VARS

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VARS
Identifiers
Aliases VARS, G7A, VARS1, VARS2, valyl-tRNA synthetase, NDMSCA
External IDs MGI: 90675 HomoloGene: 4587 GeneCards: VARS
Gene location (Human)
Chromosome 6 (human)
Chr. Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for VARS
Genomic location for VARS
Band 6p21.33 Start 31,777,518 bp[1]
End 31,795,953 bp[1]
RNA expression pattern
PBB GE VARS 201797 s at fs.png

PBB GE VARS 201796 s at fs.png
More reference expression data
Orthologs
Species Human Mouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_006295

NM_011690

RefSeq (protein)

NP_006286
NP_006286.1

NP_035820

Location (UCSC) Chr 6: 31.78 – 31.8 Mb Chr 17: 35 – 35.02 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Valyl-tRNA synthetase is an enzyme that in humans is encoded by the VARS gene.[5][6]

Function[edit]

Aminoacyl-tRNA synthetases catalyze the aminoacylation of tRNA by their cognate amino acid. Because of their central role in linking amino acids with nucleotide triplets contained in tRNAs, aminoacyl-tRNA synthetases are thought to be among the first proteins that appeared in evolution. The protein encoded by this gene belongs to class-I aminoacyl-tRNA synthetase family and is located in the class III region of the major histocompatibility complex.[6]

See also[edit]

References[edit]

  1. ^ a b c ENSG00000096171, ENSG00000231945, ENSG00000227686, ENSG00000204394, ENSG00000224264, ENSG00000231116 GRCh38: Ensembl release 89: ENSG00000226589, ENSG00000096171, ENSG00000231945, ENSG00000227686, ENSG00000204394, ENSG00000224264, ENSG00000231116 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000007029 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". 
  4. ^ "Mouse PubMed Reference:". 
  5. ^ Bonnefond L, Fender A, Rudinger-Thirion J, Giegé R, Florentz C, Sissler M (March 2005). "Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: characterization of AspRS and TyrRS". Biochemistry. 44 (12): 4805–16. doi:10.1021/bi047527z. PMID 15779907. 
  6. ^ a b "Entrez Gene: VARS valyl-tRNA synthetase". 

Further reading[edit]

  • Hsieh SL, Campbell RD (September 1991). "Evidence that gene G7a in the human major histocompatibility complex encodes valyl-tRNA synthetase". The Biochemical Journal. 278 ( Pt 3) (3): 809–16. PMC 1151418Freely accessible. PMID 1898367. 
  • Sargent CA, Dunham I, Campbell RD (August 1989). "Identification of multiple HTF-island associated genes in the human major histocompatibility complex class III region". The EMBO Journal. 8 (8): 2305–12. PMC 401163Freely accessible. PMID 2477242. 
  • Bec G, Kerjan P, Zha XD, Waller JP (December 1989). "Valyl-tRNA synthetase from rabbit liver. I. Purification as a heterotypic complex in association with elongation factor 1". The Journal of Biological Chemistry. 264 (35): 21131–7. PMID 2556394. 
  • Wolfson AD, Orlovsky AF, Gladilin KL (October 1988). "Mammalian valyl-tRNA synthetase forms a complex with the first elongation factor". FEBS Letters. 238 (2): 262–4. doi:10.1016/0014-5793(88)80492-7. PMID 3169261. 
  • Bec G, Kerjan P, Waller JP (January 1994). "Reconstitution in vitro of the valyl-tRNA synthetase-elongation factor (EF) 1 beta gamma delta complex. Essential roles of the NH2-terminal extension of valyl-tRNA synthetase and of the EF-1 delta subunit in complex formation". The Journal of Biological Chemistry. 269 (3): 2086–92. PMID 8294461. 
  • Vilalta A, Donovan D, Wood L, Vogeli G, Yang DC (January 1993). "Cloning, sequencing and expression of a cDNA encoding mammalian valyl-tRNA synthetase". Gene. 123 (2): 181–6. doi:10.1016/0378-1119(93)90122-J. PMID 8428657. 
  • Motorin Y (May 1996). "Two human valyl-tRNA synthetase-encoding cDNA sequences deposited in GenBank display extensive differences". Gene. 170 (2): 289–91. doi:10.1016/0378-1119(96)84699-3. PMID 8666263. 
  • Xie T, Rowen L, Aguado B, Ahearn ME, Madan A, Qin S, Campbell RD, Hood L (December 2003). "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse". Genome Research. 13 (12): 2621–36. doi:10.1101/gr.1736803. PMC 403804Freely accessible. PMID 14656967. 
  • Bouwmeester T, Bauch A, Ruffner H, Angrand PO, Bergamini G, Croughton K, Cruciat C, Eberhard D, Gagneur J, Ghidelli S, Hopf C, Huhse B, Mangano R, Michon AM, Schirle M, Schlegl J, Schwab M, Stein MA, Bauer A, Casari G, Drewes G, Gavin AC, Jackson DB, Joberty G, Neubauer G, Rick J, Kuster B, Superti-Furga G (February 2004). "A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway". Nature Cell Biology. 6 (2): 97–105. doi:10.1038/ncb1086. PMID 14743216. 
  • Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514. 
  • Jiang S, Wolfe CL, Warrington JA, Norcum MT (November 2005). "Three-dimensional reconstruction of the valyl-tRNA synthetase/elongation factor-1H complex and localization of the delta subunit". FEBS Letters. 579 (27): 6049–54. doi:10.1016/j.febslet.2005.09.062. PMID 16229838. 
  • Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Molecular Systems Biology. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948Freely accessible. PMID 17353931.