Jump to content

FCB superphylum

From Wikipedia, the free encyclopedia

This is an old revision of this page, as edited by Paul2520 (talk | contribs) at 21:53, 18 April 2020 (added missing notes list -- you can help @ Category:Pages with missing references list). The present address (URL) is a permanent link to this revision, which may differ significantly from the current revision.

FCB group
Bacteroides spp.
Scientific classification
Domain:
(unranked):
Superphylum:
FCB group
Phyla
Synonyms

Sphingobacteria Cavalier-Smith, 1987[1]

The Bacteroidetes-Chlorobi group in brown is visible on this 2016 tree of life using ribosomal protein sequences[2]

The FCB group is a superphylum of bacteria named after the main member phyla Fibrobacteres, Chlorobi, and Bacteroidetes. The members are considered to form a clade due to a number of conserved signature indels.[3]

Cavalier-Smith calls the equivalent grouping a phylum by the name of Sphingobacteria. It contains the classes Chlorobea (= Chlorobi), Fibrobacteres, Bacteroidetes[a] and Flavobacteria. However, this megaclassification is not followed by the larger scientific community.[4][5][6]

FCB group[3]

Fibrobacteres

An analogous situation is seen with the PVC group/Planctobacteria.

Notes

  1. ^ Different from the accepted Bacteroidetes, which consists of Bacteroidia (equivalent to Cavalier-Smith's Bacteroidetes), Cytophagia and Flavobacteriia and Sphingobacteriia.

References

  1. ^ Cavalier-Smith, T. (1987). The origin of cells: a symbiosis between genes, catalysts and membranes. Cold Spring Harbor Symposia on Quantitative Biology 52, 805-24, [1], [2].
  2. ^ Hug, Laura A.; Baker, Brett J.; Anantharaman, Karthik; Brown, Christopher T.; Probst, Alexander J.; Castelle, Cindy J.; Butterfield, Cristina N.; Hernsdorf, Alex W.; Amano, Yuki; Ise, Kotaro; Suzuki, Yohey; Dudek, Natasha; Relman, David A.; Finstad, Kari M.; Amundson, Ronald; Thomas, Brian C.; Banfield, Jillian F. (11 April 2016). "A new view of the tree of life". Nature Microbiology. 1 (5): 16048. doi:10.1038/nmicrobiol.2016.48. PMID 27572647.
  3. ^ a b Gupta, R. S. (2004). "The Phylogeny and Signature Sequences Characteristics of Fibrobacteres, Chlorobi, and Bacteroidetes". Critical Reviews in Microbiology. 30 (2): 123–143. doi:10.1080/10408410490435133. PMID 15239383.
  4. ^ Cavalier-Smith T (2006). "Rooting the tree of life by transition analyses". Biol. Direct. 1: 19. doi:10.1186/1745-6150-1-19. PMC 1586193. PMID 16834776.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  5. ^ Krieg, N.R.; Ludwig, W.; Whitman, W.B.; Hedlund, B.P.; Paster, B.J.; Staley, J.T.; Ward, N.; Brown, D.; Parte, A. (November 24, 2010) [1984(Williams & Wilkins)]. George M. Garrity (ed.). The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. Bergey's Manual of Systematic Bacteriology. Vol. 4 (2nd ed.). New York: Springer. p. 908. ISBN 978-0-387-95042-6. British Library no. GBA561951.
  6. ^ Classification in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.