The cladogram below follows the topology from a 2012 analysis of morphological traits by Christopher A. Brochu and Glenn W. Storrs. Many extinct species of Crocodylus might represent different genera. C. suchus was not included, because its morphological codings were identical to these of C. niloticus. However, the authors suggested that it could be explained by their specimen sampling, and considered the two species to be distinct.
^ abcBrochu, C. A.; Storrs, G. W. (2012). "A giant crocodile from the Plio-Pleistocene of Kenya, the phylogenetic relationships of Neogene African crocodylines, and the antiquity of Crocodylus in Africa". Journal of Vertebrate Paleontology32 (3): 587. doi:10.1080/02724634.2012.652324.edit
^McAliley, Willis, Ray, White, Brochu & Densmore (2006). Are crocodiles really monophyletic?—Evidence for subdivisions from sequence and morphological data. Molecular Phylogenetics and Evolution 39: 16-32.
^ abRobert W. Meredith, Evon R. Hekkala, George Amato and John Gatesy (2011). "A phylogenetic hypothesis for Crocodylus (Crocodylia) based on mitochondrial DNA: Evidence for a trans-Atlantic voyage from Africa to the New World". Molecular Phylogenetics and Evolution60: 183–191. doi:10.1016/j.ympev.2011.03.026.