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==Research==
==Research==
His research area is [[computational biology]] and [[bioinformatics]], in particular GO analysis,<ref>{{Cite journal|last=Khatri|first=Purvesh|last2=Draghici|first2=Sorin|last3=Ostermeier|first3=G.Charles|last4=Krawetz|first4=Stephen A.|date=February 2002|title=Profiling Gene Expression Using Onto-Express|url=https://linkinghub.elsevier.com/retrieve/pii/S088875430296698X|journal=Genomics|language=en|volume=79|issue=2|pages=266–270|doi=10.1006/geno.2002.6698}}</ref><ref>{{Cite journal|last=Drǎghici|first=Sorin|last2=Khatri|first2=Purvesh|last3=Martins|first3=Rui P.|last4=Ostermeier|first4=G.Charles|last5=Krawetz|first5=Stephen A.|date=February 2003|title=Global functional profiling of gene expression☆☆This work was funded in part by a Sun Microsystems grant awarded to S.D., NIH Grant HD36512 to S.A.K., a Wayne State University SOM Dean’s Post-Doctoral Fellowship, and an NICHD Contraception and Infertility Loan to G.C.O. Support from the WSU MCBI mode is gratefully appreciated.|url=https://linkinghub.elsevier.com/retrieve/pii/S0888754302000216|journal=Genomics|language=en|volume=81|issue=2|pages=98–104|doi=10.1016/S0888-7543(02)00021-6}}</ref> pathway analysis,<ref>{{Cite journal|last=Draghici|first=S.|last2=Khatri|first2=P.|last3=Tarca|first3=A. L.|last4=Amin|first4=K.|last5=Done|first5=A.|last6=Voichita|first6=C.|last7=Georgescu|first7=C.|last8=Romero|first8=R.|date=2007-09-04|title=A systems biology approach for pathway level analysis|url=http://www.genome.org/cgi/doi/10.1101/gr.6202607|journal=Genome Research|language=en|volume=17|issue=10|pages=1537–1545|doi=10.1101/gr.6202607|issn=1088-9051|pmc=1987343|pmid=17785539}}</ref> meta-analysis, and drug repurposing. His research has been supported by the [[National Science Foundation]],<ref>{{Cite web | url=https://www.nsf.gov/awardsearch/simpleSearchResult?queryText=draghici | title=NSF Award Search: Simple Search Results}}</ref> [[National Health Institutes]] <ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=8479371&icde=32073923&ddparam=&ddvalue=&ddsub=&cr=10&csb=default&cs=ASC | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=8515396&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=6&csb=default&cs=ASC | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7949001&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=9&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7612527&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=13&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7285278&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=14&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=6581610&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=17&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref> and others. He has published over 190 scholarly papers <ref>{{cite web|title=Google Scholar|url=https://scholar.google.com/citations?user=fbkIhRYAAAAJ&hl=en&oi=ao|website=Google Scholar|accessdate=29 November 2016}}</ref><ref>http://orcid.org/0000-0002-0786-8377</ref> and two technical books: ''Statistics and Data Analysis for Microarrays Using R and Bioconductor'' and ''Data Analysis Tools for DNA Microarrays''.
His research area is [[computational biology]] and [[bioinformatics]], in particular GO analysis,<ref>{{Cite journal|last=Khatri|first=Purvesh|last2=Draghici|first2=Sorin|last3=Ostermeier|first3=G.Charles|last4=Krawetz|first4=Stephen A.|date=February 2002|title=Profiling Gene Expression Using Onto-Express|url=https://linkinghub.elsevier.com/retrieve/pii/S088875430296698X|journal=Genomics|language=en|volume=79|issue=2|pages=266–270|doi=10.1006/geno.2002.6698}}</ref><ref>{{Cite journal|last=Drǎghici|first=Sorin|last2=Khatri|first2=Purvesh|last3=Martins|first3=Rui P.|last4=Ostermeier|first4=G.Charles|last5=Krawetz|first5=Stephen A.|date=February 2003|title=Global functional profiling of gene expression☆☆This work was funded in part by a Sun Microsystems grant awarded to S.D., NIH Grant HD36512 to S.A.K., a Wayne State University SOM Dean’s Post-Doctoral Fellowship, and an NICHD Contraception and Infertility Loan to G.C.O. Support from the WSU MCBI mode is gratefully appreciated.|url=https://linkinghub.elsevier.com/retrieve/pii/S0888754302000216|journal=Genomics|language=en|volume=81|issue=2|pages=98–104|doi=10.1016/S0888-7543(02)00021-6}}</ref> pathway analysis,<ref>{{Cite journal|last=Draghici|first=S.|last2=Khatri|first2=P.|last3=Tarca|first3=A. L.|last4=Amin|first4=K.|last5=Done|first5=A.|last6=Voichita|first6=C.|last7=Georgescu|first7=C.|last8=Romero|first8=R.|date=2007-09-04|title=A systems biology approach for pathway level analysis|url=http://www.genome.org/cgi/doi/10.1101/gr.6202607|journal=Genome Research|language=en|volume=17|issue=10|pages=1537–1545|doi=10.1101/gr.6202607|issn=1088-9051|pmc=1987343|pmid=17785539}}</ref><ref>{{Cite journal|last=Donato|first=Michele|last2=Xu|first2=Zhonghui|last3=Tomoiaga|first3=Alin|last4=Granneman|first4=James G.|last5=MacKenzie|first5=Robert G.|last6=Bao|first6=Riyue|last7=Than|first7=Nandor Gabor|last8=Westfall|first8=Peter H.|last9=Romero|first9=Roberto|last10=Draghici|first10=Sorin|date=2013-11|title=Analysis and correction of crosstalk effects in pathway analysis|url=http://genome.cshlp.org/lookup/doi/10.1101/gr.153551.112|journal=Genome Research|language=en|volume=23|issue=11|pages=1885–1893|doi=10.1101/gr.153551.112|issn=1088-9051|pmc=PMC3814888|pmid=23934932}}</ref><ref>{{Cite journal|last=Tarca|first=Adi Laurentiu|last2=Draghici|first2=Sorin|last3=Bhatti|first3=Gaurav|last4=Romero|first4=Roberto|date=2012-12|title=Down-weighting overlapping genes improves gene set analysis|url=https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-13-136|journal=BMC Bioinformatics|language=en|volume=13|issue=1|pages=136|doi=10.1186/1471-2105-13-136|issn=1471-2105|pmc=PMC3443069|pmid=22713124}}</ref><ref>{{Cite journal|last=Hanoudi|first=Samer|last2=Donato|first2=Michele|last3=Draghici|first3=Sorin|date=2017-05-09|editor-last=Escriva|editor-first=Hector|title=Identifying biologically relevant putative mechanisms in a given phenotype comparison|url=https://dx.plos.org/10.1371/journal.pone.0176950|journal=PLOS ONE|language=en|volume=12|issue=5|pages=e0176950|doi=10.1371/journal.pone.0176950|issn=1932-6203|pmc=PMC5423614|pmid=28486531}}</ref><ref>{{Cite journal|last=Hanoudi|first=Samer|last2=Donato|first2=Michele|last3=Draghici|first3=Sorin|date=2017-05-09|editor-last=Escriva|editor-first=Hector|title=Identifying biologically relevant putative mechanisms in a given phenotype comparison|url=https://dx.plos.org/10.1371/journal.pone.0176950|journal=PLOS ONE|language=en|volume=12|issue=5|pages=e0176950|doi=10.1371/journal.pone.0176950|issn=1932-6203|pmc=PMC5423614|pmid=28486531}}</ref><ref>{{Cite journal|last=Nguyen|first=Tuan-Minh|last2=Shafi|first2=Adib|last3=Nguyen|first3=Tin|last4=Draghici|first4=Sorin|date=2019-12|title=Identifying significantly impacted pathways: a comprehensive review and assessment|url=https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1790-4|journal=Genome Biology|language=en|volume=20|issue=1|pages=203|doi=10.1186/s13059-019-1790-4|issn=1474-760X|pmc=PMC6784345|pmid=31597578}}</ref> meta-analysis<ref>{{Cite journal|last=Nguyen|first=Tin|last2=Tagett|first2=Rebecca|last3=Donato|first3=Michele|last4=Mitrea|first4=Cristina|last5=Draghici|first5=Sorin|date=2016-02-01|title=A novel bi-level meta-analysis approach: applied to biological pathway analysis|url=https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btv588|journal=Bioinformatics|language=en|volume=32|issue=3|pages=409–416|doi=10.1093/bioinformatics/btv588|issn=1367-4803|pmc=PMC5006307|pmid=26471455}}</ref><ref>{{Cite journal|last=Nguyen|first=Tin|last2=Diaz|first2=Diana|last3=Draghici|first3=Sorin|date=2016-10-02|title=TOMAS: A novel TOpology-aware Meta-Analysis approach applied to System biology|url=https://dl.acm.org/doi/10.1145/2975167.2975168|journal=Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics|language=en|location=Seattle WA USA|publisher=ACM|pages=13–22|doi=10.1145/2975167.2975168|isbn=978-1-4503-4225-4}}</ref><ref>{{Cite journal|last=Nguyen|first=Tin|last2=Mitrea|first2=Cristina|last3=Tagett|first3=Rebecca|last4=Draghici|first4=Sorin|date=2017-03|title=DANUBE: Data-Driven Meta-ANalysis Using UnBiased Empirical Distributions—Applied to Biological Pathway Analysis|url=http://ieeexplore.ieee.org/document/7445135/|journal=Proceedings of the IEEE|volume=105|issue=3|pages=496–515|doi=10.1109/JPROC.2015.2507119|issn=0018-9219}}</ref><ref>{{Cite journal|last=Shafi|first=Adib|last2=Nguyen|first2=Tin|last3=Peyvandipour|first3=Azam|last4=Draghici|first4=Sorin|date=2019-07-22|editor-last=Kelso|editor-first=Janet|title=GSMA: an approach to identify robust global and test Gene Signatures using Meta-Analysis|url=https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btz561/5536878|journal=Bioinformatics|language=en|pages=btz561|doi=10.1093/bioinformatics/btz561|issn=1367-4803}}</ref><ref>{{Cite journal|last=Shafi|first=Adib|last2=Nguyen|first2=Tin|last3=Peyvandipour|first3=Azam|last4=Nguyen|first4=Hung|last5=Draghici|first5=Sorin|date=2019-03-19|title=A Multi-Cohort and Multi-Omics Meta-Analysis Framework to Identify Network-Based Gene Signatures|url=https://www.frontiersin.org/article/10.3389/fgene.2019.00159/full|journal=Frontiers in Genetics|volume=10|pages=159|doi=10.3389/fgene.2019.00159|issn=1664-8021|pmc=PMC6434849|pmid=30941158}}</ref><ref>{{Cite journal|last=Nguyen|first=Tin|last2=Shafi|first2=Adib|last3=Nguyen|first3=Tuan-Minh|last4=Schissler|first4=A. Grant|last5=Draghici|first5=Sorin|date=2020-12|title=NBIA: a network-based integrative analysis framework – applied to pathway analysis|url=http://www.nature.com/articles/s41598-020-60981-9|journal=Scientific Reports|language=en|volume=10|issue=1|pages=4188|doi=10.1038/s41598-020-60981-9|issn=2045-2322|pmc=PMC7060280|pmid=32144346}}</ref>, and drug repurposing<ref>{{Cite journal|last=Saberian|first=Nafiseh|last2=Peyvandipour|first2=Azam|last3=Donato|first3=Michele|last4=Ansari|first4=Sahar|last5=Draghici|first5=Sorin|date=2019-10-01|editor-last=Kelso|editor-first=Janet|title=A new computational drug repurposing method using established disease–drug pair knowledge|url=https://academic.oup.com/bioinformatics/article/35/19/3672/5370176|journal=Bioinformatics|language=en|volume=35|issue=19|pages=3672–3678|doi=10.1093/bioinformatics/btz156|issn=1367-4803|pmc=PMC6761937|pmid=30840053}}</ref><ref>{{Cite journal|last=Peyvandipour|first=Azam|last2=Saberian|first2=Nafiseh|last3=Shafi|first3=Adib|last4=Donato|first4=Michele|last5=Draghici|first5=Sorin|date=2018-08-15|editor-last=Valencia|editor-first=Alfonso|title=A novel computational approach for drug repurposing using systems biology|url=https://academic.oup.com/bioinformatics/article/34/16/2817/4925258|journal=Bioinformatics|language=en|volume=34|issue=16|pages=2817–2825|doi=10.1093/bioinformatics/bty133|issn=1367-4803|pmc=PMC6084573|pmid=29534151}}</ref>. His research has been supported by the [[National Science Foundation]],<ref>{{Cite web | url=https://www.nsf.gov/awardsearch/simpleSearchResult?queryText=draghici | title=NSF Award Search: Simple Search Results}}</ref> [[National Health Institutes]] <ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=8479371&icde=32073923&ddparam=&ddvalue=&ddsub=&cr=10&csb=default&cs=ASC | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=8515396&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=6&csb=default&cs=ASC | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7949001&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=9&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7612527&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=13&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=7285278&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=14&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref><ref>{{Cite web | url=https://projectreporter.nih.gov/project_info_details.cfm?aid=6581610&icde=32073941&ddparam=&ddvalue=&ddsub=&cr=17&csb=default&cs=ASC&MMOpt= | title=Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results}}</ref> and others. He has published over 190 scholarly papers <ref>{{cite web|title=Google Scholar|url=https://scholar.google.com/citations?user=fbkIhRYAAAAJ&hl=en&oi=ao|website=Google Scholar|accessdate=29 November 2016}}</ref><ref>http://orcid.org/0000-0002-0786-8377</ref> and two technical books: ''Statistics and Data Analysis for Microarrays Using R and Bioconductor'' and ''Data Analysis Tools for DNA Microarrays''.


He is an editor for [[IEEE/ACM Transactions on Computational Biology and Bioinformatics]],<ref>{{Cite web | url=https://www.computer.org/web/tcbb/about-tcbb;jsessionid=0c314b32fe1a7a0d6f1a94b2501d | title=About TCBB • IEEE Computer Society}}</ref> Current Protocols in Bioinformatics,<ref>{{Cite book | doi=10.1002/0471250953|title = Current Protocols in Bioinformatics|year = 2002|isbn = 9780471250951|last1 = Baxevanis|first1 = Andreas D.|editor5-first = John R|editor5-last = Yates|editor4-first = Gary D|editor4-last = Stormo|editor3-first = Lincoln D|editor3-last = Stein|editor2-first = William R|editor2-last = Pearson|editor1-first = Alex|editor1-last = Bateman| citeseerx=10.1.1.419.8061}}</ref> ''Journal of Biomedicine and Biotechnology'',<ref>{{Cite web | url=https://www.hindawi.com/journals/bmri/editors/bioinformatics/ | title=BioMed Research International: Bioinformatics}}</ref> and a senior editor of the ''Discoveries Journal''.<ref>{{Cite web | url=https://discoveriesjournals.org/editorial-board | title=Editorial Board of DISCOVERIES and DISCOVERIES REPORTS}}</ref>
He is an editor for [[IEEE/ACM Transactions on Computational Biology and Bioinformatics]],<ref>{{Cite web | url=https://www.computer.org/web/tcbb/about-tcbb;jsessionid=0c314b32fe1a7a0d6f1a94b2501d | title=About TCBB • IEEE Computer Society}}</ref> Current Protocols in Bioinformatics,<ref>{{Cite book | doi=10.1002/0471250953|title = Current Protocols in Bioinformatics|year = 2002|isbn = 9780471250951|last1 = Baxevanis|first1 = Andreas D.|editor5-first = John R|editor5-last = Yates|editor4-first = Gary D|editor4-last = Stormo|editor3-first = Lincoln D|editor3-last = Stein|editor2-first = William R|editor2-last = Pearson|editor1-first = Alex|editor1-last = Bateman| citeseerx=10.1.1.419.8061}}</ref> ''Journal of Biomedicine and Biotechnology'',<ref>{{Cite web | url=https://www.hindawi.com/journals/bmri/editors/bioinformatics/ | title=BioMed Research International: Bioinformatics}}</ref> and a senior editor of the ''Discoveries Journal''.<ref>{{Cite web | url=https://discoveriesjournals.org/editorial-board | title=Editorial Board of DISCOVERIES and DISCOVERIES REPORTS}}</ref>

Revision as of 14:17, 24 June 2020

Sorin Drăghici
CitizenshipUnited States
Alma materUniversity of St Andrews, UK
Scientific career
FieldsComputer Science, Bioinformatics, Computational biology, Machine learning, Neural networks, and Biomedical Informatics
InstitutionsWayne State University
Doctoral advisorMichael K. Weir

Sorin Drăghici is a Romanian-American computer scientist, the Associate Dean for Entrepreneurship and Innovation of Wayne State University's College of Engineering, and the Director of the James and Patricia Anderson Engineering Ventures Institute.[1][2]

Biography

Draghici was born and raised in Bucharest, Romania. He studied computer engineering at the Politehnica University of Bucharest from where he obtained an M.Sc. He completed a Ph.D. in Computer Science at the University of St Andrews, UK in the area of deep learning/neural networks. He joined the Computer Science Department at Wayne State University in 1996.[citation needed]

Current position

Draghici is a Professor in the Department of Computer Science College of Engineering and Obstetrics and Gynecology in the School of Medicine. He is also the current holder of the Robert J. Sokol Endowed Chair in Systems Biology in Reproduction and a member of the Board of Directors for TechTown, Wayne State University's research park and business incubator.[3] Draghici is also the founder and CEO of AdvaitaBio.

Research

His research area is computational biology and bioinformatics, in particular GO analysis,[4][5] pathway analysis,[6][7][8][9][10][11] meta-analysis[12][13][14][15][16][17], and drug repurposing[18][19]. His research has been supported by the National Science Foundation,[20] National Health Institutes [21][22][23][24][25][26] and others. He has published over 190 scholarly papers [27][28] and two technical books: Statistics and Data Analysis for Microarrays Using R and Bioconductor and Data Analysis Tools for DNA Microarrays.

He is an editor for IEEE/ACM Transactions on Computational Biology and Bioinformatics,[29] Current Protocols in Bioinformatics,[30] Journal of Biomedicine and Biotechnology,[31] and a senior editor of the Discoveries Journal.[32]

References

  1. ^ "Anderson Institute - Entrepreneurship and the Anderson Institute - Wayne State University".
  2. ^ "Entrepreneurship and the Anderson Institute - Wayne State University".
  3. ^ "TechTown Detroit names two new board members".
  4. ^ Khatri, Purvesh; Draghici, Sorin; Ostermeier, G.Charles; Krawetz, Stephen A. (February 2002). "Profiling Gene Expression Using Onto-Express". Genomics. 79 (2): 266–270. doi:10.1006/geno.2002.6698.
  5. ^ Drǎghici, Sorin; Khatri, Purvesh; Martins, Rui P.; Ostermeier, G.Charles; Krawetz, Stephen A. (February 2003). "Global functional profiling of gene expression☆☆This work was funded in part by a Sun Microsystems grant awarded to S.D., NIH Grant HD36512 to S.A.K., a Wayne State University SOM Dean's Post-Doctoral Fellowship, and an NICHD Contraception and Infertility Loan to G.C.O. Support from the WSU MCBI mode is gratefully appreciated". Genomics. 81 (2): 98–104. doi:10.1016/S0888-7543(02)00021-6.
  6. ^ Draghici, S.; Khatri, P.; Tarca, A. L.; Amin, K.; Done, A.; Voichita, C.; Georgescu, C.; Romero, R. (2007-09-04). "A systems biology approach for pathway level analysis". Genome Research. 17 (10): 1537–1545. doi:10.1101/gr.6202607. ISSN 1088-9051. PMC 1987343. PMID 17785539.
  7. ^ Donato, Michele; Xu, Zhonghui; Tomoiaga, Alin; Granneman, James G.; MacKenzie, Robert G.; Bao, Riyue; Than, Nandor Gabor; Westfall, Peter H.; Romero, Roberto; Draghici, Sorin (2013-11). "Analysis and correction of crosstalk effects in pathway analysis". Genome Research. 23 (11): 1885–1893. doi:10.1101/gr.153551.112. ISSN 1088-9051. PMC 3814888. PMID 23934932. {{cite journal}}: Check date values in: |date= (help)CS1 maint: PMC format (link)
  8. ^ Tarca, Adi Laurentiu; Draghici, Sorin; Bhatti, Gaurav; Romero, Roberto (2012-12). "Down-weighting overlapping genes improves gene set analysis". BMC Bioinformatics. 13 (1): 136. doi:10.1186/1471-2105-13-136. ISSN 1471-2105. PMC 3443069. PMID 22713124. {{cite journal}}: Check date values in: |date= (help)CS1 maint: PMC format (link) CS1 maint: unflagged free DOI (link)
  9. ^ Hanoudi, Samer; Donato, Michele; Draghici, Sorin (2017-05-09). Escriva, Hector (ed.). "Identifying biologically relevant putative mechanisms in a given phenotype comparison". PLOS ONE. 12 (5): e0176950. doi:10.1371/journal.pone.0176950. ISSN 1932-6203. PMC 5423614. PMID 28486531.{{cite journal}}: CS1 maint: PMC format (link) CS1 maint: unflagged free DOI (link)
  10. ^ Hanoudi, Samer; Donato, Michele; Draghici, Sorin (2017-05-09). Escriva, Hector (ed.). "Identifying biologically relevant putative mechanisms in a given phenotype comparison". PLOS ONE. 12 (5): e0176950. doi:10.1371/journal.pone.0176950. ISSN 1932-6203. PMC 5423614. PMID 28486531.{{cite journal}}: CS1 maint: PMC format (link) CS1 maint: unflagged free DOI (link)
  11. ^ Nguyen, Tuan-Minh; Shafi, Adib; Nguyen, Tin; Draghici, Sorin (2019-12). "Identifying significantly impacted pathways: a comprehensive review and assessment". Genome Biology. 20 (1): 203. doi:10.1186/s13059-019-1790-4. ISSN 1474-760X. PMC 6784345. PMID 31597578. {{cite journal}}: Check date values in: |date= (help)CS1 maint: PMC format (link) CS1 maint: unflagged free DOI (link)
  12. ^ Nguyen, Tin; Tagett, Rebecca; Donato, Michele; Mitrea, Cristina; Draghici, Sorin (2016-02-01). "A novel bi-level meta-analysis approach: applied to biological pathway analysis". Bioinformatics. 32 (3): 409–416. doi:10.1093/bioinformatics/btv588. ISSN 1367-4803. PMC 5006307. PMID 26471455.{{cite journal}}: CS1 maint: PMC format (link)
  13. ^ Nguyen, Tin; Diaz, Diana; Draghici, Sorin (2016-10-02). "TOMAS: A novel TOpology-aware Meta-Analysis approach applied to System biology". Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Seattle WA USA: ACM: 13–22. doi:10.1145/2975167.2975168. ISBN 978-1-4503-4225-4.
  14. ^ Nguyen, Tin; Mitrea, Cristina; Tagett, Rebecca; Draghici, Sorin (2017-03). "DANUBE: Data-Driven Meta-ANalysis Using UnBiased Empirical Distributions—Applied to Biological Pathway Analysis". Proceedings of the IEEE. 105 (3): 496–515. doi:10.1109/JPROC.2015.2507119. ISSN 0018-9219. {{cite journal}}: Check date values in: |date= (help)
  15. ^ Shafi, Adib; Nguyen, Tin; Peyvandipour, Azam; Draghici, Sorin (2019-07-22). Kelso, Janet (ed.). "GSMA: an approach to identify robust global and test Gene Signatures using Meta-Analysis". Bioinformatics: btz561. doi:10.1093/bioinformatics/btz561. ISSN 1367-4803.
  16. ^ Shafi, Adib; Nguyen, Tin; Peyvandipour, Azam; Nguyen, Hung; Draghici, Sorin (2019-03-19). "A Multi-Cohort and Multi-Omics Meta-Analysis Framework to Identify Network-Based Gene Signatures". Frontiers in Genetics. 10: 159. doi:10.3389/fgene.2019.00159. ISSN 1664-8021. PMC 6434849. PMID 30941158.{{cite journal}}: CS1 maint: PMC format (link) CS1 maint: unflagged free DOI (link)
  17. ^ Nguyen, Tin; Shafi, Adib; Nguyen, Tuan-Minh; Schissler, A. Grant; Draghici, Sorin (2020-12). "NBIA: a network-based integrative analysis framework – applied to pathway analysis". Scientific Reports. 10 (1): 4188. doi:10.1038/s41598-020-60981-9. ISSN 2045-2322. PMC 7060280. PMID 32144346. {{cite journal}}: Check date values in: |date= (help)CS1 maint: PMC format (link)
  18. ^ Saberian, Nafiseh; Peyvandipour, Azam; Donato, Michele; Ansari, Sahar; Draghici, Sorin (2019-10-01). Kelso, Janet (ed.). "A new computational drug repurposing method using established disease–drug pair knowledge". Bioinformatics. 35 (19): 3672–3678. doi:10.1093/bioinformatics/btz156. ISSN 1367-4803. PMC 6761937. PMID 30840053.{{cite journal}}: CS1 maint: PMC format (link)
  19. ^ Peyvandipour, Azam; Saberian, Nafiseh; Shafi, Adib; Donato, Michele; Draghici, Sorin (2018-08-15). Valencia, Alfonso (ed.). "A novel computational approach for drug repurposing using systems biology". Bioinformatics. 34 (16): 2817–2825. doi:10.1093/bioinformatics/bty133. ISSN 1367-4803. PMC 6084573. PMID 29534151.{{cite journal}}: CS1 maint: PMC format (link)
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