Intrasporangiaceae: Difference between revisions
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'''Intrasporangiaceae''' is an [[Actinomycete]] family that is [[paraphyletic]] with respect to the families [[Dermatophilaceae]] and [[Dermacoccaceae]], i.e. the families [[Dermatophilaceae]] and [[Dermacoccaceae]] are nested within the clade Intrasporangiaceae. The family is named after the type genus ''[[Intrasporangium]]''. The type species of ''Intrasporangium'' (''[[Intrasporangium calvum|I. calvum]]'') |
'''Intrasporangiaceae''' is an [[Actinomycete]] family that is [[paraphyletic]] with respect to the families [[Dermatophilaceae]] and [[Dermacoccaceae]], i.e. the families [[Dermatophilaceae]] and [[Dermacoccaceae]] are nested within the clade Intrasporangiaceae. The family is named after the type genus ''[[Intrasporangium]]''. The type species of ''Intrasporangium'' (''[[Intrasporangium calvum|I. calvum]]'') was originally thought to form [[endospore]]s; however, the mycelium of this strain may bear intercalary vesicles that were originally identified as spores.<ref>{{cite journal |last1=Glavina Del Rio |first1=Tijana |last2=Chertkov |first2=Olga |last3=Yasawong |first3=Montri |last4=Lucas |first4=Susan |last5=Deshpande |first5=Shweta |last6=Cheng |first6=Jan-Fang |last7=Detter |first7=Chris |last8=Tapia |first8=Roxanne |last9=Han |first9=Cliff |last10=Goodwin |first10=Lynne |last11=Pitluck |first11=Sam |last12=Liolios |first12=Konstantinos |last13=Ivanova |first13=Natalia |last14=Mavromatis |first14=Konstantinos |last15=Pati |first15=Amrita |last16=Chen |first16=Amy |last17=Palaniappan |first17=Krishna |last18=Land |first18=Miriam |last19=Hauser |first19=Loren |last20=Chang |first20=Yun-Juan |last21=Jeffries |first21=Cynthia D. |last22=Rohde |first22=Manfred |last23=Pukall |first23=Rüdiger |last24=Sikorski |first24=Johannes |last25=Göker |first25=Markus |last26=Woyke |first26=Tanja |last27=Bristow |first27=James |last28=Eisen |first28=Jonathan A. |last29=Markowitz |first29=Victor |last30=Hugenholtz |first30=Philip |last31=Kyrpides |first31=Nikos C. |last32=Klenk |first32=Hans-Peter |last33=Lapidus |first33=Alla |title=Complete genome sequence of Intrasporangium calvum type strain (7 KIPT) |journal=Standards in Genomic Sciences |date=2010 |volume=3 |issue=3 |pages=294–303 |doi=10.4056/sigs.1263355}}</ref> No members of Intrasporangiaceae are known to form spores. |
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==Phylogeny== |
==Phylogeny== |
Revision as of 19:47, 16 October 2020
Intrasporangiaceae | |
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Scientific classification | |
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Family: | Intrasporangiaceae
Rainey et al. 1997 emend. Zhi et al. 2009 |
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Intrasporangiaceae is an Actinomycete family that is paraphyletic with respect to the families Dermatophilaceae and Dermacoccaceae, i.e. the families Dermatophilaceae and Dermacoccaceae are nested within the clade Intrasporangiaceae. The family is named after the type genus Intrasporangium. The type species of Intrasporangium (I. calvum) was originally thought to form endospores; however, the mycelium of this strain may bear intercalary vesicles that were originally identified as spores.[1] No members of Intrasporangiaceae are known to form spores.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI)[3] and the phylogeny is based on 16S rRNA-based LTP release 106 by The All-Species Living Tree Project [4]
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Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)
References
- ^ Glavina Del Rio, Tijana; Chertkov, Olga; Yasawong, Montri; Lucas, Susan; Deshpande, Shweta; Cheng, Jan-Fang; Detter, Chris; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D.; Rohde, Manfred; Pukall, Rüdiger; Sikorski, Johannes; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter; Lapidus, Alla (2010). "Complete genome sequence of Intrasporangium calvum type strain (7 KIPT)". Standards in Genomic Sciences. 3 (3): 294–303. doi:10.4056/sigs.1263355.
- ^ J.P. Euzéby. "Intrasporangiaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2013-01-27. Retrieved 2011-11-17.
- ^ Sayers; et al. "Intrasporangiaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2011-06-05.
- ^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2011-11-17.