ZBED1

ZBED1
Available structures
PDB	Human UniProt search: PDBe RCSB
List of PDB id codes
	2CT5
Identifiers
Aliases	ZBED1, ALTE, DREF, TRAMP, hDREF, zinc finger BED-type containing 1
External IDs	OMIM: 300178; HomoloGene: 123965; GeneCards: ZBED1; OMA:ZBED1 - orthologs
Gene location (Human)
Chr.	X chromosome (human)
End	2,500,976 bp
RNA expression pattern
	Top expressed in
	glutes; ; gastrocnemius muscle; ; quadriceps femoris muscle; ; vastus lateralis muscle; ; ganglionic eminence; ; skin of thigh; ; ventricular zone; ; skeletal muscle tissue; ; muscle of arm; ; biceps brachii;
	n/a
	More reference expression data
	n/a
Gene ontology
Molecular function	DNA binding; transposase activity; protein binding; protein dimerization activity; metal ion binding; RNA polymerase II transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; identical protein binding; SUMO transferase activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific; sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific;
Cellular component	nuclear chromosome; nucleus; nucleoplasm;
Biological process	regulation of transcription by RNA polymerase II; protein sumoylation; transcription by RNA polymerase II; positive regulation of transcription by RNA polymerase II;
	Sources:Amigo / QuickGO
Orthologs
	9189
	n/a
	ENSG00000214717
	n/a
	O96006
	n/a
	NM_004729; NM_001171135; NM_001171136
	n/a
	NP_001164606; NP_001164607; NP_004720
	n/a
	Wikidata
View/Edit Human

Zinc finger BED domain-containing protein 1 is a protein that in humans is encoded by the ZBED1 gene.^[3]^[4]^[5]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000214717 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Nagase T, Ishikawa K, Suyama M, Kikuno R, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Apr 1999). "Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 5 (5): 277–86. doi:10.1093/dnares/5.5.277. PMID 9872452.
^ Esposito T, Gianfrancesco F, Ciccodicola A, Montanini L, Mumm S, D'Urso M, Forabosco A (Mar 1999). "A novel pseudoautosomal human gene encodes a putative protein similar to Ac-like transposases". Hum Mol Genet. 8 (1): 61–7. doi:10.1093/hmg/8.1.61. PMID 9887332.
^ "Entrez Gene: ZBED1 zinc finger, BED-type containing 1".

Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
Strausberg RL; Feingold EA; Grouse LH; et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
Ohshima N, Takahashi M, Hirose F (2003). "Identification of a human homologue of the DREF transcription factor with a potential role in regulation of the histone H1 gene". J. Biol. Chem. 278 (25): 22928–38. doi:10.1074/jbc.M303109200. PMID 12663651.
Gerhard DS; Wagner L; Feingold EA; et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
Rual JF; Venkatesan K; Hao T; et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
Lim J; Hao T; Shaw C; et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
Yamashita D; Komori H; Higuchi Y; et al. (2007). "Human DNA replication-related element binding factor (hDREF) self-association via hATC domain is necessary for its nuclear accumulation and DNA binding". J. Biol. Chem. 282 (10): 7563–75. doi:10.1074/jbc.M607180200. PMID 17209048. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
Yamashita D; Sano Y; Adachi Y; et al. (2007). "hDREF Regulates Cell Proliferation and Expression of Ribosomal Protein Genes". Mol. Cell. Biol. 27 (6): 2003–13. doi:10.1128/MCB.01462-06. PMC 1820502. PMID 17220279. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)

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[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000214717 – Ensembl, May 2017

[2] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9872452-3] Nagase T, Ishikawa K, Suyama M, Kikuno R, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Apr 1999). "Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 5 (5): 277–86. doi:10.1093/dnares/5.5.277. PMID 9872452.

[pmid9887332-4] Esposito T, Gianfrancesco F, Ciccodicola A, Montanini L, Mumm S, D'Urso M, Forabosco A (Mar 1999). "A novel pseudoautosomal human gene encodes a putative protein similar to Ac-like transposases". Hum Mol Genet. 8 (1): 61–7. doi:10.1093/hmg/8.1.61. PMID 9887332.

[entrez-5] "Entrez Gene: ZBED1 zinc finger, BED-type containing 1".

[1]

[2]

[3]

[4]

[5]

References

Further reading