Chlorobi-1 RNA motif
 |
| Chlorobi-1 RNA | |
|---|---|
 Consensus secondary structure of Chlorobi-1 RNAs | |
| Identifiers | |
| Symbol | Chlorobi-1 |
| Rfam | RF01696 |
| Other data | |
| RNA type | sRNA |
| PDB structures | PDBe |
The Chlorobi-1 RNA motif is a conserved RNA secondary structure identified by bioinformatics.[1] It is predicted to be used only by Chlorobiota (formerly Chlorobi), a phylum of bacteria. The motif consists of two stem-loops that are followed by an apparent rho-independent transcription terminator. The motif is presumed to function as an independently transcribed non-coding RNA.
A number of other RNAs were identified in the same study, including:[1]
- Bacteroidales-1 RNA motif
- CrcB RNA Motif
- Gut-1 RNA motif
- JUMPstart RNA motif
- Lactis-plasmid RNA motif
- Lacto-usp RNA motif
- MraW RNA motif
- Ocean-V RNA motif
- PsaA RNA motif
- Pseudomon-Rho RNA motif
- Rne-II RNA motif
References
[edit]- ^ a b Weinberg Z, Wang JX, Bogue J, et al. (March 2010). "Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea and their metagenomes". Genome Biol. 11 (3): R31. doi:10.1186/gb-2010-11-3-r31. PMC 2864571. PMID 20230605.
External links
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