorges A, Wang F, Frierson H, Seth A, Sikes R (2000). "Distribution of IGFBP-rP1 in normal human tissues.". J. Histochem. Cytochem. 48 (6): 747–54. doi:10.1177/002215540004800603. PMID 10820148.
- Kato M (2000). "A secreted tumor-suppressor, mac25, with activin-binding activity.". Mol. Med. 6 (2): 126–35. PMC 1949932. PMID 10859029.
- Allen J, Bloor C, Kedia R, Knight R, Spiteri M (2001). "Expression of growth hormone-releasing factor, growth hormone, insulin-like growth factor-1 and its binding proteins in human lung.". Neuropeptides 34 (2): 98–107. doi:10.1054/npep.2000.0802. PMID 10985926.
- Wilson E, Oh Y, Hwa V, Rosenfeld R (2001). "Interaction of IGF-binding protein-related protein 1 with a novel protein, neuroendocrine differentiation factor, results in neuroendocrine differentiation of prostate cancer cells.". J. Clin. Endocrinol. Metab. 86 (9): 4504–11. doi:10.1210/jc.86.9.4504. PMID 11549700.
- Wilson H, Birnbaum R, Poot M, Quinn L, Swisshelm K (2002). "Insulin-like growth factor binding protein-related protein 1 inhibits proliferation of MCF-7 breast cancer cells via a senescence-like mechanism.". Cell Growth Differ. 13 (5): 205–13. PMID 12065244.
- Usui T, Murai T, Tanaka T, Yamaguchi K, Nagakubo D, Lee C et al. (2003). "Characterization of mac25/angiomodulin expression by high endothelial venule cells in lymphoid tissues and its identification as an inducible marker for activated endothelial cells.". Int. Immunol. 14 (11): 1273–82. doi:10.1093/intimm/dxf102. PMID 12407018.
- Plymate S, Haugk K, Sprenger C, Nelson P, Tennant M, Zhang Y et al. (2003). "Increased manganese superoxide dismutase (SOD-2) is part of the mechanism for prostate tumor suppression by Mac25/insulin-like growth factor binding-protein-related protein-1.". Oncogene 22 (7): 1024–34. doi:10.1038/sj.onc.1206210. PMID 12592389.
- Domínguez F, Avila S, Cervero A, Martín J, Pellicer A, Castrillo J et al. (2003). "A combined approach for gene discovery identifies insulin-like growth factor-binding protein-related protein 1 as a new gene implicated in human endometrial receptivity.". J. Clin. Endocrinol. Metab. 88 (4): 1849–57. doi:10.1210/jc.2002-020724. PMID 12679483.
- López-Bermejo A, Khosravi J, Corless C, Krishna R, Diamandi A, Bodani U et al. (2003). "Generation of anti-insulin-like growth factor-binding protein-related protein 1 (IGFBP-rP1/MAC25) monoclonal antibodies and immunoassay: quantification of IGFBP-rP1 in human serum and distribution in human fluids and tissues.". J. Clin. Endocrinol. Metab. 88 (7): 3401–8. doi:10.1210/jc.2002-021315. PMID 12843194.
- Nagakubo D, Murai T, Tanaka T, Usui T, Matsumoto M, Sekiguchi K et al. (2003). "A high endothelial venule secretory protein, mac25/angiomodulin, interacts with multiple high endothelial venule-associated molecules including chemokines.". J. Immunol. 171 (2): 553–61. doi:10.4049/jimmunol.171.2.553. PMID 12847218.