Blue–white screen

A LB agar plate showing the result of a blue white screen.

The blue-white screen is a molecular technique that allows for the detection of successful ligations in vector-based gene cloning. DNA of interest is ligated into a vector. The vector is then transformed into competent cell (bacteria). The competent cells are grown in the presence of X-gal. If the ligation was successful, the bacterial colony will be white; if not, the colony will be blue. This technique allows for the quick and easy detection of successful ligation, without the need to individually test each colony. == Cloning, alongside PCR, is one of the most common techniques in molecular biology. Blue white screening makes this procedure less time and labor intensive by allowing for the screening of successful cloning reactions through the colour of the bacterial colony.

The molecular mechanism for blue/white screening is based on a genetic engineering of the lac operon in the Escherichia coli laboratory strain serving as a host cell combined with a subunit complementation achieved with the cloning vector. The vector (e.g. pBluescript) encodes the α subunit of LacZ protein with an internal multiple cloning site (MCS), while the chromosome of the host strain encodes the remaining Ω subunit to form a functional β-galactosidase enzyme. The MCS can be cleaved by different restriction enzymes so that the foreign DNA can be inserted within the lacZα gene, thus disrupting the production of functional β-galactosidase. The chemical required for this screen is X-gal, a colourless modified galactose sugar that is metabolized by β-galactosidase to form an insoluble product which is bright blue, and thus functions as an indicator. Isopropyl β-D-1-thiogalactopyranoside(IPTG), which functions as the inducer of the Lac operon, can be used in some strains to enhance the phenotype, although it is with many common laboratory strains unnecessary. The hydrolysis of colourless X-gal by the β-galactosidase causes the characteristic blue colour in the colonies; it shows that the colonies contain unligated vector. White colonies indicate insertion of foreign DNA and loss of the cells' ability to hydrolyse the marker.

Bacterial colonies in general, however, are white, and so a bacterial colony with no vector at all will also appear white. These are usually suppressed by the presence of an antibiotic in the growth medium. A resistance gene on the vector allows successfully transformed bacteria to survive despite the presence of the antibiotic.

The correct type of vector and competent cells are important considerations when planning a blue white screen.

It is also important to understand the lac operon is regulated by cAMP levels and the binding of cAMP to CAP. This CAP-cAMP complex promotes the binding of RNA polymerase to the lac promoter, which leads to transcription of the lac genes. cAMP levels are regulated by the cell's incorporation of glucose. Since most bacteria preferentially utilize glucose even in the presence of lactose, the lac genes will only be turned on when glucose levels drop low enough to allow the CAP-cAMP complex to form.

Drawback

Some white colonies may not contain the recombinant vector. The LacZ, in the vector transformed into the cells of colonies, may be non-functional and cannot produce beta-galactosidase. As a result, these cells cannot convert X-gal to the blue substance. On the other hand, in some cases, blue colonies may contain the insert. This occurs when the insert is "in frame" with the LacZα gene and it does not have a STOP codon. This could sometimes lead to the expression of a fusion protein that is still functional as LacZα.

See also

• Recombinant DNA