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Domine Database

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This is an old revision of this page, as edited by Egon Willighagen (talk | contribs) at 07:25, 11 June 2016 (No, it's not free. The ToS write: "It is forbidden to redistribute any of the Content of this Web Site...", see http://domine.utdallas.edu/cgi-bin/Domine?page=help#terms). The present address (URL) is a permanent link to this revision, which may differ significantly from the current revision.

DOMINE
Content
Descriptioncomprehensive collection of known and predicted domain-domain interactions.
Contact
Research centerNational Institute of Environmental Health Sciences, National Institutes of Health
LaboratorySystems Biology
Primary citationYellaboina et al. (2011)[1]
Release date2010
Access
Websitehttp://domine.utdallas.edu

DOMINE is a database of known and predicted protein domain interactions (or domain-domain interactions).[1] It contains interactions observed in PDB crystal structures, and those predicted by several computational approaches. DOMINE uses Pfam HMM profiles for protein domain definitions. The DOMINE database contains 26,219 interactions among 5,410 domains), which includes 6,634 known interactions inferred from PDB structure data.

References

  1. ^ a b Yellaboina; et al. (Jan 2011). "DOMINE: a comprehensive collection of known and predicted domain-domain interactions". Nucleic Acids Res. 39 (Database issue). England: D730-5. doi:10.1093/nar/gkq1229. PMC 3013741. PMID 21113022. {{cite journal}}: Cite has empty unknown parameters: |laysource=, |laydate=, and |laysummary= (help)

See also

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