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https://phys.org/news/2016-11-biologists-speciation-laboratory-flask.html


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To Do:

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    • Analysis of stickleback genome. (here and here)
    • Add Cichlid fish to speciation section. Look up information and check personal library. See here.
    • 1989 study on mammal body size changes over past 200 years and add to article. See here, here, here, and here.
    • Butterfly study
    • Sticklebacks (sources in testing page from iBooks)
    • Grant's finches (book & papers from iBooks)
    • gall wasps (where is this research? iBooks?)
    • phytophagpus insects (iBooks)
    • Coyne's work (speciation book and iBook papers),
    • Endler's Natural Selection in the Wild book
    • ipomopsis hybrid speciation (iBooks)
    • TTX resistance
    • Flu evolution (http://evolution.berkeley.edu/evolibrary/news/130201_flu) in selection section
    • New Approaches to Speciation in the Fossil Record table 1.1 (see photos with screenshots)
    • Philip Gingerich - table 1 (see photos with screenshots) Speciation in the fossil record
    • work on species concepts in species

Other


Evidence of common descent

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vestigial structures

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to research

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  • Huxleys reptile to bird transition prediction

Biogeography section

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Palentology section of EoCD

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[8] <<< This source discusses the quality of the fossil record using 1000 morphological molecular cladograms. This study should be placed in Evidence from Paleontology section of EoCD. Section needs huge overhaul with better sources and a broad range of past and current research.

[9] <<< This source discuses the molecular clock in relation to the fossil record. Both calibration and method are discussed. This is to be used in the main Paleo section of EoCD.

[10] <<< This source discuses similar information as the citation above.

[11] <<< This source discusses an example of evolution documented in the fossil record.

Evidence from selection

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Galápagos finches

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Bear predation of Sockeye salmon

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Evidence from speciation

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Fossil section

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Plant section

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Intro in EoCD$sp.$plants

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Serpentine soils

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Howea palms

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examples (all from Plant Speciation - Rise of the Poor Cousins) (all found in iBooks)

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Vertebrate section

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[28] <<< This citation discuses evidence for hybridization in a marine mammal. This can relate to the plant speciation section with extension to animals.

Invertebrate section

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Ecological/Parallel speciation

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[29] <<< This source discuses parallel speciation and should be included in the main article on on PSp.

[30] <<< Used in article about the debate over definition. This source should still be used to expand the article. It's full of examples and research concerning speciation. Can, and should, be used in speciation article.

[31] <<< speciation in a diverse group of land snails, genus Rhagada

[32] <<< quantification of ecological divergence for >500 species pairs from eight plant, invertebrate, and vertebrate taxa and statistically isolate its association with reproductive isolation. This approach demonstrates a highly consistent and significant positive association between ecological divergence and reproductive isolation across taxa. This relationship was also observed across different aspects of ecological divergence and components of reproductive isolation. These findings are highly consistent with the hypothesis that ecological adaptation plays a fundamental and taxonomically general role in promoting reproductive isolation and speciation.

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Also 4 case studies and mathematical models (pdf's in iBooks).

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[36] <<< This example has additional papers listed above in plant sub-section of EoCD$speciation section

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Phytophagous insects

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Sticklebacks

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Walking stick insects

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Marine snail

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Information concerning this example can be found in Coyne lecture (iTunes U), Parallel speciation: a key to sympatric divergence by Kerstin Johannesson, and

White Sands lizards

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[47] <<<This source should discuss the parallel sp. aspect of the lizards in PSp and add an additional study in EoCD$Selection section concerning white sands lizards


References

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  1. ^ Hvala, John A.; Wood, Troy E. (2012). "Speciation: Introduction". eLS. Chichester: John Wiley & Sons Ltd. doi:10.1002/9780470015902.a0001709.pub3.
  2. ^ Howard, Daniel J. (2003). "Speciation: Allopatric". eLS. Chichester: John Wiley & Sons Ltd. doi:10.1038/npg.els.0001748.
  3. ^ B. Jesse Shapiro, Jean-Babtiste Leducq, and James Mallet (2016), "What Is Speciation?", PLoS Genetics, 12 (3), doi:10.1371/journal.pgen.1005860{{citation}}: CS1 maint: multiple names: authors list (link) CS1 maint: unflagged free DOI (link)
  4. ^ The Marie Curie SPECIATION Network (2012), "What do we need to know about speciation?", Trends in Ecology & Evolution, 27 (1): 27–39, doi:10.1016/j.tree.2011.09.002
  5. ^ Sergey Gavrilets (2003), "Perspective: Models of speciation: What have we learned in 40 years?", Evolution, 57 (10): 2197–2215, doi:10.1554/02-727
  6. ^ {{citation}}: Empty citation (help)
  7. ^ {{citation}}: Empty citation (help)
  8. ^ Michael J. Benton; et al. (2000), "Quality of the Fossil Record Through Time", Nature, 403: 534–537 {{citation}}: Explicit use of et al. in: |author= (help)
  9. ^ Michael J. Benton and Philip C. J. Donoghue (2007), "Rocks and Clocks: Calibrating the Tree of Life Using Fossils and Molecules", Trends in Ecology and Evolution, 22 (8): 424–431
  10. ^ Philip C. J. Donoghue and Michael J. Benton (2008), "Paleontological Evidence to Date the Tree of Life", Mol. Biol. Evol, 24 (1): 26–53
  11. ^ Satisfied Chiba (1996), "A 40,000 year record of discontinuous evolution of islands snails", Paleobiology, 22 (2): 177–188
  12. ^ Stephanie M. Carlson (2009), "Does Variation in Selection Imposed by Bears Drive Divergence among Populations in the Size and Shape of Sockeye Salmon?", Evolution, 63 (5): 1244–1261
  13. ^ Curry J. Cunningham; et al. (2013), "Size Selectivity of Predation by Brown Bears Depends on the Density of Their Sockeye Salmon Prey", The American Naturalist, 181 (5): 663–673 {{citation}}: Explicit use of et al. in: |author= (help)
  14. ^ Thomas P. Quinn and Michael T. Kinnison (1999), "Size-selective and sex-selective predation by brown bears on sockeye salmon", Oecologia, 121: 273–282
  15. ^ Matthew J. Hegarty and Simon J. Hiscock (2005), "Hybrid Speciation in Plants: New Insights from Molecular Studies", New Phytologist, 165: 411–423
  16. ^ Harrison, Susan; Rajakaruna, Nishanta (2011), "Plant Speciation", Serpentine: The Evolution and Ecology of a Model System, University of California Press, ISBN 9780520268357
  17. ^ Sergey Gavrilets and Aaron Vose (2007), "Case Studies and Mathematical Models of Ecological Speciation. 2. Palms on an Oceanic Island", Molecular Ecology, 16: 2910–2921
  18. ^ {{citation}}: Empty citation (help)
  19. ^ {{citation}}: Empty citation (help)
  20. ^ Susan Kephart and Kathryn Theiss (2004), "Pollinator-mediated isolation in sympatric milkweeds (Asclepias): do floral morphology and insect behavior influence species boundaries?", New Phytologist, 161: 265–277
  21. ^ Scott A. Hodges; et al. (2004), "Verne Grant and evolutionary studies of Aquilegia", New Phytologist, 161: 113–120 {{citation}}: Explicit use of et al. in: |author= (help)
  22. ^ D. R. Campbell (2004), "Natural selection in Ipomopsis hybrid zones: implications for ecological speciation", New Phytologist, 2004: 83–90
  23. ^ Thomas B. Patterson and Thomas J. Givnish (2004), "Geographic Cohesion, Chromosomal Evolution, Parallel Adaptive Radiations, and Consequent Floral Adaptations in Calochortus (Calochortaceae): evidence from a cpDNA phylogeny", New Phytologist, 161: 253–264
  24. ^ H. Allen Orr (2001), "The genetics of species differences", Trends in Ecology and Evolution, 16: 343–350
  25. ^ Donald A. Levin (2004), "The ecological transition in speciation", New Phytologist, 161: 91–96
  26. ^ Rocío Pérez; et al. (2004), "Convergent evolution of flower polymorphism in Narcissus (Amaryllidaceae)", New Phytologist, 161: 235–252 {{citation}}: Explicit use of et al. in: |author= (help)
  27. ^ Gloria Matallana; et al. (2016), "Post-pollination barriers in an assemblage of Bromeliaceae in south-eastern Brazil", Botanical Journal of the Linnean Society, doi:10.1111/boj.12406 {{citation}}: Explicit use of et al. in: |author= (help)
  28. ^ Ana R. Amaral; et al. (2014), "Hybrid Speciation in a Marine Mammal: The Clymene Dolphin (Stenella clymene)", PLoS ONE, 9 (1), doi:10.1371/journal.pone.0083645 {{citation}}: Explicit use of et al. in: |author= (help)CS1 maint: unflagged free DOI (link)
  29. ^ Kerstin Johannesson (2001), "Parallel speciation: a key to sympatric divergence", Trends in Ecology and Evolution, 16 (3): 148–153
  30. ^ James M. Sobel; et al. (2009), "The Biology of Speciation", Evolution, 64 (2): 295–315 {{citation}}: Explicit use of et al. in: |author= (help)
  31. ^ Sean Stankowski (2013), "Ecological speciation in an island snail: evidence for the parallel evolution of a novel ecotype and maintenance by ecologically dependent postzygotic isolation", Molecular Ecology, 22: 2726–2741, doi:10.1111/mec.12287
  32. ^ Daniel J. Funk; et al. (2006), "Ecological divergence exhibits consistently positive associations with reproductive isolation across disparate taxa", PNAS, 103 (9): 3209–3213 {{citation}}: Explicit use of et al. in: |author= (help)
  33. ^ Donald A. Levin (2004), "The ecological transition in speciation", New Phytologist, 161: 91–96
  34. ^ D. R. Campbell (2004), "Natural selection in Ipomopsis hybrid zones: implications for ecological speciation", New Phytologist, 2004: 83–90
  35. ^ Sergey Gavrilets; et al. (2007), "Case Studies and Mathematical Models of Ecological Speciation. 1. Cichlids in a crater lake", Molecular Ecology, 16: 2893–2909 {{citation}}: Explicit use of et al. in: |author= (help)
  36. ^ Sergey Gavrilets and Aaron Vose (2007), "Case Studies and Mathematical Models of Ecological Speciation. 2. Palms on an Oceanic Island", Molecular Ecology, 16: 2910–2921
  37. ^ S. Sadedin; et al. (2009), "Case Studies and Mathematical Models of Ecological Speciation. 3. Ecotype formation in a Swedish snail", Molecular Ecology, 18: 4006–4023 {{citation}}: Explicit use of et al. in: |author= (help)
  38. ^ Edgar A. Duevez-Guzman (2009), "Case Studies and Mathematical Models of Ecological Speciation. 4. Hybrid speciation in butterflies in a jungle", Evolution, 63 (10): 2611–2626
  39. ^ Kei W. Matsubayashi; et al. (2009), "Ecological speciation in phytophagous insects", Entomologia Experimentalis et Applicata, 134: 1–27, doi:10.1111/j.1570-7458.2009.00916.x {{citation}}: Explicit use of et al. in: |author= (help)
  40. ^ Daniel Berner; et al. (2009), "Variable Progrss Towards Ecological Speciation in Parapatry: Stickleback Across Eight Lake-Stream Transitions", Evolution, 63 (7): 1740–1753 {{citation}}: Explicit use of et al. in: |author= (help)
  41. ^ Jeffrey S. McKinnon; et al. (2004), "Evidence for Ecology's Role in Speciation", Nature, 429: 294–298 {{citation}}: Explicit use of et al. in: |author= (help)
  42. ^ Eric B. Taylor & J. Donald McPhail (2000), "Historical Contingency and Ecological Determinism Interact to Prime Speciation in Sticklebacks, Gasterosteus", Proc. R. Soc. Lond. B, 267: 2375–2384
  43. ^ Howard D. Rundle; et al. (2000), "Natural Selection and Parallel Speciation in Sympatric Sticklebacks", Science, 287 (5451): 306–307 {{citation}}: Explicit use of et al. in: |author= (help)
  44. ^ Janette Wenrick Boughman; et al. (2005), "Parallel Evolution of Sexual Isolation in Sticklebacks", Evolution, 59 (2): 361–373 {{citation}}: Explicit use of et al. in: |author= (help)
  45. ^ Patrik Nosil; et al. (2007), "Heterogeneous Genomic Differentiation Between Walking-Stick Ecotypes: "Isolation by Adaptation" and Multiple Roles for Divergent Selection", Evolution, 62 (2): 316–336 {{citation}}: Explicit use of et al. in: |author= (help)
  46. ^ Roger K. Butlin; et al. (2008), "Sympatric, parapatric or allopatric: the most important way to classify speciation?", Phil. Trans. R. Soc. B, 363: 2997–3007 {{citation}}: Explicit use of et al. in: |author= (help)
  47. ^ Erica Bree Rosenblum & Luke J. Harmon (2010), ""Same Same but Different": Replicated Ecological Speciation at White Sands", Evolution, 65 (4): 946–960
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