Paraburkholderia
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| Genus: | Paraburkholderia Sawana et al. 2014[1]
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Paraburkholderia is a genus of Proteobacteria that are gram negative, slightly curved rods that are motile by means of flagella. Unlike Burkholderia species, Paraburkholderia members are not commonly associated with human infection. Paraburkholderia members form a monophyletic clade within the Burkholderiaceae family, which is what prompted their distinction as a genus independent from Burkholderia species, in combination with the finding of robust conserved signature indels which are unique to Paraburkholderia species, and are lacking in members of the Burkholderia genus.[1] These CSIs distinguish the genus from all other bacteria. Additionally, the CSIs that were found to be shared by Burkholderia species are absent in Paraburkholderia, providing evidence of separate lineages.[2]
Conserved signature indels have also been found within the Paraburkholderia genus.[1] These CSIs are in parallel with phylogenomic analyses that indicate to two monophyletic clades within the genus; one clade harbours unnamed and Candidatus Paraburkholderia, while the other clade is inclusive of environmental Paraburkholderia, commonly used for agricultural purposes.[3] CSIs have been found exclusive to each of these clades, and have not been found specific for any other combination of Paraburkholderia species, providing an additional level of phylogenetic resolution within the genus level.[1][2]
Species
Paraburkholderia comprises the following species:[1][4]
- Paraburkholderia acidipaludis
- Paraburkholderia aromaticivorans
- Paraburkholderia aspalathi
- Paraburkholderia azotifigens
- Paraburkholderia bannensis
- Paraburkholderia bryophila
- Paraburkholderia caballeronis
- Paraburkholderia caffeinilytica
- Paraburkholderia caledonica
- Paraburkholderia caribensis
- Paraburkholderia caryophylli
- Paraburkholderia denitrificans
- Paraburkholderia diazotrophica
- Paraburkholderia dilworthii
- Paraburkholderia dipogonis
- Paraburkholderia eburnea
- Paraburkholderia endofungorum
- Paraburkholderia ferrariae
- Paraburkholderia fungorum
- Paraburkholderia ginsengisoli
- Paraburkholderia ginsengiterrae
- Paraburkholderia graminis
- Paraburkholderia heleia
- Paraburkholderia hiiakae
- Paraburkholderia hospita
- Paraburkholderia humisilvae
- Paraburkholderia jirisanensis
- Paraburkholderia kirstenboschensis
- Paraburkholderia insulsa
- Paraburkholderia kururiensis
- Paraburkholderia megapolitana
- Paraburkholderia metalliresistens
- Paraburkholderia metrosideri
- Paraburkholderia mimosarum
- Paraburkholderia monticola
- Paraburkholderia nodosa
- Paraburkholderia oxyphila
- Paraburkholderia pallidirosea
- Paraburkholderia paradisi
- Paraburkholderia peleae
- Paraburkholderia phenazinium
- Paraburkholderia phenoliruptrix
- Paraburkholderia phymatum
- Paraburkholderia phytofirmans
- Paraburkholderia piptadeniae
- Paraburkholderia rhizosphaerae
- Paraburkholderia rhizoxinica
- Paraburkholderia rhynchosiae
- Paraburkholderia ribeironis
- Paraburkholderia sabiae
- Paraburkholderia sacchari
- Paraburkholderia sartisoli
- Paraburkholderia sediminicola
- Paraburkholderia silvatlantica
- Paraburkholderia soli
- Paraburkholderia solisilvae
- Paraburkholderia sprentiae
- Paraburkholderia susongensis
- Paraburkholderia symbiotica
- Paraburkholderia terrae
- Paraburkholderia terricola
- Paraburkholderia tropica
- Paraburkholderia tuberum
- Paraburkholderia unamae
- Paraburkholderia xenovorans
References
- ^ a b c d e "Molecular signatures and phylogenomic analysis of the genus Burkholderia: Proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species". Front Genet. 5: 429. 2014. doi:10.3389/fgene.2014.00429. PMC 4271702. PMID 25566316.
{{cite journal}}: Cite uses deprecated parameter|authors=(help)CS1 maint: unflagged free DOI (link) - ^ a b Gupta RS. (2016). "Impact of genomics on the understanding of microbial evolution and classification: The importance of Darwin's views on classification". FEMS Microbiol Rev. 40 (4): 520–53. doi:10.1093/femsre/fuw011. PMID 27279642.
- ^ Estrada-De Los Santos, P.; Vinuesa, P.; Martínez-Aguilar, L.; Hirsch, A. M.; Caballero-Mellado, J. S. (2013). "Phylogenetic Analysis of Burkholderia Species by Multilocus Sequence Analysis". Current Microbiology. 67 (1): 51–60. doi:10.1007/s00284-013-0330-9. PMID 23404651.
- ^ "List of new names and new combinations previously effectively, but not validly, published". Int J Syst Evol Microbiol. 65: 2017–2025. 2015. doi:10.1099/ijs.0.000317.
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