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Aepinus may refer to:
- Aepinus (crater) named after Franz Aepinus
- Aepinus (genus), a genus of crabs
- Franz Ulrich Theodor Aepinus (1724–1802), a German natural philosopher
- Johannes Aepinus (Johann Hoeck) (1499–1553), a German Protestant theologian
| disambiguation page lists articles associated with the title Aepinus.
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