Proteopedia is a wiki, 3D encyclopedia of proteins and other molecules. The site contains a page for every entry in the Protein Data Bank (>100,000 pages), as well as pages that are more descriptive of protein structures in general such as acetylcholinesterase,hemoglobin, and the photosystem II with a Jmol view that highlights functional sites and ligands. It employs a scene-authoring tool so that users do not have to learn Jmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in Jmol. A web browser is all that is needed to access the site and the 3D information, i.e. there are no downloadable viewers required to install and run.
Proteopedia was the winner of the 2010 award for the best Web-site by The Scientist magazine.
^Martz E (2009). "Proteopedia.Org: a scientific "Wiki" bridging the rift between 3D structure and function of biomacromolecules". Biopolymers92 (1): 76–7. doi:10.1002/bip.21126. PMID19117028.
^Hodis E, Prilusky J, Sussman JL (2010). "Proteopedia: A collaborative, virtual 3D web-resource for protein and biomolecule structure and function". Biochem. Mol. Biol. Educ.38 (5): 341–2. doi:10.1002/bmb.20431.