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Since 2004, he has toured worldwide with blues guitarist Matt Schofield as part of the Matt Schofield Trio, and has performed on all of Schofield's albums to-date. Henderson also plays regularly with the guitarist and singer Ian Siegal, on whose albums and DVDs he appears.
2016 saw him perform on Blueberry Pie, an album by Suzy Starlite and Simon Campbell of the Starlite Campbell Band.
- 2004: Matt Schofield - The Trio, Live
- 2005: Matt Schofield - Live at the Jazz Café
- 2005: Matt Schofield - Siftin' Thru' Ashes
- 2005: Ian Siegal - Meat & Potatoes
- 2006: Otis Grand - Hipster Blues
- 2007: Ian Siegal - Swagger
- 2007: Matt Schofield - Ear To The Ground
- 2009: Matt Schofield - Heads, Tails & Aces
- 2009: Ian Siegal - Broadside
- 2009: Jonny Henderson - Where Did I Leave My Keys?
- 2010: Matt Schofield - Live From the Archive
- 2011: Matt Schofield - Anything But Time
- 2016: Starlite Campbell Band - Blueberry Pie
- December 2005: BBC Radio 2 - Paul Jones' annual round up (with the Matt Schofield Trio)
- June 2009: BBC Radio 2 - Paul Jones Rhythm and Blues Show (with the Matt Schofield Band)