Drosha

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DROSHA
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases DROSHA, ETOHI2, HSA242976, RANSE3L, RN3, RNASE3L, RNASEN, drosha ribonuclease III
External IDs MGI: 1261425 HomoloGene: 8293 GeneCards: DROSHA
RNA expression pattern
PBB GE RNASEN 218269 at tn.png
More reference expression data
Orthologs
Species Human Mouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001100412
NM_013235

NM_001130149
NM_026799

RefSeq (protein)

NP_001093882.1
NP_037367.3

NP_001123621.1
NP_081075.3

Location (UCSC) Chr 5: 31.4 – 31.53 Mb Chr 15: 12.82 – 12.94 Mb
PubMed search [1] [2]
Wikidata
View/Edit Human View/Edit Mouse

Drosha is a Class 2 ribonuclease III enzyme [3] that in humans is encoded by the DROSHA (formerly RNASEN) gene.[4][5][6]

Function[edit]

Members of the ribonuclease III superfamily of double-stranded (ds) RNA-specific endoribonucleases participate in diverse RNA maturation and decay pathways in eukaryotic and prokaryotic cells.[7] The RNase III Drosha is the core nuclease that executes the initiation step of microRNA (miRNA) processing in the nucleus.[6][8]

The microRNAs thus generated are short RNA molecules that regulate a wide variety of other genes by interacting with the RNA-induced silencing complex (RISC) to induce cleavage of complementary messenger RNA (mRNA) as part of the RNA interference pathway. A microRNA molecule is synthesized as a long RNA primary transcript known as a pri-miRNA, which is cleaved by Drosha to produce a characteristic stem-loop structure of about 70 base pairs long, known as a pre-miRNA.[8] Drosha exists as part of a protein complex called the Microprocessor complex, which also contains the double-stranded RNA binding protein Pasha (also called DGCR8).[9] Pasha is essential for Drosha activity and is capable of binding single-stranded fragments of the pri-miRNA that are required for proper processing.[10]

Human Drosha was cloned in 2000, when it was identified as a nuclear dsRNA ribonuclease involved in the processing of ribosomal RNA precursors. The other two human enzymes that participate in the processing and activity of miRNA are the Dicer and Argonaute proteins.

Both Drosha and Pasha are localized to the cell nucleus, where processing of pri-miRNA to pre-miRNA occurs. This latter molecule is then further processed by the RNase Dicer into mature miRNAs in the cell cytoplasm.[8] There also exists an isoform of Drosha that does not contain a nuclear localization signal, which results in the generation of c-Drosha.[11] This variant has been shown to localize to the cell cytoplasm rather than the nucleus, but the effects on pri-miRNA processing are yet unclear.

Both Drosha and Dicer also participate in the DNA damage response.[12]

Clinical significance[edit]

Drosha and other miRNA processing enzymes may be important in cancer prognosis.[13] Both Drosha and Dicer can function as master regulators of miRNA processing and have been observed to be down-regulated in some types of breast cancer.[14] The alternative splicing patterns of Drosha in The Cancer Genome Atlas have also indicated that c-drosha appears to be enriched in various types of breast cancer, colon cancer, and esophagus cancer.[15] However, the exact nature of the association between microRNA processing and tumorigenesis is unclear.[16]

References[edit]

  1. ^ "Human PubMed Reference:". 
  2. ^ "Mouse PubMed Reference:". 
  3. ^ Filippov V, Solovyev V, Filippova M, Gill SS (March 2000). "A novel type of RNase III family proteins in eukaryotes". Gene. 245 (1): 213–21. doi:10.1016/s0378-1119(99)00571-5. PMID 10713462. 
  4. ^ Filippov V, Solovyev V, Filippova M, Gill SS (March 2000). "A novel type of RNase III family proteins in eukaryotes". Gene. 245 (1): 213–21. doi:10.1016/S0378-1119(99)00571-5. PMID 10713462. 
  5. ^ Wu H, Xu H, Miraglia LJ, Crooke ST (November 2000). "Human RNase III is a 160-kDa protein involved in preribosomal RNA processing". The Journal of Biological Chemistry. 275 (47): 36957–65. doi:10.1074/jbc.M005494200. PMID 10948199. 
  6. ^ a b "Entrez Gene: RNASEN ribonuclease III, nuclear". 
  7. ^ Fortin KR, Nicholson RH, Nicholson AW (August 2002). "Mouse ribonuclease III. cDNA structure, expression analysis, and chromosomal location". BMC Genomics. 3 (1): 26. doi:10.1186/1471-2164-3-26. PMC 122089Freely accessible. PMID 12191433. 
  8. ^ a b c Lee Y, Ahn C, Han J, Choi H, Kim J, Yim J, Lee J, Provost P, Rådmark O, Kim S, Kim VN (September 2003). "The nuclear RNase III Drosha initiates microRNA processing". Nature. 425 (6956): 415–9. doi:10.1038/nature01957. PMID 14508493. 
  9. ^ Denli AM, Tops BB, Plasterk RH, Ketting RF, Hannon GJ (November 2004). "Processing of primary microRNAs by the Microprocessor complex". Nature. 432 (7014): 231–5. doi:10.1038/nature03049. PMID 15531879. 
  10. ^ Han J, Lee Y, Yeom KH, Nam JW, Heo I, Rhee JK, Sohn SY, Cho Y, Zhang BT, Kim VN (June 2006). "Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex". Cell. 125 (5): 887–901. doi:10.1016/j.cell.2006.03.043. PMID 16751099. 
  11. ^ Dai L, Chen K, Youngren B, Kulina J, Yang A, Guo Z, Li J, Yu P, Gu S (July 2016). "Cytoplasmic Drosha activity generated by alternative splicing". Nucleic Acids Research. doi:10.1093/nar/gkw668. PMID 27471035. 
  12. ^ Francia S, Michelini F, Saxena A, Tang D, de Hoon M, Anelli V, Mione M, Carninci P, d'Adda di Fagagna F (August 2012). "Site-specific DICER and DROSHA RNA products control the DNA-damage response". Nature. 488 (7410): 231–5. doi:10.1038/nature11179. PMID 22722852. 
  13. ^ Slack FJ, Weidhaas JB (December 2008). "MicroRNA in cancer prognosis". The New England Journal of Medicine. 359 (25): 2720–2. doi:10.1056/NEJMe0808667. PMID 19092157. 
  14. ^ Thomson JM, Newman M, Parker JS, Morin-Kensicki EM, Wright T, Hammond SM (August 2006). "Extensive post-transcriptional regulation of microRNAs and its implications for cancer". Genes & Development. 20 (16): 2202–7. doi:10.1101/gad.1444406. PMC 1553203Freely accessible. PMID 16882971. 
  15. ^ Dai L, Chen K, Youngren B, Kulina J, Yang A, Guo Z, Li J, Yu P, Gu S (July 2016). "Cytoplasmic Drosha activity generated by alternative splicing". Nucleic Acids Research. doi:10.1093/nar/gkw668. PMID 27471035. 
  16. ^ Iorio MV, Croce CM (June 2012). "microRNA involvement in human cancer". Carcinogenesis. 33 (6): 1126–33. doi:10.1093/carcin/bgs140. PMID 22491715. 

Further reading[edit]