Template:Infobox protein family/sandbox

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Infobox protein family/sandbox
Identifiers
Symbol ?
Template documentation[view] [edit] [history] [purge]

This is template for a protein family/domain as defined in biological databases such as Pfam.

Usage[edit]

To use this template, copy the following text and paste it at the top of your article. Fill in as many fields as possible, but don't worry if some information is missing.

{{Infobox protein family
| Symbol = 
| Name = 
| image = 
| width = 
| caption = 
| Pfam = 
| Pfam_clan = 
| InterPro = 
| SMART = 
| PROSITE = 
| MEROPS =
| CATH =
| SCOP = 
| TCDB = 
| OPM family = 
| OPM protein = 
| CAZy = 
| CDD =
}}

Examples[edit]

The following filled in Pfam infobox template produces the information box to the right.

Ligand-binding domain (LBD)
RORC 3L0L.png
Identifiers
Symbol Hormone_recep
Pfam PF00104
InterPro IPR000536
SMART SM00430
CATH 1lbd
SCOP 1lbd
SUPERFAMILY 1lbd
CDD cd06157
{{Infobox protein family
| Symbol = Hormone_recep
| Name = Ligand-binding domain (LBD)
| image = RORC_3L0L.png
| width = 
| caption = [[RAR-related orphan receptor gamma|RORγ]]
| Pfam = PF00104
| InterPro = IPR000536
| SMART = SM00430
| PROSITE = 
| SCOP = 1lbd
| CATH = 1lbd
| TCDB =
| OPM family =
| OPM protein =
| CDD = cd06157
}}

Maintenance[edit]

TemplateData[edit]

This is the TemplateData documentation for this template used by VisualEditor and other tools.

See the monthly error report for this template.

TemplateData for Infobox protein family

This is template for a protein family/domain as defined in biological databases such as Pfam.

Template parameters

Parameter Description Type Status
Symbol Symbol
Default
Example
empty
Auto value
empty
Line optional
Name Name
Default
Example
empty
Auto value
empty
Line optional
Image image
Default
Example
empty
Auto value
empty
Page optional
Width width

Width for image

Default
Example
empty
Auto value
empty
String optional
Caption caption

Caption for image

Default
Example
empty
Auto value
empty
String optional
Pfam family identifier Pfam

Auto-links to Pfam family record

Default
Example
empty
Auto value
empty
Line optional
Pfam clan identifier Pfam_clan

Auto-links to Pfam clan record; a clan is a group of related families.

Default
Example
empty
Auto value
empty
Line optional
Interpro identifier Interpro

Auto-links to an Interpro entry

Default
Example
empty
Auto value
empty
Line optional
SMART accession number SMART

Auto-links to a domain entry in the Simple Modular Architecture Research Tool

Default
Example
empty
Auto value
empty
Line optional
PROSITE record identifier PROSITE

Auto-links to a PROSITE record search

Default
Example
empty
Auto value
empty
Line optional
MEROPS record identifier MEROPS

Auto-links to a MEROPS record (MEROPS is scoped to peptidases and their inhibitors)

Default
Example
empty
Auto value
empty
Line optional
SCOP (PDB accession number) SCOP

Given a PDB accession number, auto-links to a SCOP (Structural Classification of Proteins) family level page. Also generates an auto-link to a SCOP SUPERFAMILY record.

Default
Example
empty
Auto value
empty
Line optional
CATH (PDB accession number) CATH

Given a PDB accession number, auto-links to CATH (Classification of Protein Structural Domains).

Default
Example
empty
Auto value
empty
Line optional
TCDB identifier TCDB

Auto-links to an identifier search in the Transporter Classification Database

Default
Example
empty
Auto value
empty
Line optional
OPM superfamily identifier OPM family

Auto-links to a superfamily record in the database of Orientations of Proteins in Membranes.

Default
Example
empty
Auto value
empty
Line optional
OPM protein identifier OPM protein

Value will typically be a PDB identifier; auto-links to a protein record in the database of Orientations of Proteins in Membranes

Default
Example
empty
Auto value
empty
Line optional
CAZy family identifier CAZy

Auto-links to a family description page in the database of Carbohydrate-Active enZYmes.

Default
Example
empty
Auto value
empty
Line optional
CDD uid CDD

Auto-links to a record in the Conserved Domain Database

Default
Example
empty
Auto value
empty
Line optional