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<!-- EDIT BELOW THIS LINE -->'''Tadashi Fukami''' is an associate Professor of Biology and community ecologist at [[Stanford University]].<ref name="auto">{{Cite web|title=Tadashi Fukami's Profile {{!}} Stanford Profiles|url=https://profiles.stanford.edu/tadashi-fukami?tab=bio|access-date=2020-12-18|website=profiles.stanford.edu|language=en}}</ref> He is currently the head of Fukami Lab which is a community ecology group at Stanford that focuses on "historical contingency in the assembly of ecological communities."<ref>{{Cite web|title=Research interests|url=https://web.stanford.edu/~fukamit/research.htm|access-date=2020-12-18|website=web.stanford.edu}}</ref>
<!-- EDIT BELOW THIS LINE -->'''Tadashi Fukami''' is an associate Professor of Biology and community ecologist at [[Stanford University]].<ref name="auto">{{Cite web|title=Tadashi Fukami's Profile {{!}} Stanford Profiles|url=https://profiles.stanford.edu/tadashi-fukami?tab=bio|access-date=2020-12-18|website=profiles.stanford.edu|language=en}}</ref> He is currently the head of Fukami Lab which is a [[Community (ecology)|community ecology]] research group that focuses on "historical contingency in the assembly of ecological communities."<ref>{{Cite web|title=Research interests|url=https://web.stanford.edu/~fukamit/research.htm|access-date=2020-12-18|website=web.stanford.edu}}</ref> Fukami is an elected Fellow of the [[Ecological Society of America]].<ref name=":1" />


== Early life & education ==
== Early life & education ==
In an interview with [[Oikos (journal)|Oikos Editorial Office]], Fukami explains that even though he grew up near [[Tokyo]], he would visit [[Wakayama Prefecture|Wakayama]] with his family for vacation several times a year, sparking his interest in nature.
In an interview with [[Oikos (journal)|Oikos Editorial Office]], Fukami explains that even though he grew up near [[Tokyo]], he would visit [[Wakayama Prefecture|Wakayama]] with his family for vacation several times a year, sparking his interest in nature.<ref name=":0" />


Fukami received his Bachelor's degree from [[Waseda University]] in 1996, his Master's degree at the [[University of Tokyo]] in 1998, and his Ph.D. in ecology and evolutionary biology at the [[University of Tennessee]], [[Knoxville, Tennessee|Knoxville]], in 2003.<ref name=":0">{{Cite web|title=Welcome Tadashi Fukami, new SE|url=http://www.oikosjournal.org/blog/welcome-tadashi-fukami-new-se|access-date=2020-12-18|website=www.oikosjournal.org|language=en}}</ref>
Fukami received his Bachelor's degree from [[Waseda University]] in 1996, his Master's degree at the [[University of Tokyo]] in 1998, and his Ph.D. in ecology and evolutionary biology at the [[University of Tennessee]], [[Knoxville, Tennessee|Knoxville]], in 2003.<ref name=":0">{{Cite web|title=Welcome Tadashi Fukami, new SE|url=http://www.oikosjournal.org/blog/welcome-tadashi-fukami-new-se|access-date=2020-12-18|website=www.oikosjournal.org|language=en}}</ref>
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Fukami was a postdoctoral fellow at [[Landcare Research]] in [[New Zealand]] from 2003-2005. He then went on to be an assistant professor at the [[University of Hawaiʻi at Mānoa|University of Hawaii at Manoa]] from 2006-2008. He has now been at Stanford University since 2008.<ref name=":0" />
Fukami was a postdoctoral fellow at [[Landcare Research]] in [[New Zealand]] from 2003-2005. He then went on to be an assistant professor at the [[University of Hawaiʻi at Mānoa|University of Hawaii at Manoa]] from 2006-2008. He has now been at Stanford University since 2008.<ref name=":0" />


== Recent publications ==
== Notable publications ==
Fukami currently has 97 publications.<ref>{{Cite web|title=Tadashi Fukami's Profile {{!}} Stanford Profiles|url=https://profiles.stanford.edu/tadashi-fukami?tab=publications|access-date=2020-12-18|website=profiles.stanford.edu|language=en}}</ref>
Fukami's research on community ecology, community assembly, alternate stable states and historical contingency has been published in multiple academic journals. Below, some of his most-cited papers are listed.<ref>{{Cite web|title=Tadashi Fukami's Profile {{!}} Stanford Profiles|url=https://profiles.stanford.edu/tadashi-fukami?tab=publications|access-date=2020-12-18|website=profiles.stanford.edu|language=en}}</ref>


=== 2021 ===
=== Selected publications ===


* McFall-Ngai, M., Hadfield, M.G., Bosch, T.C., Carey, H.V., Domazet-Lošo, T., Douglas, A.E., Dubilier, N., Eberl, G., Fukami, T., Gilbert, S.F. and Hentschel, U., 2013. Animals in a bacterial world, a new imperative for the life sciences. ''Proceedings of the National Academy of Sciences'', 110(9), pp.3229-3236.<ref>{{Cite journal|last=McFall-Ngai|first=Margaret|last2=Hadfield|first2=Michael G.|last3=Bosch|first3=Thomas C. G.|last4=Carey|first4=Hannah V.|last5=Domazet-Lošo|first5=Tomislav|last6=Douglas|first6=Angela E.|last7=Dubilier|first7=Nicole|last8=Eberl|first8=Gerard|last9=Fukami|first9=Tadashi|last10=Gilbert|first10=Scott F.|last11=Hentschel|first11=Ute|date=2013-02-26|title=Animals in a bacterial world, a new imperative for the life sciences|url=https://www.pnas.org/content/110/9/3229|journal=Proceedings of the National Academy of Sciences|language=en|volume=110|issue=9|pages=3229–3236|doi=10.1073/pnas.1218525110|issn=0027-8424|pmid=23391737}}</ref>
* Jacquemyn H, Pozo MI, Álvarez-Pérez S, Lievens B, and Fukami T (2021) Yeast-nectar interactions: metacommunities and effects on pollinators. Current Opinion in Insect Science 44: 35-40.
* Nemergut, D.R., Schmidt, S.K., Fukami, T., O'Neill, S.P., Bilinski, T.M., Stanish, L.F., Knelman, J.E., Darcy, J.L., Lynch, R.C., Wickey, P. and Ferrenberg, S., 2013. Patterns and processes of microbial community assembly. ''Microbiology and Molecular Biology Reviews'', 77(3), pp.342-356.<ref>{{Cite journal|last=Nemergut|first=Diana R.|last2=Schmidt|first2=Steven K.|last3=Fukami|first3=Tadashi|last4=O'Neill|first4=Sean P.|last5=Bilinski|first5=Teresa M.|last6=Stanish|first6=Lee F.|last7=Knelman|first7=Joseph E.|last8=Darcy|first8=John L.|last9=Lynch|first9=Ryan C.|last10=Wickey|first10=Phillip|last11=Ferrenberg|first11=Scott|date=2013-09-01|title=Patterns and Processes of Microbial Community Assembly|url=https://mmbr.asm.org/content/77/3/342|journal=Microbiology and Molecular Biology Reviews|language=en|volume=77|issue=3|pages=342–356|doi=10.1128/MMBR.00051-12|issn=1092-2172|pmid=24006468}}</ref>

* Fukami, T., 2015. Historical contingency in community assembly: integrating niches, species pools, and priority effects. ''Annual Review of Ecology, Evolution, and Systematics'', 46, pp.1-23.<ref>{{Cite journal|last=Fukami|first=Tadashi|date=2015-12-04|title=Historical Contingency in Community Assembly: Integrating Niches, Species Pools, and Priority Effects|url=http://www.annualreviews.org/doi/10.1146/annurev-ecolsys-110411-160340|journal=Annual Review of Ecology, Evolution, and Systematics|language=en|volume=46|issue=1|pages=1–23|doi=10.1146/annurev-ecolsys-110411-160340|issn=1543-592X}}</ref>
=== 2020 ===
* Fukami, T., Martijn Bezemer, T., Mortimer, S.R. and van der Putten, W.H., 2005. Species divergence and trait convergence in experimental plant community assembly. ''Ecology letters'', 8(12), pp.1283-1290.<ref>{{Cite journal|last=Fukami|first=Tadashi|last2=Bezemer|first2=T. Martijn|last3=Mortimer|first3=Simon R.|last4=Putten|first4=Wim H. van der|date=2005|title=Species divergence and trait convergence in experimental plant community assembly|url=https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1461-0248.2005.00829.x|journal=Ecology Letters|language=en|volume=8|issue=12|pages=1283–1290|doi=10.1111/j.1461-0248.2005.00829.x|issn=1461-0248}}</ref>

* Fukami, T., Dickie, I.A., Paula Wilkie, J., Paulus, B.C., Park, D., Roberts, A., Buchanan, P.K. and Allen, R.B., 2010. Assembly history dictates ecosystem functioning: evidence from wood decomposer communities. ''Ecology letters'', 13(6), pp.675-684.<ref>{{Cite journal|last=Fukami|first=Tadashi|last2=Dickie|first2=Ian A.|last3=Wilkie|first3=J. Paula|last4=Paulus|first4=Barbara C.|last5=Park|first5=Duckchul|last6=Roberts|first6=Andrea|last7=Buchanan|first7=Peter K.|last8=Allen|first8=Robert B.|date=2010|title=Assembly history dictates ecosystem functioning: evidence from wood decomposer communities|url=https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1461-0248.2010.01465.x|journal=Ecology Letters|language=en|volume=13|issue=6|pages=675–684|doi=10.1111/j.1461-0248.2010.01465.x|issn=1461-0248}}</ref>
* Hendershot JN, Smith JR, Anderson CB, Letten AD, Frishkoff LO, Zook JR, Fukami T, and Daily GC (2020) Intensive farming drives long-term shifts in avian community composition. Nature 579: 393-396.
* Fukami, T. and Wardle, D.A., 2005. Long-term ecological dynamics: reciprocal insights from natural and anthropogenic gradients. ''Proceedings of the Royal Society B: Biological Sciences'', 272(1577), pp.2105-2115.<ref>{{Cite journal|last=Fukami|first=Tadashi|last2=Wardle|first2=David A|date=2005-10-22|title=Long-term ecological dynamics: reciprocal insights from natural and anthropogenic gradients|url=https://royalsocietypublishing.org/doi/full/10.1098/rspb.2005.3277|journal=Proceedings of the Royal Society B: Biological Sciences|volume=272|issue=1577|pages=2105–2115|doi=10.1098/rspb.2005.3277|pmc=PMC1559953|pmid=16191623}}</ref>
* San Juan PA, Hendershot JN, Daily GC, and Fukami T (2020) Land-use change has host-specific influences on avian gut microbiomes. ISME Journal 14: 318-321.
* Tsuji K and Fukami T (2020) Sexual dimorphism and species diversity: from clades to sites. Trends in Ecology & Evolution 35: 105-114.

=== 2019 ===

* Álvarez-Pérez S, Lievens B, and Fukami T (2019) Yeast–bacterium interactions: the next frontier in nectar research. Trends in Plant Science 24: 393-401.
* Fung C, Tan S, Nakajima M, Skoog EC, Camarillo-Guerrero LS, Klein JA, Lawley TD, Solnick JV, Fukami T, and Amieva MR (2019) High resolution mapping reveals that microniches in the gastric glands control Helicobacter pylori colonization of the stomach. PLOS Biology 17: e3000231.
* Grainger TN, Letten AD, Gilbert B, and Fukami T (2019) Applying modern coexistence theory to priority effects. Proceedings of the National Academy of Sciences of the United States of America 116: 6205-6210.

=== 2018 ===

* Chappell CR and Fukami T (2018) Nectar yeasts: a natural microcosm for ecology. Yeast 35: 417-423.
* Dhami MK, Hartwig T, Letten AD, Banf M, and Fukami T (2018) Genomic diversity of a nectar yeast clusters into metabolically, but not geographically, distinct lineages. Molecular Ecology 27: 2067-2076.
* Fukami T (2018) Messy communities: the arising researcher. Bulletin of the Ecological Society of America 99: 58-59.
* Letten AD, Dhami MK, Ke PJ, and Fukami T (2018) Species coexistence through simultaneous fluctuation-dependent mechanisms. Proceedings of the National Academy of Sciences of the United States of America 115: 6745-6750.
* Madden AA, Epps MJ, Fukami T, Irwin RE, Sheppard J, Sorger DM, and Dunn RR (2018) The ecology of insect-yeast relationships and its relevance to human industry. Proceedings of the Royal Society B: Biological Sciences 285: 20172733.
* Sprockett D, Fukami T, and Relman DA (2018) Role of priority effects in the early-life assembly of the gut microbiota. Nature Reviews Gastroenterology & Hepatology 15: 197-205.
* Toju H, Vannette RL, Gauthier MPL, Dhami MK, and Fukami T (2018) Priority effects can persist across floral generations in nectar microbial metacommunities. Oikos 127: 345-352.
* Tsuji K and Fukami T (2018) Community-wide consequences of sexual dimorphism: evidence from nectar microbes in dioecious plants. Ecology 99: 2476-2484.
* Vannette RL and Fukami T (2018) Contrasting effects of yeasts and bacteria on floral nectar traits. Annals of Botany 121: 1343-1349.
* Wilson Rankin EE, Knowlton JL, Gruner DS, Flaspohler DJ, Giardina CP, Leopold DR, Buckardt A, Pitt WC, and Fukami T (2018) Vertical foraging shifts in Hawaiian forest birds in response to invasive rat removal. PLOS ONE 13: e0202869.
* Wittmann MJ and Fukami T (2018) Eco-evolutionary buffering: rapid evolution facilitates regional species coexistence despite local priority effects. American Naturalist 191: E171-E184.
* Zee PC and Fukami T (2018) Priority effects are weakened by a short, but not long, history of sympatric evolution. Proceedings of the Royal Society B: Biological Sciences 285: 20171722.


== Honors & awards ==
== Honors & awards ==
Awards include:<ref name="auto"/>
Awards include:<ref name="auto"/>
* Fellow, [[Ecological Society of America]] (2019)<ref>{{Cite web|title=ESA Fellows – The Ecological Society of America|url=https://www.esa.org/programs/fellows-program/esa-fellows/|access-date=2020-12-18|language=en-US}}</ref>
* Fellow, [[Ecological Society of America]] (2019)<ref name=":1">{{Cite web|title=ESA Fellows – The Ecological Society of America|url=https://www.esa.org/programs/fellows-program/esa-fellows/|access-date=2020-12-18|language=en-US}}</ref>
* Presidential Award, [[American Society of Naturalists]] (2019)<ref>{{Cite web|title=Awards|url=https://www.amnat.org/awards.html#President|access-date=2020-12-18|website=www.amnat.org|language=en}}</ref>
* Presidential Award, [[American Society of Naturalists]] (2019)<ref>{{Cite web|title=Awards|url=https://www.amnat.org/awards.html#President|access-date=2020-12-18|website=www.amnat.org|language=en}}</ref>
* Outstanding Ecological Theory Paper Award, Ecological Society of America Theoretical Ecology Section (2017)
* Outstanding Ecological Theory Paper Award, Ecological Society of America Theoretical Ecology Section (2017)

Revision as of 15:38, 9 January 2021

Tadashi Fukami is an associate Professor of Biology and community ecologist at Stanford University.[1] He is currently the head of Fukami Lab which is a community ecology research group that focuses on "historical contingency in the assembly of ecological communities."[2] Fukami is an elected Fellow of the Ecological Society of America.[3]

Early life & education

In an interview with Oikos Editorial Office, Fukami explains that even though he grew up near Tokyo, he would visit Wakayama with his family for vacation several times a year, sparking his interest in nature.[4]

Fukami received his Bachelor's degree from Waseda University in 1996, his Master's degree at the University of Tokyo in 1998, and his Ph.D. in ecology and evolutionary biology at the University of Tennessee, Knoxville, in 2003.[4]

Career & research

Fukami was a postdoctoral fellow at Landcare Research in New Zealand from 2003-2005. He then went on to be an assistant professor at the University of Hawaii at Manoa from 2006-2008. He has now been at Stanford University since 2008.[4]

Notable publications

Fukami's research on community ecology, community assembly, alternate stable states and historical contingency has been published in multiple academic journals. Below, some of his most-cited papers are listed.[5]

Selected publications

  • McFall-Ngai, M., Hadfield, M.G., Bosch, T.C., Carey, H.V., Domazet-Lošo, T., Douglas, A.E., Dubilier, N., Eberl, G., Fukami, T., Gilbert, S.F. and Hentschel, U., 2013. Animals in a bacterial world, a new imperative for the life sciences. Proceedings of the National Academy of Sciences, 110(9), pp.3229-3236.[6]
  • Nemergut, D.R., Schmidt, S.K., Fukami, T., O'Neill, S.P., Bilinski, T.M., Stanish, L.F., Knelman, J.E., Darcy, J.L., Lynch, R.C., Wickey, P. and Ferrenberg, S., 2013. Patterns and processes of microbial community assembly. Microbiology and Molecular Biology Reviews, 77(3), pp.342-356.[7]
  • Fukami, T., 2015. Historical contingency in community assembly: integrating niches, species pools, and priority effects. Annual Review of Ecology, Evolution, and Systematics, 46, pp.1-23.[8]
  • Fukami, T., Martijn Bezemer, T., Mortimer, S.R. and van der Putten, W.H., 2005. Species divergence and trait convergence in experimental plant community assembly. Ecology letters, 8(12), pp.1283-1290.[9]
  • Fukami, T., Dickie, I.A., Paula Wilkie, J., Paulus, B.C., Park, D., Roberts, A., Buchanan, P.K. and Allen, R.B., 2010. Assembly history dictates ecosystem functioning: evidence from wood decomposer communities. Ecology letters, 13(6), pp.675-684.[10]
  • Fukami, T. and Wardle, D.A., 2005. Long-term ecological dynamics: reciprocal insights from natural and anthropogenic gradients. Proceedings of the Royal Society B: Biological Sciences, 272(1577), pp.2105-2115.[11]

Honors & awards

Awards include:[1]

  • Fellow, Ecological Society of America (2019)[3]
  • Presidential Award, American Society of Naturalists (2019)[12]
  • Outstanding Ecological Theory Paper Award, Ecological Society of America Theoretical Ecology Section (2017)
  • Dean’s Award for Distinguished Teaching, School of Humanities and Sciences, Stanford University (2015)
  • Science prize for inquiry-based instruction, Science magazine, AAAS (2013)
  • CAREER award, National Science Foundation (2012)
  • Denzaburo Miyadi Award, Ecological Society of Japan (2005)

References

  1. ^ a b "Tadashi Fukami's Profile | Stanford Profiles". profiles.stanford.edu. Retrieved 2020-12-18.
  2. ^ "Research interests". web.stanford.edu. Retrieved 2020-12-18.
  3. ^ a b "ESA Fellows – The Ecological Society of America". Retrieved 2020-12-18.
  4. ^ a b c "Welcome Tadashi Fukami, new SE". www.oikosjournal.org. Retrieved 2020-12-18.
  5. ^ "Tadashi Fukami's Profile | Stanford Profiles". profiles.stanford.edu. Retrieved 2020-12-18.
  6. ^ McFall-Ngai, Margaret; Hadfield, Michael G.; Bosch, Thomas C. G.; Carey, Hannah V.; Domazet-Lošo, Tomislav; Douglas, Angela E.; Dubilier, Nicole; Eberl, Gerard; Fukami, Tadashi; Gilbert, Scott F.; Hentschel, Ute (2013-02-26). "Animals in a bacterial world, a new imperative for the life sciences". Proceedings of the National Academy of Sciences. 110 (9): 3229–3236. doi:10.1073/pnas.1218525110. ISSN 0027-8424. PMID 23391737.
  7. ^ Nemergut, Diana R.; Schmidt, Steven K.; Fukami, Tadashi; O'Neill, Sean P.; Bilinski, Teresa M.; Stanish, Lee F.; Knelman, Joseph E.; Darcy, John L.; Lynch, Ryan C.; Wickey, Phillip; Ferrenberg, Scott (2013-09-01). "Patterns and Processes of Microbial Community Assembly". Microbiology and Molecular Biology Reviews. 77 (3): 342–356. doi:10.1128/MMBR.00051-12. ISSN 1092-2172. PMID 24006468.
  8. ^ Fukami, Tadashi (2015-12-04). "Historical Contingency in Community Assembly: Integrating Niches, Species Pools, and Priority Effects". Annual Review of Ecology, Evolution, and Systematics. 46 (1): 1–23. doi:10.1146/annurev-ecolsys-110411-160340. ISSN 1543-592X.
  9. ^ Fukami, Tadashi; Bezemer, T. Martijn; Mortimer, Simon R.; Putten, Wim H. van der (2005). "Species divergence and trait convergence in experimental plant community assembly". Ecology Letters. 8 (12): 1283–1290. doi:10.1111/j.1461-0248.2005.00829.x. ISSN 1461-0248.
  10. ^ Fukami, Tadashi; Dickie, Ian A.; Wilkie, J. Paula; Paulus, Barbara C.; Park, Duckchul; Roberts, Andrea; Buchanan, Peter K.; Allen, Robert B. (2010). "Assembly history dictates ecosystem functioning: evidence from wood decomposer communities". Ecology Letters. 13 (6): 675–684. doi:10.1111/j.1461-0248.2010.01465.x. ISSN 1461-0248.
  11. ^ Fukami, Tadashi; Wardle, David A (2005-10-22). "Long-term ecological dynamics: reciprocal insights from natural and anthropogenic gradients". Proceedings of the Royal Society B: Biological Sciences. 272 (1577): 2105–2115. doi:10.1098/rspb.2005.3277. PMC 1559953. PMID 16191623.{{cite journal}}: CS1 maint: PMC format (link)
  12. ^ "Awards". www.amnat.org. Retrieved 2020-12-18.


Category:Ecologists Category:Stanford University Department of Biology faculty Category:University of Tennessee alumni Category:University of Tokyo alumni Category:Waseda University alumni


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