User:Luke Maurits/Books/Phylogenetics

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Overview: Phylogenetics; Phylogenetic comparative methods; Molecular phylogenetics; Computational phylogenetics; Cladistics
Basic Concepts: Phylogenetic tree; Clade; Cladogram; Phylogenetic network; Long branch attraction; Ghost lineage
Inference Methods: Substitution model; Maximum parsimony (phylogenetics); Maximum likelihood; Neighbor-joining; UPGMA; Bayesian inference in phylogeny; Least squares inference in phylogeny