Pan-cancer analysis
Pan-Cancer Analysis aims to examine the similarities and differences among the genomic and cellular alterations found across diverse tumor types.[1][2] The Cancer Genome Atlas (TCGA) Research Network has developed an integrated picture of commonalities, differences and emergent themes across tumor types. A dozen of papers about Pan-Cancer have been published in outstanding peer-review journals, such as Nature, Cell, Nature Genetics, etc. Nature created a focus on TCGA Pan-Cancer Analysis.
Databases
Recently were created Pan-Cancer resources [3] for the Networks Of lncRNAs, microRNAs, CeRNAs And RNA-Binding Proteins(RBPs)].
External links
References:
- ^ Cancer Genome Atlas Research, Network; Weinstein, JN; Collisson, EA; Mills, GB; Shaw, KR; Ozenberger, BA; Ellrott, K; Shmulevich, I; Sander, C; Stuart, JM (Oct 2013). "The Cancer Genome Atlas Pan-Cancer analysis project". Nature Genetics. 45 (10): 1113–20. doi:10.1038/ng.2764. PMC 3919969. PMID 24071849.
- ^ Omberg, L; Ellrott, K; Yuan, Y; Kandoth, C; Wong, C; Kellen, MR; Friend, SH; Stuart, J; Liang, H; Margolin, AA (Oct 2013). "Enabling transparent and collaborative computational analysis of 12 tumor types within The Cancer Genome Atlas". Nature Genetics. 45 (10): 1121–6. doi:10.1038/ng.2761. PMC 3950337. PMID 24071850.
- ^ Li, JH; Liu, S; Zhou, H; Qu, LH; Yang, JH (January 2014). "starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data". Nucleic Acids Research. 42 (Database issue): D92-7. doi:10.1093/nar/gkt1248. PMID 24297251.