Thermus

From Wikipedia, the free encyclopedia
Jump to: navigation, search
For other uses, see Thermus (disambiguation).
Thermus
Thermus aquaticus.JPG
Thermus aquaticus
Scientific classification
Domain: Bacteria[1]
Kingdom: Bacteria
Phylum: Deinococcus–Thermus
Class: Deinococci
Order: Thermales
Genus: Thermus
Brock & Freeze, 1969

Thermus is a genus of thermophilic bacteria. It is one of several bacteria belonging to the Deinococcus–Thermus group. It includes the following species:[2][3][4]

  • Thermus aquaticus Brock & Freeze, 1969[5]
  • Thermus brockianus Williams et al. 1995[6]
  • Thermus chliarophilus Tenreiro et al. 1995[7]
  • Thermus profundus Kobayashi et al. 1995
  • Thermus oshimai Williams et al. 1996
  • Thermus filiformis Hudson et al. 1987
  • Thermus antranikianii Chung, Rainey, Valente, Nobre, & da Costa, 2000[8]
  • Thermus igniterrae Chung, Rainey, Valente, Nobre, & da Costa, 2000[8]
  • Thermus islandicus Bjornsdottir et
  • Thermus arciformis Zhang et al. 2010[9]
  • Thermus composti Vajna et al. 2012[10]
  • Thermus tengchongensis Yu, Yao, Ming, Yin, Zhou, Liu, Tang & Li, 2013[11]
  • Thermus caliditerrae Ming et al. 2014[12]
  • Thermus amyloliquefaciens Yu et al. 2015[13]

Phylogeny[edit]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [14] and National Center for Biotechnology Information (NCBI)[15] and the phylogeny is based on 16S rRNA-based LTP release 115 by 'The All-Species Living Tree' Project [16]



?T. caliditerrae Ming et al. 2014



?T. caldophilusTaguchi et al. 1983



?T. eggertssoniiPeters 2008



?T. kawarayensisKurosawa et al. 2005



?T. murrietaBenner et al. 2006



?T. nonproteolyticus



?T. rehaiLin et al. 2002



?T. tengchongensis Yu et al. 2013



?T. yunnanensisGong et al. 2005



T. oshimai Williams et al. 1996




T. filiformis Hudson et al. 1987




T. thermophilus (ex Oshima and Imahori 1974) Manaia et al. 1995




T. composti Vajna et al. 2012





T. antranikianii Chung et al. 2000



T. scotoductus Kristjansson et al. 1994






T. brockianus Williams et al. 1995



T. igniterrae Chung et al. 2000





T. aquaticus Brock and Freeze 1969 (type sp.)




T. arciformis Zhang et al. 2010



T. islandicus Bjornsdottir et al. 2009










Note:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LSPN)

See also[edit]

References[edit]

  1. ^ "Kingdom Archaea". Plant Physiology Information Website. Ross Koning. 1994. Retrieved 1 September 2009. 
  2. ^ Brock TD & Freeze H (1969). "Thermus aquaticus, a Nonsporulating Extreme Thermophile". J. Bact. 98 (1): 289–97. PMC 249935free to read. PMID 5781580. 
  3. ^ Chung, A. P.; Rainey, F. A.; Valente, M.; Nobre, M. F.; da Costa, M. S. (2000). "Thermus igniterrae sp. nov. and Thermus antranikianii sp. nov., two new species from Iceland". International Journal of Systematic and Evolutionary Microbiology. 50 (1): 209–217. doi:10.1099/00207713-50-1-209. ISSN 1466-5026. PMID 10826806. 
  4. ^ LSPN. "Thermus". www.bacterio.net. Retrieved 2016-03-10. 
  5. ^ Brock, Thomas D.; Freeze, Hudson (1969-04-01). "Thermus aquaticus gen. n. and sp. n., a Nonsporulating Extreme Thermophile". Journal of Bacteriology. 98 (1): 289–297. ISSN 0021-9193. PMC 249935free to read. PMID 5781580. 
  6. ^ WILLIAMS, R. A. D.; SMITH, K. E.; WELCH, S. G.; MICALLEF, J.; SHARP, R. J. (1995-07-01). "DNA Relatedness of Thermus Strains, Description of Thermus brockianus sp. nov., and Proposal To Reestablish Thermus thermophilus (Oshima and Imahori)". International Journal of Systematic Bacteriology. 45 (3): 495–499. doi:10.1099/00207713-45-3-495. 
  7. ^ TENREIRO, S.; NOBRE, M. F.; COSTA, M. S. DA (1995-10-01). "Thermus silvanus sp. nov. and Thermus chliarophilus sp. nov., Two New Species Related to Thermus ruber but with Lower Growth Temperatures". International Journal of Systematic Bacteriology. 45 (4): 633–639. doi:10.1099/00207713-45-4-633. 
  8. ^ a b Chung, A. P.; Rainey, F. A.; Valente, M.; Nobre, M. F.; Costa, M. S. da (2000-01-01). "Thermus igniterrae sp. nov. and Thermus antranikianii sp. nov., two new species from Iceland". INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 50 (1): 209–217. doi:10.1099/00207713-50-1-209. 
  9. ^ Zhang, X. Q.; Ying, Y.; Ye, Y.; Xu, X. W.; Zhu, X. F.; Wu, M. (2010-04-01). "Thermus arciformis sp. nov., a thermophilic species from a geothermal area". INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 60 (4): 834–839. doi:10.1099/ijs.0.007690-0. 
  10. ^ Vajna, B.; Kanizsai, S.; Keki, Z.; Marialigeti, K.; Schumann, P.; Toth, E. M. (2012-07-01). "Thermus composti sp. nov., isolated from oyster mushroom compost". INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 62 (Pt 7): 1486–1490. doi:10.1099/ijs.0.030866-0. 
  11. ^ Yu, Tian-Tian; Yao, Ji-Cheng; Ming, Hong; Yin, Yi-Rui; Zhou, En-Min; Liu, Min-Jiao; Tang, Shu-Kun; Li, Wen-Jun (2013). "Thermus tengchongensis sp. nov., isolated from a geothermally heated soil sample in Tengchong, Yunnan, south-west China". Antonie van Leeuwenhoek. 103 (3): 513–518. doi:10.1007/s10482-012-9833-9. 
  12. ^ Ming, H.; Yin, Y.-R.; Li, S.; Nie, G.-X.; Yu, T.-T.; Zhou, E.-M.; Liu, L.; Dong, L.; Li, W.-J. (2014-02-01). "Thermus caliditerrae sp. nov., a novel thermophilic species isolated from a geothermal area". INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 64 (Pt 2): 650–656. doi:10.1099/ijs.0.056838-0. 
  13. ^ Yu, Tian-Tian; Park, Dong-Jin; Hozzein, Wael N.; Kim, Chang-Jin; Wadaan, Mohammed A. M.; Ming, Hong; Li, Wen-Jun; Yao, Ji-Cheng; Zhou, En-Min (2015-08-01). "Thermus amyloliquefaciens sp. nov., isolated from a hot spring sediment sample". International Journal of Systematic and Evolutionary Microbiology. 65 (8): 2491–2495. doi:10.1099/ijs.0.000289. 
  14. ^ J.P. Euzéby. "Deinococcus–Thermus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2014-03-20. 
  15. ^ Sayers; et al. "Deinococcus–Thermus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2014-03-20. 
  16. ^ 'The All-Species Living Tree' Project."16S rRNA-based LTP release 115 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2014-03-20.