LacED
| Content | |
|---|---|
| Description | Database of Beta-lactamases that allows reconciliation of TEM Beta-lactamase information against NCBI |
| Data types captured | Beta-lactamase |
| Organisms | Bacteria |
| Contact | |
| Primary citation | PMID 19698099 |
| Access | |
| Website | www |
| Miscellaneous | |
| Bookmarkable entities | yes |
LacED, also known as The Lactamase Engineering Database is a database that identifies and corrects inconsistencies in already existing databases, namely Beta-lactamases. It integrates such information as mutations, sequence alignments, and structures in order to accomplish the task.[1] As of the publication of the primary literature, LacED provides 2399 sequences entries and 37 structure entries.[1] Example of this database in action is shown when 89 proteins from the microbial organisms and 35 proteins from cloning or expression vectors had new mutation profiles.[1] Additionally, 55 proteins had inconsistent annotations in their TEM assignments or mutation profiles.[1]
See also
References
- ^ a b c d Thai, Quan; Bös, Fabian; Pleiss, Jürgen (2009). "The Lactamase Engineering Database: a critical survey of TEM sequences in public databases". BMC Genomics. 10 (1): 390. doi:10.1186/1471-2164-10-390. ISSN 1471-2164. PMC 2742552.
{{cite journal}}: CS1 maint: unflagged free DOI (link)
 | This Biological database-related article is a stub. You can help Wikipedia by expanding it. |