RBM10

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RBM10
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases RBM10, DXS8237E, GPATC9, GPATCH9, S1-1, TARPS, ZRANB5, RNA binding motif protein 10
External IDs MGI: 2384310 HomoloGene: 31330 GeneCards: RBM10
Gene location (Human)
X chromosome (human)
Chr. X chromosome (human)[1]
X chromosome (human)
Genomic location for RBM10
Genomic location for RBM10
Band Xp11.3 Start 47,144,869 bp[1]
End 47,186,813 bp[1]
RNA expression pattern
PBB GE RBM10 215089 s at fs.png

PBB GE RBM10 208984 x at fs.png

PBB GE RBM10 217221 x at fs.png
More reference expression data
Orthologs
Species Human Mouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001204466
NM_001204467
NM_001204468
NM_005676
NM_152856

NM_001167775
NM_001167776
NM_145627

RefSeq (protein)

NP_001161247
NP_001161248
NP_663602

Location (UCSC) Chr X: 47.14 – 47.19 Mb Chr X: 20.62 – 20.65 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

RNA-binding protein 10 is a protein that in humans is encoded by the RBM10 gene.[5][6][7]

The protein encoded by this gene contains RNA recognition motif found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. In vitro studies showed that the rat homolog bound to RNA homopolymers, with a preference for G and U polyribonucleotides. This gene is part of a gene cluster located at Xp11.23 on X chromosome, and its 3' end lies within 20 kb upstream of UBE1. Two transcript variants encoding different isoforms have been identified for this gene.[7]

References[edit]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000182872 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000031060 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". 
  4. ^ "Mouse PubMed Reference:". 
  5. ^ Nagase T, Seki N, Tanaka A, Ishikawa K, Nomura N (Mar 1996). "Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1". DNA Res. 2 (4): 167–74, 199–210. doi:10.1093/dnares/2.4.167. PMID 8590280. 
  6. ^ Coleman MP, Ambrose HJ, Carrel L, Nemeth AH, Willard HF, Davies KE (Oct 1996). "A novel gene, DXS8237E, lies within 20 kb upstream of UBE1 in Xp11.23 and has a different X inactivation status". Genomics. 31 (1): 135–8. doi:10.1006/geno.1996.0022. PMID 8808293. 
  7. ^ a b "Entrez Gene: RBM10 RNA binding motif protein 10". 

Further reading[edit]