Diphthamide: Difference between revisions
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{{chembox |
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| verifiedrevid = |
| verifiedrevid = 428011922 |
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| ImageFile = diphthamide.png |
| ImageFile = diphthamide.png |
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| ImageSize = 200px |
| ImageSize = 200px |
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| IUPACName = 2-Amino-3-[2-(3-carbamoyl-3-trimethylammonio-propyl)- |
| IUPACName = 2-Amino-3-[2-(3-carbamoyl-3-trimethylammonio-propyl)-3''H''-imidazol-4-yl]propanoate |
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| OtherNames = |
| OtherNames = |
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|Section1={{Chembox Identifiers |
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| ChemSpiderID_Ref = {{chemspidercite|correct|chemspider}} |
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| ChemSpiderID = 4942856 |
| ChemSpiderID = 4942856 |
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| InChI = 1/C13H23N5O3/c1-18(2,3)10(12(15)19)4-5-11-16-7-8(17-11)6-9(14)13(20)21/h7,9-10H,4-6,14H2,1-3H3,(H3-,15,16,17,19,20,21) |
| InChI = 1/C13H23N5O3/c1-18(2,3)10(12(15)19)4-5-11-16-7-8(17-11)6-9(14)13(20)21/h7,9-10H,4-6,14H2,1-3H3,(H3-,15,16,17,19,20,21) |
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| InChIKey = FOOBQHKMWYGHCE-UHFFFAOYAN |
| InChIKey = FOOBQHKMWYGHCE-UHFFFAOYAN |
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| SMILES1 = [O-]C(=O)C(N)Cc1cnc( |
| SMILES1 = [O-]C(=O)C(N)Cc1cnc([nH]1)CCC(C(=O)N)[N+](C)(C)C |
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| StdInChI_Ref = {{stdinchicite|correct|chemspider}} |
| StdInChI_Ref = {{stdinchicite|correct|chemspider}} |
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| StdInChI = 1S/C13H23N5O3/c1-18(2,3)10(12(15)19)4-5-11-16-7-8(17-11)6-9(14)13(20)21/h7,9-10H,4-6,14H2,1-3H3,(H3-,15,16,17,19,20,21) |
| StdInChI = 1S/C13H23N5O3/c1-18(2,3)10(12(15)19)4-5-11-16-7-8(17-11)6-9(14)13(20)21/h7,9-10H,4-6,14H2,1-3H3,(H3-,15,16,17,19,20,21) |
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| StdInChIKey_Ref = {{stdinchicite|correct|chemspider}} |
| StdInChIKey_Ref = {{stdinchicite|correct|chemspider}} |
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| StdInChIKey = FOOBQHKMWYGHCE-UHFFFAOYSA-N |
| StdInChIKey = FOOBQHKMWYGHCE-UHFFFAOYSA-N |
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| CASNo_Ref = {{cascite|correct|CAS}} |
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| CASNo = 75645-22-6 |
| CASNo = 75645-22-6 |
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| UNII_Ref = {{fdacite|correct|FDA}} |
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| UNII = 86L3ZZ4408 |
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|Section2={{Chembox Properties |
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| C=13 | H=23 | N=5 | O=3 |
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| MolarMass = 297.354 g/mol |
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|Section3={{Chembox Hazards | MainHazards = |
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| FlashPt = |
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| AutoignitionPt = |
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'''Diphthamide''' is a modified [[histidine]] [[amino acid]] found in |
'''Diphthamide''' is a post-translationally modified [[histidine]] [[amino acid]] found in archaeal and [[EEF2|eukaryotic elongation factor 2]] (eEF-2). |
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Dipthamide is named after the toxin produced by the bacterium ''[[Corynebacterium diphtheriae]]'', which targets diphthamide.<ref name="pmc4280834" /> Besides this toxin, it is also targeted by [[exotoxin A]] from ''[[Pseudomonas aeruginosa]]''.<ref name="pmc4280834" /><ref name=":2">{{cite journal | vauthors = Liu S, Wiggins JF, Sreenath T, Kulkarni AB, Ward JM, Leppla SH | title = Dph3, a small protein required for diphthamide biosynthesis, is essential in mouse development | journal = Molecular and Cellular Biology | volume = 26 | issue = 10 | pages = 3835–3841 | date = May 2006 | pmid = 16648478 | pmc = 1488998 | doi = 10.1128/MCB.26.10.3835-3841.2006 }}</ref> It is the only target of these toxins.<ref name=":2" /> |
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It is usually found at position H715 in mammalian eEF2 (H699 in yeast). This residue is modified by the protein encoded by the OVCA1 gene (homolog of [[DPH1]] in mice). DPH1 [[knockout mice]] are inviable while [[heterozygote]]s develop diverse types of [[carcinoma]]s and [[sarcoma]]s. In humans, OVCA1 is frequently found mutated in [[ovarian cancer]]. [[Loss of heterozygosity]] has taken place in 50% of benign tumours, and 90% of end-stage ovarian tumours. |
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==Structure and biosynthesis== |
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It is [[ADP ribosylation|ADP-ribosylated]] by [[diphtheria toxin]], hence the name, which renders the elongation factor inactive. |
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Diphthamide is proposed to be a 2-[3-carboxyamido-3-(trimethylammonio)propyl]histidine. Though this structure has been confirmed by [[X-ray crystallography]], its stereochemistry is uncertain.<ref name="pmc4280834" /><ref name=":0">{{cite journal | vauthors = Jørgensen R, Merrill AR, Andersen GR | title = The life and death of translation elongation factor 2 | journal = Biochemical Society Transactions | volume = 34 | issue = Pt 1 | pages = 1–6 | date = February 2006 | pmid = 16246167 | doi = 10.1042/BST20060001 }}</ref> |
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Diphthamide is biosynthesized from histidine and [[S-Adenosyl methionine|''S''-adenosyl methionine]] (SAM).<ref name="pmc4280834" /> The side chain bound to [[imidazole]] group and all [[Methyl group|methyl groups]] come from SAM. The whole synthesis takes place in three steps:<ref name="pmc4280834" /> |
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* transfer of 3-amino-3-carboxylpropyl group from SAM |
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* transfer of three methyl groups from SAM – synthesis of [[diphtine]] |
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* [[amidation]] – synthesis of diphthamide |
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In eukaryotes, this biosynthetic pathway contains a total of 7 genes (Dph1-7).<ref name="pmc4280834" /> |
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==Biological function== |
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Diphthamide ensures [[Translation (biology)|translation]] fidelity.<ref name=pmc4280834>{{cite journal | vauthors = Su X, Lin Z, Lin H | title = The biosynthesis and biological function of diphthamide | journal = Critical Reviews in Biochemistry and Molecular Biology | volume = 48 | issue = 6 | pages = 515–521 | date = 2013-11-01 | pmid = 23971743 | pmc = 4280834 | doi = 10.3109/10409238.2013.831023 }}</ref> |
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The presence or absence of diphthamide is known to affect [[NF-κB]] or death receptor pathways.<ref name=":1">{{cite journal | vauthors = Stahl S, da Silva Mateus Seidl AR, Ducret A, Kux van Geijtenbeek S, Michel S, Racek T, Birzele F, Haas AK, Rueger R, Gerg M, Niederfellner G, Pastan I, Brinkmann U | display-authors = 6 | title = Loss of diphthamide pre-activates NF-κB and death receptor pathways and renders MCF7 cells hypersensitive to tumor necrosis factor | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 112 | issue = 34 | pages = 10732–10737 | date = August 2015 | pmid = 26261303 | pmc = 4553792 | doi = 10.1073/pnas.1512863112 | doi-access = free | bibcode = 2015PNAS..11210732S }}</ref> |
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== References == |
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{{Reflist}} |
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[[Category:Amino acids]] |
[[Category:Amino acids]] |
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[[Category:Imidazoles]] |
[[Category:Imidazoles]] |
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[[Category:Quaternary ammonium compounds]] |
[[Category:Quaternary ammonium compounds]] |
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[[Category:Post-translational modification]] |
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[[Category:Zwitterions]] |