JAligner

Add links
From Wikipedia, the free encyclopedia

This is an old revision of this page, as edited by CatPath (talk | contribs) at 16:55, 2 April 2017 (Undid revision 734988839 by 70.95.86.186 (talk)coi editing, inappropriate link to personal website). The present address (URL) is a permanent link to this revision, which may differ significantly from the current revision.

JAligner is an open source Java implementation of the Smith-Waterman algorithm[1] with Gotoh's improvement[2] for biological local pairwise sequence alignment using the affine gap penalty model. It was written by Ahmed Moustafa.

See also

References

  1. ^ Smith TF and Waterman MS (1981). Identification of common molecular subsequences. J Mol Biol, 147:195-197.
  2. ^ Gotoh O (1982). An improved algorithm for matching biological sequences. J Mol Biol, 162:705-708.

External links

Stub icon 1 Stub icon 2

This bioinformatics-related article is a stub. You can help Wikipedia by expanding it.

Retrieved from "https://en.wikipedia.org/w/index.php?title=JAligner&oldid=773474363"