Halopiger

Halopiger
Scientific classification
Domain:	Archaea
Kingdom:	Euryarchaeota
Phylum:	Euryarchaeota
Class:	Halobacteria
Order:	Natrialbales
Family:	Natrialbaceae
Genus:	Halopiger; Gutiérrez et al., 2007
Type species
	Halopiger xanaduensis; Gutérrez et al. 2007
Species
	H. aswanensis; H. djelfimassiliensis; H. goleimassiliensis; H. thermotolerans; H. xanaduensis;

Halopiger is a genus of archaeans in the family Natrialbaceae^[1] that have high tolerance to salinity.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[2] and National Center for Biotechnology Information (NCBI).^[1]

16S rRNA based LTP_06_2022^[3]^[4]^[5]

53 marker proteins based GTDB 08-RS214^[6]^[7]^[8]

Halopiger

H. goleimassiliensis Hassani et al. 2016

H. salifodinae Zhang et al. 2013

H. djelfimassiliensis Hassani et al. 2016

H. xanaduensis Gutierrez et al. 2007^[9]

	H. aswanensis Hezayen et al. 2010^[10]

	H. thermotolerans Minegishi et al. 2016^[11]

Halopiger

H. goleimassiliensis

	H. aswanensis

	H. xanaduensis

Halopiger djelfimassiliensis

	Natronobacterium

	Halobiforma

Species formerly placed in this taxon

Halopiger salifodinae,^[12] now Natrinema salifodinae

References

^ ^a ^b Sayers; et al. "Halopiger". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-06-05.
^ J.P. Euzéby. "Halopiger". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17.
^ "The LTP". Retrieved 10 May 2023.
^ "LTP_all tree in newick format". Retrieved 10 May 2023.
^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
^ Gutierrez, M. C.; Castillo, A. M.; Kamekura, M.; Xue, Y.; Ma, Y.; Cowan, D. A.; Jones, B. E.; Grant, W. D.; Ventosa, A. (2007). "Halopiger xanaduensis gen. nov., sp. nov., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China". International Journal of Systematic and Evolutionary Microbiology. 57 (7): 1402–1407. doi:10.1099/ijs.0.65001-0. ISSN 1466-5026. PMID 17625165.
^ Hezayen, F. F.; Gutierrez, M. C.; Steinbüchel, A.; Tindall, B. J.; Rehm, B. H. A. (2009). "Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil". International Journal of Systematic and Evolutionary Microbiology. 60 (3): 633–637. doi:10.1099/ijs.0.013078-0. ISSN 1466-5026. PMID 19654343.
^ Minegishi, Hiroaki; Shimogaki, Ryuta; Enomoto, Shigeaki; Echigo, Akinobu; Kondo, Yusuke; Nagaoka, Shuhei; Shimane, Yasuhiro; Kamekura, Masahiro; Itoh, Takashi; Ohkuma, Moriya; Nunoura, Takuro; Takai, Ken; Usami, Ron (2016). "Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt". International Journal of Systematic and Evolutionary Microbiology. 66 (12): 4975–4980. doi:10.1099/ijsem.0.001455. ISSN 1466-5026. PMID 27562780.
^ Zhang, W.-Y.; Meng, Y.; Zhu, X.-F.; Wu, M. (2013). "Halopiger salifodinae sp. nov., an extremely halophilic archaeon isolated from a salt mine". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt 10): 3563–3567. doi:10.1099/ijs.0.050971-0. ISSN 1466-5026. PMID 23563233.

Ikram, HI; Catherine, R; Caroline, M; Didier, R; Hocine, H; Christelle, D (15 June 2014). "Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp. nov". Standards in Genomic Sciences. 9 (3): 956–9. doi:10.4056/sigs.4618288. PMC 4149028. PMID 25197441.
Gutiérrez MC, Castillo AM, Kamekura M, Xue Y, Ma Y, Cowan DA, Jones BE, Grant WD, Ventosa A (2007). "Halopiger xanaduensis gen. nov., sp., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China". Int. J. Syst. Evol. Microbiol. 57 (Pt 7): 1402–1407. doi:10.1099/ijs.0.65001-0. PMID 17625165.
Oren A, Ventosa A (2000). "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. doi:10.1099/00207713-50-3-1405. PMID 10843089.
Hezayen, F.F.; Gutiérrez, M.C.; Steinbüchel, A.; Tindall, B.J.; Rehm, B.H.A. (2010). "Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil" (PDF). Int. J. Syst. Evol. Microbiol. 60 (3): 633–637. doi:10.1099/ijs.0.013078-0. PMID 19654343.

Scientific books

Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". In RE Buchanan; NE Gibbons (eds.). Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.

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[NCBI-1] Sayers; et al. "Halopiger". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-06-05.

[LPSN-2] J.P. Euzéby. "Halopiger". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17.

[3] "The LTP". Retrieved 10 May 2023.

[4] "LTP_all tree in newick format". Retrieved 10 May 2023.

[5] "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.

[about-6] "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.

[tree-7] "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.

[taxon_history-8] "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

[Gutierrez2007-9] Gutierrez, M. C.; Castillo, A. M.; Kamekura, M.; Xue, Y.; Ma, Y.; Cowan, D. A.; Jones, B. E.; Grant, W. D.; Ventosa, A. (2007). "Halopiger xanaduensis gen. nov., sp. nov., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China". International Journal of Systematic and Evolutionary Microbiology. 57 (7): 1402–1407. doi:10.1099/ijs.0.65001-0. ISSN 1466-5026. PMID 17625165.

[Hezayen2009-10] Hezayen, F. F.; Gutierrez, M. C.; Steinbüchel, A.; Tindall, B. J.; Rehm, B. H. A. (2009). "Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil". International Journal of Systematic and Evolutionary Microbiology. 60 (3): 633–637. doi:10.1099/ijs.0.013078-0. ISSN 1466-5026. PMID 19654343.

[11] Minegishi, Hiroaki; Shimogaki, Ryuta; Enomoto, Shigeaki; Echigo, Akinobu; Kondo, Yusuke; Nagaoka, Shuhei; Shimane, Yasuhiro; Kamekura, Masahiro; Itoh, Takashi; Ohkuma, Moriya; Nunoura, Takuro; Takai, Ken; Usami, Ron (2016). "Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt". International Journal of Systematic and Evolutionary Microbiology. 66 (12): 4975–4980. doi:10.1099/ijsem.0.001455. ISSN 1466-5026. PMID 27562780.

[Zhang2013-12] Zhang, W.-Y.; Meng, Y.; Zhu, X.-F.; Wu, M. (2013). "Halopiger salifodinae sp. nov., an extremely halophilic archaeon isolated from a salt mine". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt 10): 3563–3567. doi:10.1099/ijs.0.050971-0. ISSN 1466-5026. PMID 23563233.

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Halopiger

Phylogeny

See also

References

Further reading

Scientific journals

Scientific books