TCHP

TCHP
Identifiers
Aliases	TCHP, TpMs, trichoplein keratin filament binding
External IDs	OMIM: 612654; MGI: 1925082; HomoloGene: 12686; GeneCards: TCHP; OMA:TCHP - orthologs
Gene location (Human)
Chr.	Chromosome 12 (human)
End	109,983,841 bp
Gene location (Mouse)
Chr.	Chromosome 5 (mouse)
End	114,860,388 bp
RNA expression pattern
	Top expressed in
	sural nerve; ; pancreatic ductal cell; ; sperm; ; mucosa of ileum; ; right hemisphere of cerebellum; ; skin of leg; ; skin of abdomen; ; endothelial cell; ; tibialis anterior muscle; ; apex of heart;
	Top expressed in
	spermatocyte; ; neural layer of retina; ; seminiferous tubule; ; otic vesicle; ; otolith organ; ; utricle; ; ventricular zone; ; genital tubercle; ; lens; ; substantia nigra;
	More reference expression data
	n/a
Gene ontology
Molecular function	protein binding;
Cellular component	cytoplasm; ciliary transition fiber; cell junction; centrosome; plasma membrane; apical cortex; desmosome; keratin filament; cytoskeleton; membrane; mitochondrion; cytosol;
Biological process	cell projection organization; negative regulation of cell growth; negative regulation of cilium assembly; apoptotic process;
	Sources:Amigo / QuickGO
Orthologs
	84260
	77832
	ENSG00000139437
	ENSMUSG00000002486
	Q9BT92
	Q3TVW5
	NM_001143852; NM_032300
	NM_029992
	NP_001137324; NP_115676
	NP_084268
	Wikidata
View/Edit Human	View/Edit Mouse

Trichoplein keratin filament-binding protein is a protein that in humans is encoded by the TCHP gene.^[5]^[6]

Model organisms

Model organisms have been used in the study of TCHP function. A conditional knockout mouse line called Tchp^{tm1a(EUCOMM)Wtsi} was generated at the Wellcome Trust Sanger Institute.^[7] Male and female animals underwent a standardized phenotypic screen^[8] to determine the effects of deletion.^[9]^[10]^[11]^[12] Additional screens performed: - In-depth immunological phenotyping^[13]

*Tchp* knockout mouse phenotype
Characteristic	Phenotype
All data available at.^[8]^[13]
Peripheral blood leukocytes 6 Weeks	Normal
Insulin	Normal
Haematology 6 Weeks	Abnormal
Homozygous viability at P14	Normal
Homozygous Fertility	Normal
Body weight	Normal
Neurological assessment	Normal
Grip strength	Normal
Dysmorphology	Normal
Indirect calorimetry	Normal
Glucose tolerance test	Normal
Auditory brainstem response	Normal
DEXA	Normal
Radiography	Normal
Eye morphology	Normal
Clinical chemistry	Abnormal
Haematology 16 Weeks	Normal
Peripheral blood leukocytes 16 Weeks	Normal
Heart weight	Normal
Salmonella infection	Normal
Cytotoxic T Cell Function	Normal
Spleen Immunophenotyping	Normal
Mesenteric Lymph Node Immunophenotyping	Normal
Bone Marrow Immunophenotyping	Normal
Epidermal Immune Composition	Normal
Influenza Challenge	Normal
Trichuris Challenge	Normal

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000139437 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000002486 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Nishizawa M, Izawa I, Inoko A, Hayashi Y, Nagata K, Yokoyama T, Usukura J, Inagaki M (Mar 2005). "Identification of trichoplein, a novel keratin filament-binding protein". Journal of Cell Science. 118 (Pt 5): 1081–90. doi:10.1242/jcs.01667. PMID 15731013.
^ "Entrez Gene: TCHP trichoplein, keratin filament binding".
^ Gerdin AK (2010). "The Sanger Mouse Genetics Programme: high throughput characterisation of knockout mice". Acta Ophthalmologica. 88: 925–7. doi:10.1111/j.1755-3768.2010.4142.x.
^ ^a ^b "International Mouse Phenotyping Consortium".
^ Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A (Jun 2011). "A conditional knockout resource for the genome-wide study of mouse gene function". Nature. 474 (7351): 337–42. doi:10.1038/nature10163. PMC 3572410. PMID 21677750.
^ Dolgin E (Jun 2011). "Mouse library set to be knockout". Nature. 474 (7351): 262–3. doi:10.1038/474262a. PMID 21677718.
^ Collins FS, Rossant J, Wurst W (Jan 2007). "A mouse for all reasons". Cell. 128 (1): 9–13. doi:10.1016/j.cell.2006.12.018. PMID 17218247.
^ White JK, Gerdin AK, Karp NA, Ryder E, Buljan M, Bussell JN, Salisbury J, Clare S, Ingham NJ, Podrini C, Houghton R, Estabel J, Bottomley JR, Melvin DG, Sunter D, Adams NC, Tannahill D, Logan DW, Macarthur DG, Flint J, Mahajan VB, Tsang SH, Smyth I, Watt FM, Skarnes WC, Dougan G, Adams DJ, Ramirez-Solis R, Bradley A, Steel KP (Jul 2013). "Genome-wide generation and systematic phenotyping of knockout mice reveals new roles for many genes". Cell. 154 (2): 452–64. doi:10.1016/j.cell.2013.06.022. PMC 3717207. PMID 23870131.
^ ^a ^b "Infection and Immunity Immunophenotyping (3i) Consortium".

Seibert JA, Boone JM (Mar 2005). "X-ray imaging physics for nuclear medicine technologists. Part 2: X-ray interactions and image formation". Journal of Nuclear Medicine Technology. 33 (1): 3–18. PMID 15731015.
Tokumasu F, Fairhurst RM, Ostera GR, Brittain NJ, Hwang J, Wellems TE, Dvorak JA (Mar 2005). "Band 3 modifications in Plasmodium falciparum-infected AA and CC erythrocytes assayed by autocorrelation analysis using quantum dots". Journal of Cell Science. 118 (Pt 5): 1091–8. doi:10.1242/jcs.01662. PMID 15731014.
Katanick SL (Mar 2005). "Fundamentals of ICANL accreditation". Journal of Nuclear Medicine Technology. 33 (1): 19–23. PMID 15731016.
Panzegrau B, Gordon L, Goudy GH (Mar 2005). "Outpatient therapeutic 131I for thyroid cancer". Journal of Nuclear Medicine Technology. 33 (1): 28–30. PMID 15731017.
Yu JQ, Zhuang H, Xiu Y, El-Haddad G, Kumar R, Alavi A (Mar 2005). "Small urine leak after renal transplantation: detection by delayed 99mTc-DTPA renography--a case report". Journal of Nuclear Medicine Technology. 33 (1): 31–3. PMID 15731018.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.

This article on a gene on human chromosome 12 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000139437 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000002486 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid15731013-5] Nishizawa M, Izawa I, Inoko A, Hayashi Y, Nagata K, Yokoyama T, Usukura J, Inagaki M (Mar 2005). "Identification of trichoplein, a novel keratin filament-binding protein". Journal of Cell Science. 118 (Pt 5): 1081–90. doi:10.1242/jcs.01667. PMID 15731013.

[entrez-6] "Entrez Gene: TCHP trichoplein, keratin filament binding".

[mgp_reference-7] Gerdin AK (2010). "The Sanger Mouse Genetics Programme: high throughput characterisation of knockout mice". Acta Ophthalmologica. 88: 925–7. doi:10.1111/j.1755-3768.2010.4142.x.

[IMPCsearch_ref-8] "International Mouse Phenotyping Consortium".

[pmid21677750-9] Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A (Jun 2011). "A conditional knockout resource for the genome-wide study of mouse gene function". Nature. 474 (7351): 337–42. doi:10.1038/nature10163. PMC 3572410. PMID 21677750.

[mouse_library-10] Dolgin E (Jun 2011). "Mouse library set to be knockout". Nature. 474 (7351): 262–3. doi:10.1038/474262a. PMID 21677718.

[mouse_for_all_reasons-11] Collins FS, Rossant J, Wurst W (Jan 2007). "A mouse for all reasons". Cell. 128 (1): 9–13. doi:10.1016/j.cell.2006.12.018. PMID 17218247.

[pmid23870131-12] White JK, Gerdin AK, Karp NA, Ryder E, Buljan M, Bussell JN, Salisbury J, Clare S, Ingham NJ, Podrini C, Houghton R, Estabel J, Bottomley JR, Melvin DG, Sunter D, Adams NC, Tannahill D, Logan DW, Macarthur DG, Flint J, Mahajan VB, Tsang SH, Smyth I, Watt FM, Skarnes WC, Dougan G, Adams DJ, Ramirez-Solis R, Bradley A, Steel KP (Jul 2013). "Genome-wide generation and systematic phenotyping of knockout mice reveals new roles for many genes". Cell. 154 (2): 452–64. doi:10.1016/j.cell.2013.06.022. PMC 3717207. PMID 23870131.

[iii_ref-13] "Infection and Immunity Immunophenotyping (3i) Consortium".

[1]

[2]

[3]

[4]

[5]

[6]

[7]

[8]

[9]

[10]

[11]

[12]

[13]

Model organisms

References

Further reading