1999–2000 Copa Presidente
| Tournament details | |
|---|---|
| Country |  El Salvador |
| Teams | 36 |
| Final positions | |
| Champions | Águila |
| Runner-up | Firpo |
The Copa Presidente 1999–2000 is the first staging of the Copa El Salvador football tournament.
Knockout stage
Qualified teams
The nine group winners and the three best runners-up from the group stage qualify for the final stage.
| Team | Qualification | Divisional team | Zone |
|---|---|---|---|
| Atletico Balboa | Group Winner | Liga de Ascenso | Zona Oriental |
| Mar y Plata | Group Winner | Divisional team | Zona Oriental |
| C.D. Dragon | Group Winner | Divisional team | Zona Oriental |
| C.D. Aguila | Best second place team | Liga Mayor | Zona Oriental |
| C.D. Luis Angel Firpo | Group winner | Liga Mayor | Zona Central |
| San Luis | Group Winner | Divisional team | Zona Central |
| Atletico Marte | Group Winner | Divisional team | Zona Central |
| C.D. Chalatenango | Best second place team | Divisional team | Zona Central |
| ADET | Group winner | Divisional team | Zona Occidental |
| C.D. FAS | Group winner | Liga Mayor | Zona Occidental |
| A.D. Isidro Metapan | Group winner | Divisional team | Zona Occidental |
| Once Lobos | best second-place winner | Divisional team | Zona Occidental |
Semi Final teams
The three group winners and the best runners-up from the Quarterfinals group stage qualify for the semi final [1].
| Team | Qualification | Divisional team | Zone |
|---|---|---|---|
| Atletico Balboa | Group Winner | Liga de Ascenso | Zona Oriental |
| C.D. Aguila | Best second place team | Liga Mayor | Zona Oriental |
| C.D. Luis Angel Firpo | Group winner | Liga Mayor | Zona Central |
| C.D. FAS | Group winner | Liga Mayor | Zona Occidental |