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FAM18B1

From Wikipedia, the free encyclopedia
TVP23B
Identifiers
AliasesTVP23B, FAM18B, FAM18B1, NPD008, YDR084C, CGI-148, trans-golgi network vesicle protein 23 homolog B (S. cerevisiae), trans-golgi network vesicle protein 23 homolog B
External IDsMGI: 1914760; HomoloGene: 128511; GeneCards: TVP23B; OMA:TVP23B - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_026210
NM_001356520
NM_001356521

RefSeq (protein)

NP_080486
NP_001343449
NP_001343450

Location (UCSC)Chr 17: 18.78 – 18.81 MbChr 11: 62.77 – 62.81 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Family with sequence similarity 18 member B1 (FAM18B1) is the hypothetical protein encoded by the gene LOC51030. Evidence for this protein only exists at the transcript level. The gene is found on chromosome 17 on the cytogenetic band 17p11.2.

This gene has two paralog in the human genome, LOC201158, which is located on chromosome 17 at 17p12, and TVP23A, which is located on chromosome 16. The duplication appears to have appeared after the MRCA of humans and apes. This gene has homologs in eukaryotes as far back as Trichoplax.

Gene

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LOC51030 is highly conserved in chordates and also shows conservation in eukaryotes, including fungi and plants.[5] It is located on Chromosome 17 at 18,684,582-18,710,026,[6] and the most common mRNA has 7 exons.

Protein

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This gene encode a protein of 205 amino acids in length and a predicted molecular weight of 23.57 kDa. This protein is predicted to have an isoelectric point of 8.62. It contains a domain of unknown function, DUF846, and a predicted phosphoserine site.[7] It is a multipass transmembrane protein and a member of the FAM18/TVP23 superfamily.

FAM18B1 appears to be ubiquitously expressed in all tissues, health states, and developmental stages to some level. There is also notable expression in bladder tissue.[8]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000171928Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000014177Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "UCSC Genome Browser".
  6. ^ "UniProt Database".
  7. ^ "EST Profile Database".