UBE2L3
From Wikipedia, the free encyclopedia
Ubiquitin-conjugating enzyme E2 L3 is a protein that in humans is encoded by the UBE2L3 gene.[1][2][3]
The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes (E1s), ubiquitin-conjugating enzymes (E2s) and ubiquitin-protein ligases (E3s). This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. This enzyme is demonstrated to participate in the ubiquitination of p53, c-Fos, and the NF-κB precursor p105 in vitro. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.[3]
[edit] Interactions
UBE2L3 has been shown to interact with UBOX5,[4] ARIH1,[5][6][7] Cbl gene,[8][9][10] UBE3A[11][12][13] and NEDD4.[11][14]
[edit] References
- ^ Moynihan TP, Ardley HC, Leek JP, Thompson J, Brindle NS, Markham AF, Robinson PA (Oct 1996). "Characterization of a human ubiquitin-conjugating enzyme gene UBE2L3". Mamm Genome 7 (7): 520–5. doi:10.1007/s003359900155. PMID 8672131.
- ^ Moynihan TP, Cole CG, Dunham I, O'Neil L, Markham AF, Robinson PA (Sep 1998). "Fine-mapping, genomic organization, and transcript analysis of the human ubiquitin-conjugating enzyme gene UBE2L3". Genomics 51 (1): 124–7. doi:10.1006/geno.1998.5257. PMID 9693040.
- ^ a b "Entrez Gene: UBE2L3 ubiquitin-conjugating enzyme E2L 3". http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=7332.
- ^ Pringa, E; Martinez-Noel G, Muller U, Harbers K (Jun. 2001). "Interaction of the ring finger-related U-box motif of a nuclear dot protein with ubiquitin-conjugating enzymes". J. Biol. Chem. (United States) 276 (22): 19617–23. doi:10.1074/jbc.M100192200. ISSN 0021-9258. PMID 11274149.
- ^ Tan, Nancy G S; Ardley Helen C, Scott Gina B, Rose Stephen A, Markham Alexander F, Robinson Philip A (Nov. 2003). "Human homologue of ariadne promotes the ubiquitylation of translation initiation factor 4E homologous protein, 4EHP". FEBS Lett. (Netherlands) 554 (3): 501–4. doi:10.1016/S0014-5793(03)01235-3. ISSN 0014-5793. PMID 14623119.
- ^ Moynihan, T P; Ardley H C, Nuber U, Rose S A, Jones P F, Markham A F, Scheffner M, Robinson P A (Oct. 1999). "The ubiquitin-conjugating enzymes UbcH7 and UbcH8 interact with RING finger/IBR motif-containing domains of HHARI and H7-AP1". J. Biol. Chem. (UNITED STATES) 274 (43): 30963–8. doi:10.1074/jbc.274.43.30963. ISSN 0021-9258. PMID 10521492.
- ^ Ardley, H C; Tan N G, Rose S A, Markham A F, Robinson P A (Jun. 2001). "Features of the parkin/ariadne-like ubiquitin ligase, HHARI, that regulate its interaction with the ubiquitin-conjugating enzyme, Ubch7". J. Biol. Chem. (United States) 276 (22): 19640–7. doi:10.1074/jbc.M011028200. ISSN 0021-9258. PMID 11278816.
- ^ Yokouchi, M; Kondo T, Houghton A, Bartkiewicz M, Horne W C, Zhang H, Yoshimura A, Baron R (Oct. 1999). "Ligand-induced ubiquitination of the epidermal growth factor receptor involves the interaction of the c-Cbl RING finger and UbcH7". J. Biol. Chem. (UNITED STATES) 274 (44): 31707–12. doi:10.1074/jbc.274.44.31707. ISSN 0021-9258. PMID 10531381.
- ^ Zheng, N; Wang P, Jeffrey P D, Pavletich N P (Aug. 2000). "Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases". Cell (UNITED STATES) 102 (4): 533–9. doi:10.1016/S0092-8674(00)00057-X. ISSN 0092-8674. PMID 10966114.
- ^ Wong, Esther Sook Miin; Fong Chee Wai, Lim Jormay, Yusoff Permeen, Low Boon Chuan, Langdon Wallace Y, Guy Graeme R (Sep. 2002). "Sprouty2 attenuates epidermal growth factor receptor ubiquitylation and endocytosis, and consequently enhances Ras/ERK signalling". EMBO J. (England) 21 (18): 4796–808. doi:10.1093/emboj/cdf493. ISSN 0261-4189. PMC 126289. PMID 12234920. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=126289.
- ^ a b Anan, T; Nagata Y, Koga H, Honda Y, Yabuki N, Miyamoto C, Kuwano A, Matsuda I, Endo F, Saya H, Nakao M (Nov. 1998). "Human ubiquitin-protein ligase Nedd4: expression, subcellular localization and selective interaction with ubiquitin-conjugating enzymes". Genes Cells (ENGLAND) 3 (11): 751–63. doi:10.1046/j.1365-2443.1998.00227.x. ISSN 1356-9597. PMID 9990509.
- ^ Nuber, U; Schwarz S, Kaiser P, Schneider R, Scheffner M (Feb. 1996). "Cloning of human ubiquitin-conjugating enzymes UbcH6 and UbcH7 (E2-F1) and characterization of their interaction with E6-AP and RSP5". J. Biol. Chem. (UNITED STATES) 271 (5): 2795–800. doi:10.1074/jbc.271.5.2795. ISSN 0021-9258. PMID 8576257.
- ^ Huang, L; Kinnucan E, Wang G, Beaudenon S, Howley P M, Huibregtse J M, Pavletich N P (Nov. 1999). "Structure of an E6AP-UbcH7 complex: insights into ubiquitination by the E2-E3 enzyme cascade". Science (UNITED STATES) 286 (5443): 1321–6. doi:10.1126/science.286.5443.1321. ISSN 0036-8075. PMID 10558980.
- ^ Bruce, M Christine; Kanelis Voula, Fouladkou Fatemeh, Debonneville Anne, Staub Olivier, Rotin Daniela (Oct. 2008). "Regulation of Nedd4-2 self-ubiquitination and stability by a PY motif located within its HECT-domain". Biochem. J. (England) 415 (1): 155–63. doi:10.1042/BJ20071708. PMID 18498246.
[edit] Further reading
- Blumenfeld N, Gonen H, Mayer A, et al. (1994). "Purification and characterization of a novel species of ubiquitin-carrier protein, E2, that is involved in degradation of non-"N-end rule" protein substrates.". J. Biol. Chem. 269 (13): 9574–81. PMID 8144544.
- Robinson PA, Leek JP, Thompson J, et al. (1996). "A human ubiquitin conjugating enzyme, L-UBC, maps in the Alzheimer's disease locus on chromosome 14q24.3.". Mamm. Genome 6 (10): 725–31. doi:10.1007/BF00354295. PMID 8563171.
- Nuber U, Schwarz S, Kaiser P, et al. (1996). "Cloning of human ubiquitin-conjugating enzymes UbcH6 and UbcH7 (E2-F1) and characterization of their interaction with E6-AP and RSP5.". J. Biol. Chem. 271 (5): 2795–800. doi:10.1074/jbc.271.5.2795. PMID 8576257.
- Kumar S, Kao WH, Howley PM (1997). "Physical interaction between specific E2 and Hect E3 enzymes determines functional cooperativity.". J. Biol. Chem. 272 (21): 13548–54. doi:10.1074/jbc.272.21.13548. PMID 9153201.
- Anan T, Nagata Y, Koga H, et al. (1999). "Human ubiquitin-protein ligase Nedd4: expression, subcellular localization and selective interaction with ubiquitin-conjugating enzymes.". Genes Cells 3 (11): 751–63. doi:10.1046/j.1365-2443.1998.00227.x. PMID 9990509.
- Martinez-Noel G, Niedenthal R, Tamura T, Harbers K (1999). "A family of structurally related RING finger proteins interacts specifically with the ubiquitin-conjugating enzyme UbcM4.". FEBS Lett. 454 (3): 257–61. doi:10.1016/S0014-5793(99)00823-6. PMID 10431818.
- Moynihan TP, Ardley HC, Nuber U, et al. (1999). "The ubiquitin-conjugating enzymes UbcH7 and UbcH8 interact with RING finger/IBR motif-containing domains of HHARI and H7-AP1.". J. Biol. Chem. 274 (43): 30963–8. doi:10.1074/jbc.274.43.30963. PMID 10521492.
- Yokouchi M, Kondo T, Houghton A, et al. (1999). "Ligand-induced ubiquitination of the epidermal growth factor receptor involves the interaction of the c-Cbl RING finger and UbcH7.". J. Biol. Chem. 274 (44): 31707–12. doi:10.1074/jbc.274.44.31707. PMID 10531381.
- Huang L, Kinnucan E, Wang G, et al. (1999). "Structure of an E6AP-UbcH7 complex: insights into ubiquitination by the E2-E3 enzyme cascade.". Science 286 (5443): 1321–6. doi:10.1126/science.286.5443.1321. PMID 10558980.
- Ardley HC, Moynihan TP, Markham AF, Robinson PA (2000). "Promoter analysis of the human ubiquitin-conjugating enzyme gene family UBE2L1-4, including UBE2L3 which encodes UbcH7.". Biochim. Biophys. Acta 1491 (1–3): 57–64. PMID 10760570.
- Zheng N, Wang P, Jeffrey PD, Pavletich NP (2000). "Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases". Cell 102 (4): 533–9. doi:10.1016/S0092-8674(00)00057-X. PMID 10966114.
- Zhang Y, Gao J, Chung KK, et al. (2001). "Parkin functions as an E2-dependent ubiquitin- protein ligase and promotes the degradation of the synaptic vesicle-associated protein, CDCrel-1". Proc. Natl. Acad. Sci. U.S.A. 97 (24): 13354–9. doi:10.1073/pnas.240347797. PMC 27228. PMID 11078524. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=27228.
- Niwa J, Ishigaki S, Doyu M, et al. (2001). "A novel centrosomal ring-finger protein, dorfin, mediates ubiquitin ligase activity". Biochem. Biophys. Res. Commun. 281 (3): 706–13. doi:10.1006/bbrc.2001.4414. PMID 11237715.
- Pringa E, Martinez-Noel G, Muller U, Harbers K (2001). "Interaction of the ring finger-related U-box motif of a nuclear dot protein with ubiquitin-conjugating enzymes". J. Biol. Chem. 276 (22): 19617–23. doi:10.1074/jbc.M100192200. PMID 11274149.
- Ardley HC, Tan NG, Rose SA, et al. (2001). "Features of the parkin/ariadne-like ubiquitin ligase, HHARI, that regulate its interaction with the ubiquitin-conjugating enzyme, Ubch7". J. Biol. Chem. 276 (22): 19640–7. doi:10.1074/jbc.M011028200. PMID 11278816.
- Obin M, Lee BY, Meinke G, et al. (2003). "Ubiquitylation of the transducin betagamma subunit complex. Regulation by phosducin". J. Biol. Chem. 277 (46): 44566–75. doi:10.1074/jbc.M205308200. PMID 12215439.
- Wong ES, Fong CW, Lim J, et al. (2002). "Sprouty2 attenuates epidermal growth factor receptor ubiquitylation and endocytosis, and consequently enhances Ras/ERK signalling". EMBO J. 21 (18): 4796–808. doi:10.1093/emboj/cdf493. PMC 126289. PMID 12234920. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=126289.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=139241.
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PDB gallery
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1c4z: STRUCTURE OF E6AP: INSIGHTS INTO UBIQUITINATION PATHWAY
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1fbv: STRUCTURE OF A CBL-UBCH7 COMPLEX: RING DOMAIN FUNCTION IN UBIQUITIN-PROTEIN LIGASES
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Chaperones/
protein folding |
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Hsp10/GroES (Early pregnancy factor) · Hsp27 · Hsp47 · HSP60/GroEL
Hsp40/DnaJ (A1, A2, A3, B1, B2, B11, B4, B6, B9, C1, C3, C5, C6, C7, C10, C11, C13, C14, C19)
Hsp70 (1A, 1B, 1L, 2, 4, 4L, 5, 6, 7, 8, 9, 12A, 14)
Hsp90 ( α1, α2, β, ER, TRAP1)
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Other
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| Protein targeting |
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| Ubiquitin |
E1 Ubiquitin-activating enzyme (UBA1, UBA2, UBA3, UBA5, UBA6, UBA7, ATG7, NAE1, SAE1)
E2 Ubiquitin-conjugating enzyme (A • B • C • D1, D2, D3 • E1, E2, E3 • G1, G2 • H • I • J1, J2 • K • L1, L2, L3, L4, L6 • M • N • O • Q1, Q2 • R1 (CDC34), R2 • S • V1, V2 • Z)
E3 Ubiquitin ligase (VHL, Cullin, CBL, MDM2, FANCL, UBR1)
Deubiquitinating enzyme: Ataxin 3 • USP6 • CYLD
ATG3 • BIRC6 • UFC1
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see also posttranslational modification disorders
B bsyn: dna (repl, cycl, reco, repr) · tscr (fact, tcrg, nucl, rnat, rept, ptts) · tltn (risu, pttl, nexn) · dnab, rnab/runp · stru (domn, 1°, 2°, 3°, 4°)
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