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Christoph Steinbeck

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Christoph Steinbeck
Christoph Steinbeck
Christoph Steinbeck
Born1966 (age 57–58)[3]
NationalityGerman
Alma materUniversity of Bonn
Known for
AwardsBlue Obelisk award[1]
Scientific career
Fields
Institutions
ThesisLUCY, ein Programm zur Konstitutionsbestimmung aus Korrelations-NMR-Experimenten sowie Beispiele zur Identifizierung von Naturstoffen durch NMR-Spektroskopie (1995)
Websitewww.steinbeck-molecular.de

Christoph Steinbeck is a chemist born in Neuwied[4] in 1966 and has a professorship for analytical chemistry, cheminformatics and chemometrics at the Friedrich-Schiller-Universität Jena in Thuringia, Germany.[5][6]

Education

Steinbeck received his PhD from the University of Bonn[7] in 1995 for work on LUCY, a software program for structural elucidation from nuclear magnetic resonance (NMR) correlation experiments.[8] In 2003 he received his habilitation.[9]

Research

Steinbeck's research interests[2][10][11][12] have involved the elucidation of chemical structures of metabolites. He was one of the first chemists to develop open source tools for cheminformatics. He initiated JChemPaint,[13] was founder of the Chemistry Development Kit,[14][15] and is responsible for leading the team working on Chemical Entities of Biological Interest (ChEBI).[16][17][18][19] He headed the Cheminformatics and Metabolomics group at the European Molecular Biology Laboratory-European Bioinformatics Institute in Cambridge, United Kingdom from 2008 to 2016. He became a professor for analytical chemistry, cheminformatics and chemometrics at the Friedrich-Schiller-Universität Jena in Thuringia, Germany in March 2017. Together with a few other chemists he was a founder member of the Blue Obelisk[20][21] movement in 2005.[22]

Steinbeck is editor-in-chief of the Journal of Cheminformatics, director of the Metabolomics Society,[23] past chair of the Computers-Information-Chemistry division of the German Chemical Society, past trustee of the Chemical Structure Association Trust,[24] and a lifetime member of the World Association of Theoretically Oriented Chemists.[25]

References

  1. ^ Murray-Rust, P. Blue Obelisk Award – Christoph Steinbeck of CDK. http://blogs.ch.cam.ac.uk/pmr/2006/09/14/blue-obelisk-award-christoph-steinbeck-of-cdk/
  2. ^ a b Christoph Steinbeck publications indexed by Google Scholar Edit this at Wikidata
  3. ^ "Steinbeck, Christoph". DNB, Katalog der Deutschen Nationalbibliothek. German National Library. GND 128763922. {{cite web}}: Missing or empty |url= (help)
  4. ^ www.metabolomicssociety.org/people/christoph-steinbeck
  5. ^ Alcántara, R; Onwubiko, J; Cao, H; Matos, Pd; Cham, J. A.; Jacobsen, J; Holliday, G. L.; Fischer, J. D.; Rahman, S. A.; Jassal, B; Goujon, M; Rowland, F; Velankar, S; López, R; Overington, J. P.; Kleywegt, G. J.; Hermjakob, H; O'Donovan, C; Martín, M. J.; Thornton, J. M.; Steinbeck, C (2013). "The EBI enzyme portal". Nucleic Acids Research. 41 (Database issue): D773–80. doi:10.1093/nar/gks1112. PMC 3531056. PMID 23175605.
  6. ^ Orchard, S; Al-Lazikani, B; Bryant, S; Clark, D; Calder, E; Dix, I; Engkvist, O; Forster, M; Gaulton, A; Gilson, M; Glen, R; Grigorov, M; Hammond-Kosack, K; Harland, L; Hopkins, A; Larminie, C; Lynch, N; Mann, R. K.; Murray-Rust, P; Lo Piparo, E; Southan, C; Steinbeck, C; Wishart, D; Hermjakob, H; Overington, J; Thornton, J (2011). "Minimum information about a bioactive entity (MIABE)". Nature Reviews Drug Discovery. 10 (9): 661–9. doi:10.1038/nrd3503. PMID 21878981.
  7. ^ Steinbeck, Christoph (1995). LUCY, ein Programm zur Konstitutionsbestimmung aus Korrelations-NMR-Experimenten sowie Beispiele zur Identifizierung von Naturstoffen durch NMR-Spektroskopie (PhD thesis). University of Bonn. DNB-IDN 948048905.
  8. ^ Steinbeck, C. (1996). "LUCY—A Program for Structure Elucidation from NMR Correlation Experiments". Angewandte Chemie International Edition in English. 35 (17): 1984–1986. doi:10.1002/anie.199619841.
  9. ^ Steinbeck, Christoph (2003). Zur automatischen Strukturaufklärung organischer Verbindungen (Habilitation thesis). University of Bonn. DNB-IDN 970193602.
  10. ^ Christoph Steinbeck publications indexed by Microsoft Academic
  11. ^ Christoph Steinbeck at DBLP Bibliography Server Edit this at Wikidata
  12. ^ Christoph Steinbeck's publications indexed by the Scopus bibliographic database. (subscription required)
  13. ^ Krause, S.; Willighagen, E.; Steinbeck, C. (2000). "JChemPaint - Using the Collaborative Forces of the Internet to Develop a Free Editor for 2D Chemical Structures". Molecules. 5 (12): 93–98. doi:10.3390/50100093.
  14. ^ Steinbeck, C.; Han, Y.; Kuhn, S.; Horlacher, O.; Luttmann, E.; Willighagen, E. (2003). "The Chemistry Development Kit (CDK): An Open-Source Java Library for Chemo- and Bioinformatics". Journal of Chemical Information and Modeling. 43 (2): 493–500. doi:10.1021/ci025584y. PMC 4901983. PMID 12653513.
  15. ^ Steinbeck, C.; Hoppe, C.; Kuhn, S.; Floris, M.; Guha, R.; Willighagen, E. (2006). "Recent Developments of the Chemistry Development Kit (CDK) - an Open-Source Java Library for Chemo- and Bioinformatics" (PDF). Current Pharmaceutical Design. 12 (17): 2111–2120. doi:10.2174/138161206777585274. PMID 16796559.
  16. ^ Hastings, J.; De Matos, P.; Dekker, A.; Ennis, M.; Harsha, B.; Kale, N.; Muthukrishnan, V.; Owen, G.; Turner, S.; Williams, M.; Steinbeck, C. (2012). "The ChEBI reference database and ontology for biologically relevant chemistry: Enhancements for 2013". Nucleic Acids Research. 41 (Database issue): D456–D463. doi:10.1093/nar/gks1146. PMC 3531142. PMID 23180789.
  17. ^ Matos, P.; Adams, N.; Hastings, J.; Moreno, P.; Steinbeck, C. (2012). "A Database for Chemical Proteomics: ChEBI". Chemical Proteomics. Methods in Molecular Biology. Vol. 803. pp. 273–296. doi:10.1007/978-1-61779-364-6_19. ISBN 978-1-61779-363-9. PMID 22065232.
  18. ^ Degtyarenko, K.; Hastings, J.; De Matos, P.; Ennis, M. (2009). "ChEBI: An Open Bioinformatics and Cheminformatics Resource". In Andreas D. Baxevanis (ed.). Current Protocols in Bioinformatics. Vol. 14. pp. Unit Un14.9. doi:10.1002/0471250953.bi1409s26. ISBN 978-0471250951. PMID 19496059.
  19. ^ Degtyarenko, K.; De Matos, P.; Ennis, M.; Hastings, J.; Zbinden, M.; McNaught, A.; Alcantara, R.; Darsow, M.; Guedj, M.; Ashburner, M. (2007). "ChEBI: A database and ontology for chemical entities of biological interest". Nucleic Acids Research. 36 (Database issue): D344–D350. doi:10.1093/nar/gkm791. PMC 2238832. PMID 17932057.
  20. ^ O'Boyle, N. M.; Guha, R.; Willighagen, E. L.; Adams, S. E.; Alvarsson, J.; Bradley, J. C.; Filippov, I. V.; Hanson, R. M.; Hanwell, M. D.; Hutchison, G. R.; James, C. A.; Jeliazkova, N.; Lang, A. S. D.; Langner, K. M.; Lonie, D. C.; Lowe, D. M.; Pansanel, J. R. M.; Pavlov, D.; Spjuth, O.; Steinbeck, C.; Tenderholt, A. L.; Theisen, K. J.; Murray-Rust, P. (2011). "Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on". Journal of Cheminformatics. 3 (1): 37. doi:10.1186/1758-2946-3-37. PMC 3205042. PMID 21999342.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  21. ^ Guha, R.; Howard, M. T.; Hutchison, G. R.; Murray-Rust, P.; Rzepa, H.; Steinbeck, C.; Wegner, J.; Willighagen, E. L. (2006). "The Blue Obelisk - Interoperability in Chemical Informatics". Journal of Chemical Information and Modeling. 46 (3): 991–998. doi:10.1021/ci050400b. PMC 4878861. PMID 16711717.
  22. ^ Guha, R.; Howard, M. T.; Hutchison, G. R.; Murray-Rust, P.; Rzepa, H.; Steinbeck, C.; Wegner, J.; Willighagen, E. L. (2006). "The Blue Obelisk - Interoperability in Chemical Informatics". Journal of Chemical Information and Modeling. 46 (3): 991–998. doi:10.1021/ci050400b. PMC 4878861. PMID 16711717.
  23. ^ Metabolomics Society Board Archived 2014-03-23 at the Wayback Machine, website of Metabolomics Society
  24. ^ Chemical Structure Association Newsletter, 2006, 12, http://www.csa-trust.org/news06/Issue12.pdf Archived 2016-03-26 at the Wayback Machine
  25. ^ http://www.watoc.net/watoc.members.html