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This WikiProject is believed to be semi-active. Activity has slowed down in the last few months. If you are not currently a member of the project, please consider joining it and/or its parent project WikiProject Biology to help. See the WikiProject Guide for advice on reviving an inactive WikiProject.
Feel free to remove this tag if activity resumes or if this tag was placed in error. If almost no activity occurs in this Wikiproject, consider replacing this tag with {{WikiProject status|Inactive}}.
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Some Wikipedians have formed a project to better organize information in articles related to Cell Signaling. This page and its subpages contain their suggestions; it is hoped that this project will help to focus the efforts of other Wikipedians. If you would like to help, please inquire on the talk page and see the to-do list there.
For more information on WikiProjects, please see Wikipedia:WikiProject and Wikipedia:WikiProject/Best practices.
WikiProject on Cell Signaling
This project is dedicated to improving and organising the Wikipedia articles on cell signaling to provide a convenient and reliable reference of the known signal transduction pathways. It covers the pathway pages and individual protein pages related to them.
- Creating comprehensive articles for each known cell signaling pathway
- Organising cell signaling articles with navigation boxes like these: Wikipedia:WikiProject Molecular and Cellular Biology#Protein topics navigation boxes.
- Organising and creating articles on notable proteins involved in signaling pathways.
- Providing each pathway with a clear diagram of its structure.
- Clearly citing sources, especially for active research topics
[edit] Target audience
- Introduction to pathway articles should make minimal use of jargon and be kept relatively simple
- Subsections and protein pages can be more technical
[edit] Parentage
This is a daughter project of WikiProject Molecular and Cellular Biology
[edit] Similar WikiProjects
WikiProject Clinical medicine and WikiProject Drugs may be relevant to this project.
[edit] Guidelines
[edit] Open Tasks
[edit] Departments
[edit] Participants
If you'd like to join the project, please add your name here. If you'd really like to contibute, but don't have much time, you can still participate by adding your name to the Guestlist.
| Name |
Talk page |
Status |
Special interests |
| Rrten00 |
Talk |
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EGFR,ErbB2, and MAPK, along with some knowledge of AKT and p53/p21 |
| George Damoulakis |
Talk |
Casually active |
Small G proteins, PI 3-kinase signalling, immunology and neutrophil biology |
| Peter Znamenskiy |
Talk |
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Cell culture and adult stem cells |
| F Guesdon |
Talk |
Casually active |
Molecular evolution in the Innate Immune system, particularly TLRs (Toll-like Receptor) and TAK1 (MAP3K7) |
| Rockpocket |
Talk |
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G-protein coupled receptors |
| David Iberri |
Talk |
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Embryogenesis (especially nervous system development) |
| John Schmidt |
Talk |
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illustrations |
| Gacggt |
Talk |
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Skeletal Muscle biology, Akt pathway, NF-kappaB pathway, some GPCRs, Neurotrophins, MuSK, agrin, Neuromuscular junction, etc |
| Kohlasz |
Talk |
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Chemotaxis |
| EquationDoc |
Talk |
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Pathways involved in cancer prevention and formation |
| JE.at.UWO |
Talk |
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Immunology, development, endocrinology and reproductive physiology. |
| Biochemza |
Talk |
Casually active |
Immunology, neutrophils, tyrosine kinase signaling, calcium signaling |
| cyclopamine |
Talk |
Casually active |
Hedgehog pathway, Adult stem cells and cancer |
| Wisdom89 |
Talk |
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Phospholipase, small and large G proteins |
| David.Throop |
Talk |
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Working on Eicosanoid, Nonclassic eicosanoid and related articles. I am trying to get Eicosanoid up to FA status. |
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| Jmcclare |
Talk |
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Neurochemistry, G proteins, ion channels, pharmacology |
| Snellios |
Talk |
Casually active |
Knowledgeable on G proteins, ion channels, pharmacology (especially CNS pharmacology), calcium signaling. |
| ACGGGG |
Talk |
Casually active |
NF-kappaB, MAPKs, innate immunity |
| Stephen Helms |
Talk |
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G proteins,phospholipase C,protein kinase C,calcium,scaffolding proteins,ion channels, and signaling organization |
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| davebridges |
talk |
Casually active |
G proteins, GAPVD1, protein phosphorylation, pi3p |
| Subcellular |
talk |
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Ion channels (particularly LGICs), calcium, GPCRs |
| JustAnotherKinase |
talk |
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[Cell physiology, particularly in immunology and cardiovascular sciences. |
| Rod57 |
talk |
Casually active |
PI3K/AKT/mTOR pathway, Pathways involved in cancer prevention and formation |
[edit] Guestlist
If you'd really like to contribute, but don't have much time, you can still participate by adding your name to the Guestlist.
| Name |
Special interests
|
| Tyciol (talk · contribs) |
Currently I'm studying biology but don't know enough about cell signaling to be an adequate participant, will once I study it in the future. |
| Jbarin (talk · contribs) |
Immunology, autoimmune disease, T cells, cytokines |
| Miguel AngeloR (talk · contribs) |
Im a student of Celular and Molecular Biology at the New University of Lisbon, I would like to contribute to this page seen as it is the main topic on my course. I so far have complete my Celular biology class in which most of this subject was discussed. I do not know much about how to contribute to wiki and work with other people on the same page, so if would like my help on any subject please contact me and informe about what i need to do. Tanks |
| Xarus |
Undergraduate student of Department of Biology in Yonsei Unv. Also working as a intern student in Glycomics lab. O-GlcNAc, Cell signaling |
| aqua112233 (talk · contribs) |
Immunology, cytokines |
[edit] Article Structure
Proposed structure of a pathway article:
- General introduction - keep it simple and clear
- History/Discovery - discovery, seminal papers
- Mechanism - the proteins involved and how they interact.
- Role - the role of the pathway
- Human disease - alternatively this can be incorporated into the previous section
- Current research - recent advances, future directions
For individual proteins, see suggestions in Wikipedia:WikiProject_Molecular_and_Cellular_Biology#Structures
Proposed scheme for pathway diagrams is described here. Please do comment and contribute.
[edit] Hierarchy definition
No classification of this project has been defined.
[edit] Projects
Cell signaling and signal transduction is a very broad field. This section breaks this WikiProject down into smaller, more manageable "mini" projects, with a more specific subject set. Please feel free to add a mini project according to your expertise, or jump in and help on a specific mini project.
- Tyrosine kinase signaling.
[edit] Adopt an article
Similar to the Collaboration of the week, but on a smaller scale, you might want to "adopt" an article. This would involve doing the research, writing, and picture-taking (if possible) for either a non-existent article or a stub. Of course, everyone else can still edit an adopted article, and you can work on other things too, but the idea is to find a focus for a while, to try and build up the number of quality articles the Project has produced.
[edit] General strategy and discussion forums
[edit] Templates
[edit] Infoboxes
To do
[edit] WikiProject Banners
{{Template:Cell Signaling Project|class=???|importance=???}}
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This article is part of WikiProject Cell Signaling, an attempt to better organise information in articles related to cell signaling and signal transduction. If you would like to participate, you can edit the article attached to this page, or visit the Cell Signaling WikiProject project, where you can join the project and/or contribute to the discussion.
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This article has not yet received a rating on the project's quality scale. |
| ??? |
This article has not yet received a rating on the project's importance scale. |
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[edit] NavBoxes
[edit] General
{{Template:Cell_signaling}}
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| Signaling pathways |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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[edit] Specific pathways
{{Template:Lipid_signaling}}
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| Extracellular lipid ligands |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:TGF beta signaling}}
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| TGF beta superfamily of ligands |
TGF beta family (TGF-β1, TGF-β2, TGF-β3)
Bone morphogenetic proteins (BMP2, BMP3, BMP4, BMP5, BMP6, BMP7, BMP8a, BMP8b, BMP10 , BMP15)
Growth differentiation factors (GDF1, GDF2, GDF3, GDF5, GDF6, GDF7, Myostatin/GDF8, GDF9, GDF10, GDF11, GDF15)
Other ( Activin and inhibin, Anti-müllerian hormone, Nodal)
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TGF beta receptors
(Activin, BMP) |
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| Transducers/SMAD |
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| Ligand inhibitors |
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| Coreceptors |
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| Other |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Calcium signaling}}
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| Cell membrane |
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Intracellular signaling
& calc. regulation |
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Calcium-binding
protein domains |
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| Extracellular ligands |
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| Calcium-binding proteins |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:MAP kinase activation}}
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MAP kinase activation
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| Initiation |
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| MAP kinase kinase kinase (MAP3K or MKKK) |
MAP kinase kinase kinases ( MAP3K1, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K8) RAFs ( ARAF, BRAF, KSR1, KSR2) MLKs ( MAP3K12, MAP3K13, MAP3K9, MAP3K10, MAP3K11, MAP3K7, ZAK) CDC7
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| MAP kinase kinase (MAP2K or MKK) |
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| MAP kinase |
Extracellular signal-regulated ( MAPK1, MAPK3, MAPK4, MAPK6, MAPK7, MAPK12, MAPK15), C-Jun N-terminal ( MAPK8, MAPK9, MAPK10), P38 mitogen-activated protein ( MAPK11, MAPK13, MAPK14)
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| Phosphatase |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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[edit] Signaling molecules
{{Template:Signaling proteins}}
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| Fibroblast |
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| EGF-like domain |
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| TGFβ pathway |
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| Insulin-like |
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| Platelet-derived |
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| Vascular endothelial |
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| Other |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Cytokines}}
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Type I
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receptor
subunit)
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IFNA1, IFNA2, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA21, IFNB1, IFNK, IFNW1
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Other
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By function/
cell |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Serine/threonine-specific protein kinases}}
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LATS1, LATS2, MAST1, MAST2, STK38, STK38L, CIT, ROCK1, SGK, SGK2, SGK3, Protein kinase B ( AKT1, AKT2, AKT3), Ataxia telangiectasia mutated, Mammalian target of rapamycin, EIF-2 kinases ( PKR, HRI, EIF2AK3, EIF2AK4), Wee1 ( WEE1)
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Protein kinase C, Protein kinase Cζ, PKC alpha, PRKCB1, PRKCD, PRKCE, PRKCH, PRKCG, PRKCI, PRKCQ, Protein kinase N1, PKN2, PKN3,
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BRSK2, CAMK1, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, MLCK, CASK, CHEK1, CHEK2, DAPK1, DAPK2, DAPK3, STK11, MAPKAPK2, MAPKAPK3, MAPKAPK5, MARK1, MARK2, MARK3, MARK4, MELK, MKNK1, MKNK2, NUAK1, NUAK2, OBSCN, PASK, PHKG1, PHKG2, PIM1, PIM2, PKD1, PRKD2, PRKD3, PSKH1, SNF1LK2, KIAA0999, STK40, SNF1LK, SNRK, SPEG, TSSK2, Kalirin, TRIB1, TRIB2, TRIB3, TRIO, Titin, DCLK1
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CDK1, CDK2, CDKL2, CDK3, CDK4, CDK5, CDKL5, CDK6, CDK7, CDK8, CDK9, CDK10, CDC2L5, CRKRS, PCTK1, PCTK2, PCTK3, PFTK1, CDC2L1
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Extracellular signal-regulated ( MAPK1, MAPK3, MAPK4, MAPK6, MAPK7, MAPK12, MAPK15), C-Jun N-terminal ( MAPK8, MAPK9, MAPK10), P38 mitogen-activated protein ( MAPK11, MAPK13, MAPK14)
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MAP kinase kinase kinases ( MAP3K1, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K8) RAFs ( ARAF, BRAF, KSR1, KSR2), MLKs ( MAP3K12, MAP3K13, MAP3K9, MAP3K10, MAP3K11, MAP3K7, ZAK), CDC7, MAP3K14
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Bone morphogenetic protein receptors ( BMPR1, BMPR1A, BMPR1B, BMPR2), ACVR1, ACVR1B, ACVR1C, ACVR2A, ACVR2B, ACVRL1, Anti-Müllerian hormone receptor
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{{Template:Kinases}}
{{Template:Tyrosine kinases}}
{{Template:Protein tyrosine phosphatases}}
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| Class I |
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Classical PTPs
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Receptor type PTPs (PTPRA, PTPRB, PTPRC, PTPRD, PTPRE, PTPRF, PTPRG, PTPRH, PTPRJ, PTPRK, PTPRM, PTPRN, PTPRN2, PTPRO, PTPRQ, PTPRR, PTPRS, PTPRT, PTPRU, PTPRZ1, PTPRZ2)
Non receptor type PTPs ( PTPN1, PTPN2, PTPN3, PTPN4, PTPN5, PTPN6, PTPN7, PTPN9, PTPN11, PTPN12, PTPN13, PTPN14, PTPN18, PTPN20, PTPN21, PTPN22, PTPN23
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MAPK phosphatases (MKPs) (DUSP1, DUSP2, DUSP4, DUSP5, DUSP6, DUSP7, DUSP8, DUSP9, DUSP10, DUSP16, MK-STYX)
Slingshots (SSH1, SSH2, SSH3)
PRLs (PTP4A1, PTP4A2, PTP4A3)
CDC14s (CDC14A, CDC14B, CDKN3, PTP9Q22)
Atypical DSPs (DUSP3, DUSP11, DUSP12, DUSP13A, DUSP13B, DUSP14, DUSP15, DUSP18, DUSP19, DUSP21, DUSP22, DUSP23, DUSP24, DUSP25, DUSP26, DUSP27, EMP2A, RNGTT, STYX)
Phosphatase and tensin homologs (PTENs) (PTEN, TPIP, TPTE, TNS, TENC1)
Myotubularins ( MTM1, MTMR2, MTMR3, MTMR4, MTMR5, MTMR6, MTMR7, MTMR8, MTMR9, MTMR10, MTMR11, MTMR12, MTMR13, MTMR14, MTMR15)
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| Class II |
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| Class III |
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| Class IV |
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[edit] Receptors
{{Template:Receptor agonists and antagonists}}
{{Template:T cell receptor}}
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Antibody receptor:
Fc receptor |
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| Antigen receptor |
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Antigen receptor
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Accessory molecules
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Antigen receptor
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Accessory molecules
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| Cytokine receptor |
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| Killer-cell IG-like receptors |
KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DL5B, KIR2DS1, KIR2DS2, KIR2DS3, KIR2DS4, KIR2DS5, KIR3DL1, KIR3DL2, KIR3DL3, KIR3DS1
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| Leukocyte IG-like receptors |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Growth factor receptors}}
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| Type I cytokine receptor |
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| Receptor protein serine/threonine kinase |
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| Receptor tyrosine kinase |
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| Tumor necrosis factor receptor |
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| Ig superfamily |
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| Other/ungrouped |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Transmembrane receptors}}
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| G protein-coupled receptor |
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Class A
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Class B
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Class C
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Class D
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Class E
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Class F
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| Ligand-gated ion channel |
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| Enzyme-linked receptor |
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| Other/ungrouped |
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see also cell surface receptor deficiencies
B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Tumor necrosis factor receptor superfamily}}
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Chemokine receptor
(GPCRs) |
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| TNF receptor |
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| JAK-STAT |
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| Ig superfamily |
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| IL-17 family |
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| S/T |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Neuropeptide receptors}}
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| G protein-coupled receptor |
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Other neuropeptide receptors
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| Type I cytokine receptor |
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| Enzyme-linked receptor |
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| Other |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:G protein-coupled receptors}}
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Class A:
Rhodopsin like |
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Metabolites and
signaling molecules
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Peptide
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Miscellaneous
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| Class B: Secretin like |
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Class C: Metabotropic
glutamate / pheromone |
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Class F:
Frizzled / Smoothened |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Immune receptors}}
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Antibody receptor:
Fc receptor |
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| Antigen receptor |
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Antigen receptor
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Accessory molecules
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Antigen receptor
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Accessory molecules
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| Cytokine receptor |
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| Killer-cell IG-like receptors |
KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DL5B, KIR2DS1, KIR2DS2, KIR2DS3, KIR2DS4, KIR2DS5, KIR3DL1, KIR3DL2, KIR3DL3, KIR3DS1
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| Leukocyte IG-like receptors |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Chemokine receptors}}
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Chemokine receptor
(GPCRs) |
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| TNF receptor |
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| JAK-STAT |
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| Ig superfamily |
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| IL-17 family |
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| S/T |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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[edit] Other molecules
{{Template:Adaptor proteins}}
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| JAK-STAT |
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| Growth factor receptor-bound protein |
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| Other |
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B trdu: iter (nrpl/grfl/cytl/horl), csrc (lgic, enzr, gprc, igsr, intg, nrpr/grfr/cytr), itra (adap, gbpr, mapk), calc, lipd; path (hedp, wntp, tgfp+mapp, notp, jakp, fsap, hipp, tlrp)
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{{Template:Neurotrophins}}
[edit] Articles in Categories
[edit] Discussion Archives
[edit] Wikifying Tools
(From Wikipedia:WikiProject_Wikify)
- Can We Link It? - tool for suggesting and adding possible wiki links to articles. Progressively learns what's a good and a bad link. See here for more info. Also checks for unbalanced wiki syntax, which is sometimes a problem when articles are added by new users.
- The Wikipedia Toolbar for the Firefox web-browser can make editing, formatting and linking much more efficient.
- Also useful is the wikification toolbox containing quick links to Wiki guidelines and handy code snippets
[edit] Categorisation tools
(From Wikipedia:WikiProject Categories)
[edit] Sister Project links
[edit] External links