Treponema

From Wikipedia, the free encyclopedia
Jump to: navigation, search
Treponema
Treponema pallidum spirochaetes.
Scientific classification
Domain: Bacteria
Phylum: Spirochaetes
Class: Spirochaetes Cavalier-Smith 2002
Order: Spirochaetales Buchanan 1917
Family: Spirochaetaceae Swellengrebel 1907
Genus: Treponema Schaudinn 1905
Species

Treponema is a bacterial genus. The major species is Treponema pallidum, whose subspecies are responsible for diseases such as syphilis and yaws.

The species Treponema hyodysenteriae and Treponema innocens have been reclassified into Serpula.[1]

In the early 2000's they have again been reclassified into the family Brachyspiraceae.

Treponema paraluiscuniculi is associated with syphilis in rabbits.[2]

Treponema carateum is the cause of pinta.[3]

[edit] Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [4] and National Center for Biotechnology Information (NCBI)[5] and the phylogeny is based on 16S rRNA-based LTP release 106 by The All-Species Living Tree Project [6]



?T. bryantii Stanton and Canale-Parola 1980



?T. calligyrumNoguchi



?T. carateum ♥ (pinta causing Treponema)



?T. minutumDobell 1912


 ?T. pallidum

T. p. endemicumSmibert 1984 (bejel causing Treponema)



T. p. pallidum(Schaudinn and Hoffmann 1905) Schaudinn 1905 (syphilis causing Treponema)




?T. paraluiscuniculi(Jacobsthal 1920) Smibert 1974



?T. pertenue(Castellani 1905) Castellani and Chalmers 1910 (yaws causing Treponema)


 ?T. phagedenis

T. p. phagedenis(Noguchi 1912) Brumpt



T. p. vaccaeEvans et al. 2006




?T. refringens(Schaudinn and Hofmann 1905) Castellani and Chalmers



?T. vincentii



?T. zioleckiiPiknova et al. 2008




Spirochaeta caldaria Pohlschroeder et al. 1995




T. isoptericolens Dröge et al. 2008




T. azotonutricium Graber et al. 2004



T. primitia Graber et al. 2004







 T. medium

T. m. bovisEvans et al. 2006



T. m. mediumUmemoto et al. 1997





T. pedis Evans et al. 2009




T. denticola (ex Flügge 1886) Chan et al. 1993



T. putidum Wyss et al. 2004








T. lecithinolyticum Wyss et al. 1999



T. maltophilum Wyss et al. 1996





T. brennaborense Schrank et al. 1999




T. parvum Wyss et al. 2001



 T. socranskii

T. s. buccale Smibert et al. 1984



T. s. paredis Smibert et al. 1984



T. s. socranskii Smibert et al. 1984





T. amylovorum Wyss et al. 1997




T. porcinum Nordhoff et al. 2005




T. succinifaciens Cwyk and Canale-Parola 1981




T. saccharophilum Paster and Canale-Parola 1986




T. berlinense Nordhoff et al. 2005



T. pectinovorum Smibert and Burmeister 1983













Notes:
♦ Type strain lost or not available
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LSPN)
♥ Strains not lodged at National Center for Biotechnology Information (NCBI) or listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)

[edit] References

  1. ^ Stanton TB, Jensen NS, Casey TA, Tordoff LA, Dewhirst FE, Paster BJ (January 1991). "Reclassification of Treponema hyodysenteriae and Treponema innocens in a new genus, Serpula gen. nov., as Serpula hyodysenteriae comb. nov. and Serpula innocens comb. nov". Int. J. Syst. Bacteriol. 41 (1): 50–8. doi:10.1099/00207713-41-1-50. PMID 1704792. http://ijs.sgmjournals.org/cgi/pmidlookup?view=long&pmid=1704792. 
  2. ^ Harper KN, Liu H, Ocampo PS, et al. (August 2008). "The sequence of the acidic repeat protein (arp) gene differentiates venereal from nonvenereal Treponema pallidum subspecies, and the gene has evolved under strong positive selection in the subspecies that causes syphilis". FEMS Immunol. Med. Microbiol. 53 (3): 322–32. doi:10.1111/j.1574-695X.2008.00427.x. PMID 18554302. http://www3.interscience.wiley.com/resolve/openurl?genre=article&sid=nlm:pubmed&issn=0928-8244&date=2008&volume=53&issue=3&spage=322. 
  3. ^ Antal GM, Lukehart SA, Meheus AZ (January 2002). "The endemic treponematoses". Microbes Infect. 4 (1): 83–94. doi:10.1016/S1286-4579(01)01513-1. PMID 11825779. http://linkinghub.elsevier.com/retrieve/pii/S1286457901015131. 
  4. ^ J.P. Euzéby. "Treponema". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. http://www.bacterio.cict.fr/classifphyla.html#Spirochaetes. Retrieved 2011-11-17. 
  5. ^ Sayers et al.. "Treponema". National Center for Biotechnology Information (NCBI) taxonomy database [2]. http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=157&lvl=3&lin. Retrieved 2011-06-05. 
  6. ^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)". Silva Comprehensive Ribosomal RNA Database [3]. http://www.arb-silva.de/fileadmin/silva_databases/living_tree/LTP_release_106/LTPs106_SSU_tree.pdf. Retrieved 2011-11-17. 
Personal tools
Namespaces
Variants
Actions
Navigation
Interaction
Toolbox
Print/export
Languages