Drosophila immigrans species group: Difference between revisions
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The Drosophila Immigrans species group is a [[polyphyletic]] and speciose lineage of ''[[Drosophila]]'' flies, including over 100 species.<ref name=OGrady>https:// |
The Drosophila Immigrans species group is a [[polyphyletic]] and speciose lineage of ''[[Drosophila]]'' flies, including over 100 species.<ref name=OGrady>{{Cite journal|url=https://www.genetics.org/content/209/1/1|title=Phylogeny of the Genus Drosophila|first1=Rob|last1=DeSalle|first2=Patrick M.|last2=O’Grady|date=May 1, 2018|journal=Genetics|volume=209|issue=1|pages=1–25|via=www.genetics.org|doi=10.1534/genetics.117.300583|pmid=29716983|pmc=5937177}}</ref><ref name=Katoh>{{Cite journal|title=Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences|first1=Tadashi|last1=Aotsuka|first2=Koichiro|last2=Tamura|first3=Daisuke|last3=Nakaya|first4=Toru|last4=Katoh|date=September 25, 2007|journal=Zoological Science|volume=24|issue=9|pages=913–921|doi=10.2108/zsj.24.913|pmid = 17960997|hdl = 2115/43826}}</ref> Immigrans species belong to the [[Immigrans-tripunctata radiation]] of the subgenus [[Drosophila (subgenus)|Drosophila]]. Well-described species include ''[[Drosophila immigrans]]'', and the sister species ''[[Drosophila albomicans]]'' and ''[[Drosophila nasuta]]''. The genome of ''D. albomicans'' was sequenced in 2012 in an effort to characterize novel sex chromosome development in ''D. albomicans''.<ref>{{Cite journal|title=Deciphering neo-sex and B chromosome evolution by the draft genome of Drosophila albomicans|first1=Qi|last1=Zhou|first2=Hong-mei|last2=Zhu|first3=Quan-fei|last3=Huang|first4=Li|last4=Zhao|first5=Guo-jie|last5=Zhang|first6=Scott W.|last6=Roy|first7=Beatriz|last7=Vicoso|first8=Zhao-lin|last8=Xuan|first9=Jue|last9=Ruan|first10=Yue|last10=Zhang|first11=Ruo-ping|last11=Zhao|first12=Chen|last12=Ye|first13=Xiu-qing|last13=Zhang|first14=Jun|last14=Wang|first15=Wen|last15=Wang|first16=Doris|last16=Bachtrog|date=March 22, 2012|journal=BMC Genomics|volume=13|issue=1|pages=109|doi=10.1186/1471-2164-13-109|pmid=22439699|pmc=3353239}}</ref> Immigrans group species are related to [[mushroom-breeding Drosophila]] of the [[Drosophila quinaria species group|Quinaria]] and [[Drosophila testacea species group|Testacea species group]]s.<ref name=Katoh/><ref name=Hanson>{{cite journal | vauthors = Hanson MA, Hamilton PT, Perlman SJ | title = Immune genes and divergent antimicrobial peptides in flies of the subgenus Drosophila | journal = BMC Evolutionary Biology | volume = 16 | issue = 1 | pages = 228 | date = October 2016 | pmid = 27776480 | pmc = 5078906 | doi = 10.1186/s12862-016-0805-y }}</ref> |
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==Subgroups== |
==Subgroups== |
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==Notes== |
==Notes== |
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* Bachtrog and Vicoso. 2015. [https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002078 "Numerous Transitions of Sex Chromosomes in Diptera."] PLoS Biology, 13(4), e1002078<ref name=Vicoso>{{cite journal |
* Bachtrog and Vicoso. 2015. [https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002078 "Numerous Transitions of Sex Chromosomes in Diptera."] PLoS Biology, 13(4), e1002078<ref name=Vicoso>{{cite journal|title=Numerous Transitions of Sex Chromosomes in Diptera|last1=Vicoso|first1=B|last2=Bachtrog|first2=D|date=2015|journal=PLoS Biology|volume=13|issue=4|pages=e1002078|doi = 10.1371/journal.pbio.1002078|pmid = 25879221|pmc = 4400102}}</ref> |
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* Katoh et al. 2007. [https://www.researchgate.net/publication/5884860_Phylogeny_of_the_Drosophila_immigrans_Species_Group_Diptera_Drosophilidae_Based_on_Adh_and_Gpdh_Sequences "Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences."] Zoolog Sci. 24(9):913-21.<ref name=Katoh/> |
* Katoh et al. 2007. [https://www.researchgate.net/publication/5884860_Phylogeny_of_the_Drosophila_immigrans_Species_Group_Diptera_Drosophilidae_Based_on_Adh_and_Gpdh_Sequences "Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences."] Zoolog Sci. 24(9):913-21.<ref name=Katoh/> |
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Revision as of 14:13, 25 August 2019
Drosophila immigrans species group | |
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Drosophila immigrans | |
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The Drosophila Immigrans species group is a polyphyletic and speciose lineage of Drosophila flies, including over 100 species.[1][2] Immigrans species belong to the Immigrans-tripunctata radiation of the subgenus Drosophila. Well-described species include Drosophila immigrans, and the sister species Drosophila albomicans and Drosophila nasuta. The genome of D. albomicans was sequenced in 2012 in an effort to characterize novel sex chromosome development in D. albomicans.[3] Immigrans group species are related to mushroom-breeding Drosophila of the Quinaria and Testacea species groups.[2][4]
Subgroups
The Immigrans species group can be further divided into four subgroups[2]:
- Immigrans subgroup: includes D. immigrans
- Nasuta subgroup: includes D. albomicans and D. nasuta
- Hypocausta subgroup
- Quadrilineata subgroup
Notes
- Bachtrog and Vicoso. 2015. "Numerous Transitions of Sex Chromosomes in Diptera." PLoS Biology, 13(4), e1002078[5]
- Katoh et al. 2007. "Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences." Zoolog Sci. 24(9):913-21.[2]
References
- ^ DeSalle, Rob; O’Grady, Patrick M. (May 1, 2018). "Phylogeny of the Genus Drosophila". Genetics. 209 (1): 1–25. doi:10.1534/genetics.117.300583. PMC 5937177. PMID 29716983 – via www.genetics.org.
- ^ a b c d Aotsuka, Tadashi; Tamura, Koichiro; Nakaya, Daisuke; Katoh, Toru (September 25, 2007). "Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences". Zoological Science. 24 (9): 913–921. doi:10.2108/zsj.24.913. hdl:2115/43826. PMID 17960997.
- ^ Zhou, Qi; Zhu, Hong-mei; Huang, Quan-fei; Zhao, Li; Zhang, Guo-jie; Roy, Scott W.; Vicoso, Beatriz; Xuan, Zhao-lin; Ruan, Jue; Zhang, Yue; Zhao, Ruo-ping; Ye, Chen; Zhang, Xiu-qing; Wang, Jun; Wang, Wen; Bachtrog, Doris (March 22, 2012). "Deciphering neo-sex and B chromosome evolution by the draft genome of Drosophila albomicans". BMC Genomics. 13 (1): 109. doi:10.1186/1471-2164-13-109. PMC 3353239. PMID 22439699.
{{cite journal}}
: CS1 maint: unflagged free DOI (link) - ^ Hanson MA, Hamilton PT, Perlman SJ (October 2016). "Immune genes and divergent antimicrobial peptides in flies of the subgenus Drosophila". BMC Evolutionary Biology. 16 (1): 228. doi:10.1186/s12862-016-0805-y. PMC 5078906. PMID 27776480.
{{cite journal}}
: CS1 maint: unflagged free DOI (link) - ^ Vicoso, B; Bachtrog, D (2015). "Numerous Transitions of Sex Chromosomes in Diptera". PLoS Biology. 13 (4): e1002078. doi:10.1371/journal.pbio.1002078. PMC 4400102. PMID 25879221.
{{cite journal}}
: CS1 maint: unflagged free DOI (link)