FYB: Difference between revisions
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Importing Wikidata short description: "Protein-coding gene in the species Homo sapiens" |
Immcarle198 (talk | contribs) Expanded "interaction" section into "function" section. Added "structure" section. Changed lead to accommodate changes. |
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{{Short description|Protein-coding gene in the species Homo sapiens}} |
{{Short description|Protein-coding gene in the species Homo sapiens}} |
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{{Infobox_gene}} |
{{Infobox_gene}} |
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'''FYN binding protein (FYB-120/130)''', also known as '''FYB''', '''ADAP''' (Adhesion and degranulation-promoting adapter protein), and '''SLAP-130''' ([[Lymphocyte cytosolic protein 2|SLP-76]]-associated phosphoprotein) is a [[protein]] that is encoded by the ''FYB'' [[gene]] in humans .<ref name="entrez">{{cite web | title = Entrez Gene: FYB FYN binding protein (FYB-120/130)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=2533}}</ref> The protein is expressed in T cells, monocytes, mast cells, macrophages, NK cells, but not B cells.<ref>{{Cite journal |last=Schraven |first=Burkhart |last2=Marie-Cardine |first2=Anne |last3=Koretzky |first3=Gary |date=1997-06 |title=Molecular analysis of the fyn-complex: cloning of SKAP55 and SLAP-130, two novel adaptor proteins which associate with fyn and may participate in the regulation of T cell receptor-mediated signaling |url=http://dx.doi.org/10.1016/s0165-2478(97)00053-9 |journal=Immunology Letters |volume=57 |issue=1-3 |pages=165–169 |doi=10.1016/s0165-2478(97)00053-9 |issn=0165-2478}}</ref><ref name=":0">{{Cite journal |last=Griffiths |first=Emily K |last2=Penninger |first2=Josef M |date=2002-06 |title=Communication between the TCR and integrins: role of the molecular adapter ADAP/Fyb/Slap |url=http://dx.doi.org/10.1016/s0952-7915(02)00334-5 |journal=Current Opinion in Immunology |volume=14 |issue=3 |pages=317–322 |doi=10.1016/s0952-7915(02)00334-5 |issn=0952-7915}}</ref><ref name=":1">{{Cite journal |last=Wang |first=Hongyan |last2=Rudd |first2=Christopher E. |date=2008-10 |title=SKAP-55, SKAP-55-related and ADAP adaptors modulate integrin-mediated immune-cell adhesion |url=http://dx.doi.org/10.1016/j.tcb.2008.07.005 |journal=Trends in Cell Biology |volume=18 |issue=10 |pages=486–493 |doi=10.1016/j.tcb.2008.07.005 |issn=0962-8924}}</ref><ref name=":2">{{Cite journal |last=Gerbec |first=Zachary J. |last2=Thakar |first2=Monica S. |last3=Malarkannan |first3=Subramaniam |date=2015-09-16 |title=The Fyn–ADAP Axis: Cytotoxicity Versus Cytokine Production in Killer Cells |url=http://dx.doi.org/10.3389/fimmu.2015.00472 |journal=Frontiers in Immunology |volume=6 |doi=10.3389/fimmu.2015.00472 |issn=1664-3224}}</ref> FYB is a multifunctional protein involved in post-activation T cell signaling, lymphocyte [[cytokine]] production, [[cell adhesion]], and [[actin remodeling]].<ref name=":0" /><ref name=":1" /><ref name=":2" /><ref name=":3">{{Cite journal |last=Zhang |first=Yanbo |last2=Wang |first2=Hongyan |date=2012-03-02 |title=Integrin signalling and function in immune cells |url=http://dx.doi.org/10.1111/j.1365-2567.2011.03549.x |journal=Immunology |volume=135 |issue=4 |pages=268–275 |doi=10.1111/j.1365-2567.2011.03549.x |issn=0019-2805}}</ref><ref name=":4">{{Cite journal |last=Dadwal |first=Nirdosh |last2=Mix |first2=Charlie |last3=Reinhold |first3=Annegret |last4=Witte |first4=Amelie |last5=Freund |first5=Christian |last6=Schraven |first6=Burkhart |last7=Kliche |first7=Stefanie |date=2021-07-06 |title=The Multiple Roles of the Cytosolic Adapter Proteins ADAP, SKAP1 and SKAP2 for TCR/CD3 -Mediated Signaling Events |url=http://dx.doi.org/10.3389/fimmu.2021.703534 |journal=Frontiers in Immunology |volume=12 |doi=10.3389/fimmu.2021.703534 |issn=1664-3224}}</ref> |
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'''FYN binding protein (FYB-120/130)''', also known as '''FYB''', '''ADAP''' (Adhesion- and Degranulation-promoting Adapter Protein), and '''SLAP-130''' ([[Lymphocyte cytosolic protein 2|SLP-76]]-associated phosphoprotein of 130 kDa) is a [[protein]] that in humans is encoded by the ''FYB'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: FYB FYN binding protein (FYB-120/130)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=2533}}</ref> |
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== Structure == |
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Two [[Protein isoform|isoforms]] of FYB with different lengths of 120 and 130 kDa (FYB-120 and FYB-130) exist.<ref name=":1" /> The 130kDa version has an extra insertion of 46 amino acids and is preferentially expressed in peripheral T cells.<ref name=":1" /> The FYB protein has a variety of binding domains: a non-structured N-terminal region, a proline-rich region, two [[SH3 domain|SH3 domains]], a FPPP-motif which binds the [[Ena/Vasp homology proteins|ENA/VASP protein family]], and other [[Immunoreceptor tyrosine-based activation motif|tyrosine-based signaling motifs]].<ref name=":4" /> |
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FYB has been shown to [[Protein-protein interaction|interact]] with: |
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* [[FYN]],<ref name = pmid7504057>{{cite journal | vauthors = da Silva AJ, Janssen O, Rudd CE | title = T cell receptor zeta/CD3-p59fyn(T)-associated p120/130 binds to the SH2 domain of p59fyn(T) | journal = J. Exp. Med. | volume = 178 | issue = 6 | pages = 2107–13 | date = Dec 1993 | pmid = 7504057 | pmc = 2191307 | doi = 10.1084/jem.178.6.2107 }}</ref><ref name = pmid9748251>{{cite journal | vauthors = Marie-Cardine A, Hendricks-Taylor LR, Boerth NJ, Zhao H, Schraven B, Koretzky GA | title = Molecular interaction between the Fyn-associated protein SKAP55 and the SLP-76-associated phosphoprotein SLAP-130 | journal = J. Biol. Chem. | volume = 273 | issue = 40 | pages = 25789–95 | date = Oct 1998 | pmid = 9748251 | doi = 10.1074/jbc.273.40.25789 | doi-access = free }}</ref> |
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== Function == |
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* SLP-76 ([[Lymphocyte cytosolic protein 2]]),<ref name = pmid9115214>{{cite journal | vauthors = Musci MA, Hendricks-Taylor LR, Motto DG, Paskind M, Kamens J, Turck CW, Koretzky GA | title = Molecular cloning of SLAP-130, an SLP-76-associated substrate of the T cell antigen receptor-stimulated protein tyrosine kinases | journal = J. Biol. Chem. | volume = 272 | issue = 18 | pages = 11674–7 | pmid = 9115214 | doi = 10.1074/jbc.272.18.11674 | year = 1997 | doi-access = free }}</ref> and |
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FYB is critical for activation and proliferation of [[T helper cell|T-helper cells]] (CD4+) and required for [[chemokine]] signal transduction in T-helper cells and [[Cytotoxic T cell|cytotoxic T cells]] (CD8+).<ref name=":4" /> |
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* [[SKAP1]].<ref name = pmid9748251/><ref name = pmid9671755>{{cite journal | vauthors = Liu J, Kang H, Raab M, da Silva AJ, Kraeft SK, Rudd CE | title = FYB (FYN binding protein) serves as a binding partner for lymphoid protein and FYN kinase substrate SKAP55 and a SKAP55-related protein in T cells | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 95 | issue = 15 | pages = 8779–84 | date = Jul 1998 | pmid = 9671755 | pmc = 21153 | doi = 10.1073/pnas.95.15.8779 | bibcode = 1998PNAS...95.8779L | doi-access = free }}</ref> |
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FYB regulates [[cytokine]] production in T cells as well as in activated NK cells through the FYN-ADAP axis.<ref name=":2" /> In T cells, after TCR stimulation, a unique region of FYB, pYDGI, allows phosphorylation of the protein by [[FYN]].<ref name=":2" /> After being phosphorylated, ADAP can bind to [[CARD11|Carma1]], causing [[NF-κB]] translocation into the nucleus and cytokine production.<ref name=":2" /> |
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In mast cells, FYB regulates cell adhesion as well as degranulation.<ref name=":0" /> In T cells, FYB allows for cell adhesion and migration through blood vessels through the [[Lymphocyte cytosolic protein 2|SLP-76]]-FYB-[[SKAP1]] complex.<ref name=":3" /> After being phosphorylated by FYN, FYB can bind to SLP-76.<ref name=":0" /> This binding of FYB and SLP-76 regulates "outside-in signaling" or the transfer of signals from outside the cell to inside the cell by [[integrin]].<ref name=":3" /> FYB can also bind to SKAP1, which allows SKAP1 to upregulate integrin activity through interactions with [[Rap1]].<ref name=":1" /><ref name=":3" /> The bacteria ''[[Yersinia]]'' can interfere with this pathway in macrophages through the secretion of YopH (''Yersinia'' protein tyrosine phosphatase) into the macrophage, which de-phosphorylates FYB and SKAP1, leading to a decrease in integrin activity that results in an inhibition of adhesion, phagocytosis, and cytotoxicity.<ref name=":1" /> |
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FYB is also an important protein for [[actin remodeling]] of immune cells.<ref name=":4" /> This is thought to occur through the binding of proteins of the [[Ena/Vasp homology proteins|ENA/VASP protein family]] to the FPPPP-motif of the FYB protein.<ref name=":4" /> |
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== References == |
== References == |
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Revision as of 23:19, 9 March 2023
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| Identifiers | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Aliases | FYB1, ADAP, PRO0823, SLAP-130, SLAP130, FYB, FYN binding protein, THC3, FYN binding protein 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| External IDs | OMIM: 602731; MGI: 1346327; HomoloGene: 22664; GeneCards: FYB1; OMA:FYB1 - orthologs | ||||||||||||||||||||||||||||||||||||||||||||||||||
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FYN binding protein (FYB-120/130), also known as FYB, ADAP (Adhesion and degranulation-promoting adapter protein), and SLAP-130 (SLP-76-associated phosphoprotein) is a protein that is encoded by the FYB gene in humans .[5] The protein is expressed in T cells, monocytes, mast cells, macrophages, NK cells, but not B cells.[6][7][8][9] FYB is a multifunctional protein involved in post-activation T cell signaling, lymphocyte cytokine production, cell adhesion, and actin remodeling.[7][8][9][10][11]
Structure
Two isoforms of FYB with different lengths of 120 and 130 kDa (FYB-120 and FYB-130) exist.[8] The 130kDa version has an extra insertion of 46 amino acids and is preferentially expressed in peripheral T cells.[8] The FYB protein has a variety of binding domains: a non-structured N-terminal region, a proline-rich region, two SH3 domains, a FPPP-motif which binds the ENA/VASP protein family, and other tyrosine-based signaling motifs.[11]
Function
FYB is critical for activation and proliferation of T-helper cells (CD4+) and required for chemokine signal transduction in T-helper cells and cytotoxic T cells (CD8+).[11]
FYB regulates cytokine production in T cells as well as in activated NK cells through the FYN-ADAP axis.[9] In T cells, after TCR stimulation, a unique region of FYB, pYDGI, allows phosphorylation of the protein by FYN.[9] After being phosphorylated, ADAP can bind to Carma1, causing NF-κB translocation into the nucleus and cytokine production.[9]
In mast cells, FYB regulates cell adhesion as well as degranulation.[7] In T cells, FYB allows for cell adhesion and migration through blood vessels through the SLP-76-FYB-SKAP1 complex.[10] After being phosphorylated by FYN, FYB can bind to SLP-76.[7] This binding of FYB and SLP-76 regulates "outside-in signaling" or the transfer of signals from outside the cell to inside the cell by integrin.[10] FYB can also bind to SKAP1, which allows SKAP1 to upregulate integrin activity through interactions with Rap1.[8][10] The bacteria Yersinia can interfere with this pathway in macrophages through the secretion of YopH (Yersinia protein tyrosine phosphatase) into the macrophage, which de-phosphorylates FYB and SKAP1, leading to a decrease in integrin activity that results in an inhibition of adhesion, phagocytosis, and cytotoxicity.[8]
FYB is also an important protein for actin remodeling of immune cells.[11] This is thought to occur through the binding of proteins of the ENA/VASP protein family to the FPPPP-motif of the FYB protein.[11]
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000082074 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000022148 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Entrez Gene: FYB FYN binding protein (FYB-120/130)".
- ^ Schraven, Burkhart; Marie-Cardine, Anne; Koretzky, Gary (1997-06). "Molecular analysis of the fyn-complex: cloning of SKAP55 and SLAP-130, two novel adaptor proteins which associate with fyn and may participate in the regulation of T cell receptor-mediated signaling". Immunology Letters. 57 (1–3): 165–169. doi:10.1016/s0165-2478(97)00053-9. ISSN 0165-2478.
{{cite journal}}: Check date values in:|date=(help) - ^ a b c d Griffiths, Emily K; Penninger, Josef M (2002-06). "Communication between the TCR and integrins: role of the molecular adapter ADAP/Fyb/Slap". Current Opinion in Immunology. 14 (3): 317–322. doi:10.1016/s0952-7915(02)00334-5. ISSN 0952-7915.
{{cite journal}}: Check date values in:|date=(help) - ^ a b c d e f Wang, Hongyan; Rudd, Christopher E. (2008-10). "SKAP-55, SKAP-55-related and ADAP adaptors modulate integrin-mediated immune-cell adhesion". Trends in Cell Biology. 18 (10): 486–493. doi:10.1016/j.tcb.2008.07.005. ISSN 0962-8924.
{{cite journal}}: Check date values in:|date=(help) - ^ a b c d e Gerbec, Zachary J.; Thakar, Monica S.; Malarkannan, Subramaniam (2015-09-16). "The Fyn–ADAP Axis: Cytotoxicity Versus Cytokine Production in Killer Cells". Frontiers in Immunology. 6. doi:10.3389/fimmu.2015.00472. ISSN 1664-3224.
{{cite journal}}: CS1 maint: unflagged free DOI (link) - ^ a b c d Zhang, Yanbo; Wang, Hongyan (2012-03-02). "Integrin signalling and function in immune cells". Immunology. 135 (4): 268–275. doi:10.1111/j.1365-2567.2011.03549.x. ISSN 0019-2805.
- ^ a b c d e Dadwal, Nirdosh; Mix, Charlie; Reinhold, Annegret; Witte, Amelie; Freund, Christian; Schraven, Burkhart; Kliche, Stefanie (2021-07-06). "The Multiple Roles of the Cytosolic Adapter Proteins ADAP, SKAP1 and SKAP2 for TCR/CD3 -Mediated Signaling Events". Frontiers in Immunology. 12. doi:10.3389/fimmu.2021.703534. ISSN 1664-3224.
{{cite journal}}: CS1 maint: unflagged free DOI (link)
Further reading
- da Silva AJ, Janssen O, Rudd CE (1993). "T cell receptor zeta/CD3-p59fyn(T)-associated p120/130 binds to the SH2 domain of p59fyn(T)". J. Exp. Med. 178 (6): 2107–13. doi:10.1084/jem.178.6.2107. PMC 2191307. PMID 7504057.
- Musci MA, Hendricks-Taylor LR, Motto DG, Paskind M, Kamens J, Turck CW, Koretzky GA (1997). "Molecular cloning of SLAP-130, an SLP-76-associated substrate of the T cell antigen receptor-stimulated protein tyrosine kinases". J. Biol. Chem. 272 (18): 11674–7. doi:10.1074/jbc.272.18.11674. PMID 9115214.
- da Silva AJ, Li Z, de Vera C, Canto E, Findell P, Rudd CE (1997). "Cloning of a novel T-cell protein FYB that binds FYN and SH2-domain-containing leukocyte protein 76 and modulates interleukin 2 production". Proc. Natl. Acad. Sci. U.S.A. 94 (14): 7493–8. Bibcode:1997PNAS...94.7493D. doi:10.1073/pnas.94.14.7493. PMC 23849. PMID 9207119.
- Liu J, Kang H, Raab M, da Silva AJ, Kraeft SK, Rudd CE (1998). "FYB (FYN binding protein) serves as a binding partner for lymphoid protein and FYN kinase substrate SKAP55 and a SKAP55-related protein in T cells". Proc. Natl. Acad. Sci. U.S.A. 95 (15): 8779–84. Bibcode:1998PNAS...95.8779L. doi:10.1073/pnas.95.15.8779. PMC 21153. PMID 9671755.
- Marie-Cardine A, Hendricks-Taylor LR, Boerth NJ, Zhao H, Schraven B, Koretzky GA (1998). "Molecular interaction between the Fyn-associated protein SKAP55 and the SLP-76-associated phosphoprotein SLAP-130". J. Biol. Chem. 273 (40): 25789–95. doi:10.1074/jbc.273.40.25789. PMID 9748251.
- Marie-Cardine A, Verhagen AM, Eckerskorn C, Schraven B (1998). "SKAP-HOM, a novel adaptor protein homologous to the FYN-associated protein SKAP55". FEBS Lett. 435 (1): 55–60. doi:10.1016/S0014-5793(98)01040-0. PMID 9755858. S2CID 37288744.
- Veale M, Raab M, Li Z, da Silva AJ, Kraeft SK, Weremowicz S, Morton CC, Rudd CE (1999). "Novel isoform of lymphoid adaptor FYN-T-binding protein (FYB-130) interacts with SLP-76 and up-regulates interleukin 2 production". J. Biol. Chem. 274 (40): 28427–35. doi:10.1074/jbc.274.40.28427. PMID 10497204.
- Hamid N, Gustavsson A, Andersson K, McGee K, Persson C, Rudd CE, Fällman M (1999). "YopH dephosphorylates Cas and Fyn-binding protein in macrophages". Microbial Pathogenesis. 27 (4): 231–42. doi:10.1006/mpat.1999.0301. PMID 10502464.
- Geng L, Raab M, Rudd CE (1999). "Cutting edge: SLP-76 cooperativity with FYB/FYN-T in the Up-regulation of TCR-driven IL-2 transcription requires SLP-76 binding to FYB at Tyr595 and Tyr651". J. Immunol. 163 (11): 5753–7. PMID 10570256.
- Krause M, Sechi AS, Konradt M, Monner D, Gertler FB, Wehland J (2000). "Fyn-binding protein (Fyb)/SLP-76-associated protein (SLAP), Ena/vasodilator-stimulated phosphoprotein (VASP) proteins and the Arp2/3 complex link T cell receptor (TCR) signaling to the actin cytoskeleton". J. Cell Biol. 149 (1): 181–94. doi:10.1083/jcb.149.1.181. PMC 2175102. PMID 10747096.
- Kang H, Freund C, Duke-Cohan JS, Musacchio A, Wagner G, Rudd CE (2000). "SH3 domain recognition of a proline-independent tyrosine-based RKxxYxxY motif in immune cell adaptor SKAP55". EMBO J. 19 (12): 2889–99. doi:10.1093/emboj/19.12.2889. PMC 203341. PMID 10856234.
- Asazuma N, Wilde JI, Berlanga O, Leduc M, Leo A, Schweighoffer E, Tybulewicz V, Bon C, Liu SK, McGlade CJ, Schraven B, Watson SP (2000). "Interaction of linker for activation of T cells with multiple adapter proteins in platelets activated by the glycoprotein VI-selective ligand, convulxin". J. Biol. Chem. 275 (43): 33427–34. doi:10.1074/jbc.M001439200. PMID 10942756.
- Li C, Iosef C, Jia CY, Han VK, Li SS (2003). "Dual functional roles for the X-linked lymphoproliferative syndrome gene product SAP/SH2D1A in signaling through the signaling lymphocyte activation molecule (SLAM) family of immune receptors". J. Biol. Chem. 278 (6): 3852–9. doi:10.1074/jbc.M206649200. PMID 12458214.
- Brill LM, Salomon AR, Ficarro SB, Mukherji M, Stettler-Gill M, Peters EC (2004). "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry". Anal. Chem. 76 (10): 2763–72. doi:10.1021/ac035352d. PMID 15144186.
- Heuer K, Arbuzova A, Strauss H, Kofler M, Freund C (2005). "The helically extended SH3 domain of the T cell adaptor protein ADAP is a novel lipid interaction domain". J. Mol. Biol. 348 (4): 1025–35. doi:10.1016/j.jmb.2005.02.069. PMID 15843031.
- Huang Y, Norton DD, Precht P, Martindale JL, Burkhardt JK, Wange RL (2005). "Deficiency of ADAP/Fyb/SLAP-130 destabilizes SKAP55 in Jurkat T cells". J. Biol. Chem. 280 (25): 23576–83. doi:10.1074/jbc.M413201200. PMID 15849195.
- Koga S, Yogo K, Yoshikawa K, Samori H, Goto M, Uchida T, Ishida N, Takeya T (2005). "Physical and functional association of c-Src and adhesion and degranulation promoting adaptor protein (ADAP) in osteoclastogenesis in vitro". J. Biol. Chem. 280 (36): 31564–71. doi:10.1074/jbc.M502703200. PMID 16020549.
- Duke-Cohan JS, Kang H, Liu H, Rudd CE (2006). "Regulation and function of SKAP-55 non-canonical motif binding to the SH3c domain of adhesion and degranulation-promoting adaptor protein". J. Biol. Chem. 281 (19): 13743–50. doi:10.1074/jbc.M508774200. PMID 16461356.
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