Psychrophile

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Psychrophiles or cryophiles (adj. cryophilic) are extremophilic organisms that are capable of growth and reproduction in cold temperatures, ranging from −20 °C[1] to +10 °C.

Many such organisms are bacteria, but psychrophiles also include eukaryotes such as lichens, snow algae, fungi, and wingless midges.

Biology[edit]

The lichen Xanthoria elegans can continue to photosynthesize at −24 °C.[2]

Psychrophiles are protected from freezing and the expansion of ice by ice-induced desiccation and vitrification (glass transition), as long as they cool slowly. Free living cells desiccate and vitrify with a glass transition between −10 °C and −26 °C. Cells of multicellular organisms may vitrify at temperatures below −50 °C. The cells may continue to have some metabolic activity in the extracellular fluid down to these temperatures, and they remain viable once restored to normal temperatures.[1]

Microbial activity has been measured in soils frozen below −39 °C.[3] Among the bacteria that can tolerate extreme cold are Arthrobacter sp., Psychrobacter sp. and members of the genera Halomonas, Pseudomonas, Hyphomonas, and Sphingomonas.[citation needed] Another example is Chryseobacterium greenlandensis, a psychrophile that was found in 120,000-year-old ice.

Some wingless insects (chironomid midges of the genus Diamesa) are still active down to −16 °C.[4] The psychrotrophic pink yeast Rhodotorula glutinis causes food spoilage at temperatures as low as −18 °C.[5] The lichens Umbilicaria antarctica and Xanthoria elegans have been recorded photosynthesizing at temperatures ranging down to −24 °C, and they can grow down to around −10 °C.[6][2] Higher plants and invertebrates can survive down to around −70 °C but need temperatures of around −2 °C or higher to complete their life cycle.[6]

Temperatures as low as −15 °C are found in pockets of very salty water (brine) surrounded by sea ice. Psychrophiles are true extremophiles because they adapt not only to low temperatures but often also to further environmental constraints.[7] They can be contrasted with thermophiles, which thrive at unusually hot temperatures. In addition to that, distinctions between mesophilic and psychrophilic cold-shock response, including lack of repression of house-keeping protein synthesis and the presence of cold-acclimation proteins (Caps) in psychrophiles, does exist.[8] The environments they inhabit are ubiquitous on Earth, as a large fraction of our planetary surface experiences temperatures lower than 15 °C. They are present in alpine and arctic soils, high-latitude and deep ocean waters, polar ice, glaciers, and snowfields. They are of particular interest to astrobiology, the field dedicated to the formulation of theory about the possibility of extraterrestrial life, and to geomicrobiology, the study of microbes active in geochemical processes. In experimental work at University of Alaska Fairbanks, a 1000-litre biogas digester using psychrophiles harvested from "mud from a frozen lake in Alaska" has produced 200–300 litres of methane per day, about 20–30% of the output from digesters in warmer climates.[9]

Psychrophiles use a wide variety of metabolic pathways, including photosynthesis, chemoautotrophy (also sometimes known as lithotrophy), and heterotrophy, and form robust, diverse communities. Most psychrophiles are bacteria or archaea, and psychrophily is present in widely diverse microbial lineages within those broad groups. Some groups of psychrophilic fungi live in oxygen-poor areas under alpine snowfields. A further group of eukaryotic cold-adapted organisms are snow algae, which can cause watermelon snow. Some multicellular eukaryotes can also be metabolically active at negative temperatures, such as some conifers that can still photosynthesize when it is several degrees under 0 °C[10] (conifers are often more cold-resistant than broadleaf trees). Psychrophiles are interesting enzymes that are very useful models in the research of proteins.[7] Psychrophiles are characterized by lipid cell membranes chemically resistant to the stiffening caused by extreme cold, and often create protein 'antifreezes' to keep their internal space liquid and protect their DNA even in temperatures below water's freezing point. A commonly accepted hypothesis for this cold adaptation is the activity-stability-flexibility relationship, suggesting that psychrophilic enzymes increase the flexibility of their structure to compensate for the 'freezing effect' of cold habitats.[8]

Psychrotrophic bacteria[edit]

Psychrotrophic bacteria are bacteria that are capable of surviving or even thriving in extremely cold environment. They provide an estimation of the product's shelf life, also they can be found in soils,[11] in surface and deep sea waters,[12] in Antarctic ecosystems,[13] and in foods.[14] They are responsible for spoiling refrigerated foods.

Psychrotrophic bacteria are of particular concern to the dairy industry.[15] Most are killed by pasteurization; however, they can be present in milk as post-pasteurization contaminants due to less than adequate sanitation practices. According to the Food Science Department at Cornell University, psychrotrophs are bacteria capable of growth at temperatures at or less than 7 °C (44.6 °F). At freezing temperatures, growth of psychrotrophic bacteria becomes negligible or virtually stops.[16]

Comparison of psychrophile with psychrotroph[edit]

In 1940, ZoBell and Conn stated that they have never encountered "true psychrophiles" or organisms that grow best at relatively low temperatures.[17] In 1958, J. L. Ingraham supported this by concluding that there are very few or possibly no bacteria that fit the textbook definitions of psychrophiles. Richard Y. Morita emphasizes this by using the term psychrotrophoc to describe organisms that do not meet the definition of psychrophiles. The confusion between the terms psychrotrophs and psychrophiles was started because investigators were unaware of the thermolability of psychrophilic organisms at the laboratory temperatures. Due to this, early investigators did not determine the cardinal temperatures for their isolates.[18] The similarity between these two is that they are both capable of growing at zero, but optimum and upper temperature limits for the growth are lower for psychrophiles compared to psychrotrophs.[19] Psychrophiles are also more often isolated from permanently cold habitats compared to psychrotrophs. Although psychrophilic enzymes remain under-used because the cost of production and processing at low temperatures is higher than for the commercial enzymes that are presently in use, the attention and resurgence of research interest in psychrophiles and psychrotrophs will be a contributor to the betterment of the environment and the desire to conserve energy.[19]

See also[edit]

References[edit]

  1. ^ a b Neufeld, Josh; Clarke, Andrew; Morris, G. John; Fonseca, Fernanda; Murray, Benjamin J.; Acton, Elizabeth; Price, Hannah C. (2013). "A Low Temperature Limit for Life on Earth". PLoS ONE. 8 (6): e66207. doi:10.1371/journal.pone.0066207. 
  2. ^ a b Barták, Miloš; Váczi, Peter; Hájek, Josef; Smykla, Jerzy (2007). "Low-temperature limitation of primary photosynthetic processes in Antarctic lichens Umbilicaria antarctica and Xanthoria elegans". Polar Biology. 31 (1): 47–51. doi:10.1007/s00300-007-0331-x. 
  3. ^ N.S. Panikov; P.W. Flanagan; W.C. Oechel; M.A. Mastepanov; T.R. Christensen (2006). "Microbial activity in soils frozen to below -39 C". Soil Biology & Biochemistry (38): 785–794. 
  4. ^ Kohshima, Shiro (1984). "A novel cold-tolerant insect found in a Himalayan glacier". Nature. 310 (5974): 225–227. doi:10.1038/310225a0. 
  5. ^ Collins, M.A.; Buick, R.K. (1989). "Effect of temperature on the spoilage of stored peas by Rhodotorula glutinis". Food Microbiology. 6 (3): 135–141. doi:10.1016/S0740-0020(89)80021-8. 
  6. ^ a b "The thermal limits to life on Earth". International Journal of Astrobiology. 13 (2 Special issue: Fifth UK Astrobiology Conference): 141–154. doi:10.1017/S1473550413000438. 
  7. ^ a b Feller, Georges; Charles Gerday (2003). "Psychrophilic Enzymes: Hot Topics in Cold Adaptation". Nat Rev Micro Nature Reviews Microbiology. 1 (3): 200–08. PMID 15035024. doi:10.1038/nrmicro773. 
  8. ^ a b D'Amico, Salvino; Tony Collins; Jean-Claude Marx; Georges Feller; Charles Gerday (2006). "Psychrophilic Microorganisms: Challenges for Life". EMBO Rep EMBO Reports. 7 (4): 385–89. PMC 1456908Freely accessible. PMID 16585939. doi:10.1038/sj.embor.7400662. 
  9. ^ Gupta, Sujata (2010-11-06). "Biogas comes in from the cold". New Scientist. Sunita Harrington. p. 14. Retrieved 2011-02-04. 
  10. ^ Riou-Nivert, Philippe (2001). Les résineux - Tome 1 : connaissance et reconnaissance. Institut pour le développement forestier. p. 79. 
  11. ^ "An Ecological Study of the Psychrotrophic Bacteria of Soil, Water, Grass and Hay - Druce - 2008 - Journal of Applied Microbiology - Wiley Online Library". Journal of Applied Bacteriology. 33: 420–435. doi:10.1111/j.1365-2672.1970.tb02215.x. Retrieved 2010-09-01. 
  12. ^ "Characterization of Psychrotrophic Bacteria in the Surface and Deep-Sea Waters from the Northwestern Pacific Ocean Based on 16S Ribosomal DNA Analysis". Marine Biotechnology. SpringerLink. 3: 454–462. doi:10.1007/s10126-001-0050-1. Retrieved 2010-09-01. 
  13. ^ "Psychrotrophic bacteria isolated from Antarctic ecosystems". . A. Correa-Guimaraes, J. Martín-Gil, M. C. Ramos-Sánchez, L. Vallejo-Pérez. Department of Forestry, Agricultural and Environmental Engineering, ETSIA, Avenida de Madrid, 57, Palencia, Spain
  14. ^ "Psychrotrophic Bacteria in Foods: Disease and Spoilage. - Food Trade Review". Encyclopedia.com. 1993-09-01. Retrieved 2010-09-01. 
  15. ^ "Leon the Milkman's Blog » The case of Psychrotrophic bacteria". Leonthemilkman.com. 2006-03-18. Retrieved 2010-09-01. 
  16. ^ Steven C. Murphy, "Shelf LIfe of Fluid Milk Products -- Microbial Spoilage", Food Science Department, Cornell University.. Retrieved 22 November 2009.
  17. ^ Ingraham, J. L. (1958). "Growth of psychrophilic bacteria". Journal of Bacteriology. 76 (1): 75. PMC 290156Freely accessible. PMID 13563393. 
  18. ^ Morita, Richard Y. (1975). "Psychrophilic bacteria". Bacteriological Reviews. 39 (2): 144. PMC 413900Freely accessible. PMID 1095004. 
  19. ^ a b Russell, N. J.; P. Harrisson; I. A. Johnston; R. Jaenicke; M. Zuber; F. Franks; D. Wynn-Williams (1990). "Cold Adaptation of Microorganisms [and Discussion]". Philosophical Transactions of the Royal Society of London. Series B Biological Sciences. 326 (1237, Life at Low Temperatures): 595–611. JSTOR 2398707. 

Further reading[edit]

  • Asim K. Bej; Jackie Aislabie; Ronald M. Atlas (15 December 2009). Polar Microbiology: The Ecology, Biodiversity and Bioremediation Potential of Microorganisms in Extremely Cold Environments. Crc Pr Inc. ISBN 1420083848. 
  • Yoshinori Murata; et al. (2006). "Genome-wide expression analysis of yeast response during exposure to 4C". Extremophiles. 10 (2): 117–128. doi:10.1007/s00792-005-0480-1. 
  • Mikucki JA; et al. (2009). "A contemporary microbially maintained subglacial ferrous 'ocean'". Science. 324 (5925): 397–400. PMID 19372431. doi:10.1126/science.1167350. 
  • Sandle, T.; Skinner, K. (2013). "Study of psychrophilic and psychrotolerant microorganisms isolated in cold rooms used for pharmaceutical processing". Journal of Applied Microbiology. 114 (4): 1166–1174. doi:10.1111/jam.12101.