Genetic correlation
In multivariate behavioral & quantitative genetics, a genetic correlation (denoted or ) is the proportion of variance that two traits share due to genetic causes,[1][2] the correlation between the genetic influences on a trait and the genetic influences on a different trait[3][4][5][6][7][8][9] estimating the degree of pleiotropy or causal overlap. A genetic correlation of 0 implies that the genetic effects on one trait are independent of the other, while a correlation of 1 implies that all of the genetic influences on the two traits are identical. The bivariate genetic correlation can be generalized to inferring genetic latent variable factors across >2 traits using factor analysis. Genetic correlation models were introduced into behavioral genetics in the 1970s-1980s.
Genetic correlations have applications in validation of GWAS results, breeding, prediction of traits, and discovering the etiology of traits & diseases.
They can be estimated using twin studies and molecular genetics. Genetic correlations have been found to be common in non-human genetics[10] and to be broadly similar to their respective phenotypic correlations,[11] but also in human traits.[12][13][14][15][16][17][18][19] This finding of widespread pleiotropy has implications for artificial selection in agriculture, interpretation of phenotypic correlations, attempts to use Mendelian randomization in causal inference,[20][21][22][23][24] the understanding of the biological origins of complex traits, and the design of GWASes.
A genetic correlations is to be contrasted with environment correlations between the environments affecting two traits (eg if poor nutrition in a household caused both lower IQ and height); a genetic correlation between two traits can contribute to the observed (phenotypic) correlation between two traits, but genetic correlations can also be opposite observed phenotypic correlations if the environment correlation is sufficiently strong in the other direction, perhaps due to tradeoffs or specialization.[25][26]
Interpretation
Genetic correlations are not the same as heritability, as it is about the overlap between the two sets of influences and not their absolute magnitude; two traits could be both highly heritable but not be genetically correlated or have small heritabilities and be completely correlated (as long as the heritabilities are non-zero).
For example, consider two traits - dark skin and black hair. These two traits may individually have a very high heritability (most of the population-level variation in the trait due to genetic differences, or in simpler terms, genetics contributes significantly to these two traits), however, they may still have a very low genetic correlation if, for instance, these two traits were being controlled by different, non-overlapping, non-linked genetic loci.
A genetic correlation between two traits will tend to produce phenotypic correlations - eg the genetic correlation between intelligence and SES[14] or education and family SES[27] implies that intelligence/SES will also correlate phenotypically. The phenotypic correlation will be limited by the degree of genetic correlation and also by the heritability of each trait. The expected phenotypic correlation is the bivariate heritability' and can be calculated as the square roots of the heritabilities multiplied by the genetic correlation. (Using a Plomin example,[28] for two traits with heritabilities of 0.60 & 0.23, , and phenotypic correlation of r=0.45 the bivariate heritability would be , so of the observed phenotypic correlation, 0.28/0.45 = 62% of it is due to genetics.)
Cause
Genetic correlations can arise due to:[17]
- linkage disequilibrium (two neighboring genes tend to be inherited together, each affecting a different trait)
- biological pleiotropy (a single gene having multiple otherwise unrelated biological effects)
- mediated pleiotropy (a gene causes trait X and trait X causes trait Y).
- biases: population stratification such as ancestry or assortative mating (sometimes called "gametic phase disequilibrium"), spurious stratification such as ascertainment bias/self-selection[29] or Berkson's paradox, or misclassification of diagnoses
Uses
Causes of changes in traits
Genetic correlations are scientifically useful because genetic correlations can be analyzed over time within an individual longitudinally[30] (eg intelligence is stable over a lifetime, due to the same genetic influences - childhood genetically correlates with old age[31]), or across studies or populations or ethnic groups/races, or across diagnoses, allowing discovery of whether different genes influence a trait over a lifetime (typically, they do not[3]), whether different genes influence a trait in different populations due to differing local environments, whether there is disease heterogeneity across times or places or sex (particularly in psychiatric diagnoses there is uncertainty whether 1 country's 'autism' or 'schizophrenia' is the same as another's or whether diagnostic categories have shifted over time/place leading to different levels of ascertainment bias), and to what degree traits like autoimmune or psychiatric disorders or cognitive functioning meaningfully cluster due sharing a biological basis and genetic architecture (for example, reading & mathematics disability genetically correlate, consistent with the Generalist Genes Hypothesis, and these genetic correlations explain the observed phenotypic correlations or 'co-morbidity';[32] IQ and specific measures of cognitive performance such as verbal, spatial, and memory tasks, reaction time, long-term memory, executive function etc all show high genetic correlations as do neuroanatomical measurements, and the correlations may increase with age, with implications for the etiology & nature of intelligence). This can be an important constraint on conceptualizations of the two traits: traits which seem different phenotypically but which share a common genetic basis require an explanation for how these genes can influence both traits.
Boosting GWASes
Genetic correlations can be used in GWASes by using polygenic scores or genome-wide hits for one (often more easily measured) trait to increase the prior probability of variants for a second trait; for example, since intelligence and years of education are highly genetically correlated, a GWAS for education will inherently also be a GWAS for intelligence and be able to predict variance in intelligence as well[33] and the strongest SNP candidates can be used to increase the statistical power of a smaller GWAS,[34] or one could do a GWAS for multiple traits jointly.[35]
Breeding
Hairless dogs have imperfect teeth; long-haired and coarse-haired animals are apt to have, as is asserted, long or many horns; pigeons with feathered feet have skin between their outer toes; pigeons with short beaks have small feet, and those with long beaks large feet. Hence if man goes on selecting, and thus augmenting any peculiarity, he will almost certainly modify unintentionally other parts of the structure, owing to the mysterious laws of correlation.
— Charles Darwin, The Origin of Species, 1859
Genetic correlations are also useful in applied contexts such as plant/animal breeding by allowing substitution of more easily measured but highly genetically correlated characteristics (particularly in the case of sex-linked or binary traits under the liability-threshold model, where differences in the phenotype can rarely be observed but another highly correlated measure, perhaps an endophenotype, is available in all individuals), compensating for different environments than the breeding was carried out in, making more accurate predictions of breeding value using the multivariate breeder's equation as compared to predictions based on the univariate breeder's equation using only per-trait heritability & assuming independence of traits, and avoiding unexpected consequences by taking into consideration that artificial selection for/against trait X will also increase/decrease all traits which positively/negatively correlate with X.[36][37][38][39][40]
Breeding experiments on genetically correlated traits can measure the extent to which correlated traits are inherently developmentally linked & response is constrained, and which can be dissociated.[41] Some traits, such as the size of eye spots on the butterfly Bicyclus anynana can be dissociated in breeding,[42] but other pairs, such as eye spot colors, have resisted efforts.[43]
Computing the genetic correlation
Genetic correlations require a genetically informative sample. They can be estimated by using breeding experiments on two traits of known heritability and selecting on one trait to measure the change in the other trait (allowing inferring the genetic correlation), family/adoption/twin studies (analyzed using SEMs or DeFries-Fulker extremes analysis), molecular estimation of relatedness such as GCTA,[44] methods employing polygenic scores like LD score regression,[15][45] BOLT-REML[46] or HESS,[47] comparison of genome-wide SNP hits in GWASes (as a loose lower bound), and phenotypic correlations of populations with at least some related individuals.[48] (As with estimating SNP heritability, the better computational scaling & the ability to estimate only using public polygenic scores is a particular advantage for LD score regression over competing methods, and combined with the increasing availability of polygenic scores from datasets like the UK Biobank has led to an explosion of genetic correlation research in the 2010s.) The methods are related to Haseman-Elston regression & PCGC regression.[49]
One way to consider it is using trait X in twin 1 to predict trait Y in twin 2 for monozygotic and dizygotic twins (ie using twin 1's IQ to predict twin 2's brain volume); if this cross-correlation is larger for the more genetically-similar monozygotic twins than for the dizygotic twins, the similarity indicates that the traits are not genetically independent and there is some common genetics influencing both IQ and brain volume. (Statistical power can be boosted by using siblings as well.[50])
Genetic correlations are affected by methodological concerns; underestimation of heritability, such as due to assortative mating, will lead to overestimates of longitudinal genetic correlation,[51] and moderate levels of misdiagnoses can create pseudo correlations.[52] As they are affected by heritabilities of both traits, genetic correlations have low statistical power, especially in the presence of measurement errors biasing heritability downwards, because "estimates of genetic correlations are usually subject to rather large sampling errors and therefore seldom very precise": the standard error of an estimate is .[53] (Larger genetic correlations & heritabilities will be estimated more precisely.[54]) However, inclusion of genetic correlations in an analysis of a pleiotropic trait can boost power for the same reason that multivariate regressions are more powerful than separate univariate regressions.[55]
Twin methods have the advantage of being usable without detailed biological data, with human genetic correlations calculated as far back as the 1970s and animal/plant genetic correlations calculated in the 1930s, and require sample sizes in the hundreds for being well-powered, but they have the disadvantage of making assumptions which have been criticized, and in the case of rare traits like anorexia nervosa it may be difficult to find enough twins with a diagnosis to make meaningful cross-twin comparisons, and can only be estimated with access to the twin data; molecular genetic methods like GCTA or LD score regression have the advantage of not requiring specific degrees of relatedness and so can easily study rare traits using case-control designs, which also reduces the number of assumptions they rely on, but those methods could not be run until recently, require large sample sizes in the thousands or hundreds of thousands (to obtain precise SNP heritability estimates, see the standard error formula), may require individual-level genetic data (in the case of GCTA but not LD score regression)
Given a genetic covariance matrix, the genetic correlation is computed by standardizing this, i.e., by converting the covariance matrix to a correlation matrix. For example, if two traits, say height and weight have the following additive genetic variance-covariance matrix:
Height | Weight | |
Height | 36 | 36 |
Weight | 36 | 117 |
Then the genetic correlation is .55, as seen is the standardized matrix below:
Height | Weight | |
Height | 1 | |
Weight | .55 | 1 |
In practice, structural equation modeling applications such as Mx or OpenMx (and before that, historically, LISREL[56]) are used to calculate both the genetic covariance matrix and its standardized form. In R, cov2cor() will standardize the matrix.
Typically, published reports will provide genetic variance components that have been standardized as a proportion of total variance (for instance in an ACE twin study model standardised as a proportion of V-total = A+C+E). In this case, the metric for computing the genetic covariance (the variance within the genetic covariance matrix) is lost (because of the standardizing process), so you cannot readily estimate the genetic correlation of two traits from such published models. Multivariate models (such as the Cholesky decomposition[better source needed]) will, however, allow the viewer to see shared genetic effects (as opposed to the genetic correlation) by following path rules. It is important therefore to provide the unstandardised path coefficients in publications.
Correlations
This list (which may have dates, numbers, etc.) may be better in a sortable table format. (October 2016) |
Human correlations
Genetic correlations have been measured for a wide variety of human traits.
Anthropometric
- facial averageness/attractiveness[57]
- baldness[58]
- tiredness/forced expiratory volume[59]
- tiredness/grip strength[59]
- tiredness/self-rated health[59]
- tiredness/longevity[59]
- self-reported health/longevity[60]
- life satisfaction/positive affect[61]
- exercise/longevity[62]
- self-reported health/forced expiratory volume in one second (FEV1)[60]
- tiredness/obesity[59]
- tiredness/BMI[59]
- baseline BMI/increase in BMI[63]
- chronotype/BMI[64]
- undersleeping/BMI[64]
- oversleeping/BMI[64]
- morning chronotype/BMI[65]
- difficulty sleeping/BMI[65]
- difficulty sleeping/waist circumference[65]
- difficulty sleeping/waist-hip ratio[65]
- difficulty sleeping/neck bone mineral density[65]
- daytime sleepiness/BMI[65]
- daytime sleepiness/self-reported sleep duration[65]
- daytime sleepiness/difficulty sleeping[65]
- daytime sleepiness/waist circumference[65]
- daytime sleepiness/waist-hip ratio[65]
- sex/sleep pattern[66]
- sex/sleep quality[66]
- self-reported sleep duration/birth weight[65]
- self-reported sleep duration/difficulty sleeping[65]
- self-reported sleep duration/neck bone mineral density[65]
- difficulty sleeping/birth weight[65]
- breast size/BMI[67]
- sweet taste perception/BMI[68]
- tiredness/waist-hip ratio[59]
- self-reported health/BMI[60]
- early puberty/BMI[69]
- age at first sex/BMI[70]
- exercise/BMI[71]
- exercise/waist circumference[71]
- body fat percentage/cardiorespiratory fitness (VO2max)[72]
- BMI/waist circumference[71]
- waist-hip ratio/BMI[73]
- fasting insulin/BMI[73]
- fasting glucose/waist-hip ratio[73]
- heart rate recovery/vagal rebound[74]
- longevity/resting heart rate[75]
- exercise/resting heart rate[74][76]
- exercise/heart rate recovery[74]
- exercise/respiratory sinus arrhythmia[76]
- ambulatory heart period/respiratory sinus arrhythmia[77]
- respiration rate/respiratory sinus arrhythmia[77][78]
- weight/height[79]
- birth weight//infant head circumference[80]
- birth weight/birth length[80]
- birth weight/childhood height[80]
- birth weight/adult height[80]
- birth weight/waist circumference[80]
- birth weight/hip circumference[80]
- birth weight/BMI[80]
- birth weight/childhood obesity[80]
- birth weight/adult obesity[80]
- birth weight/pubertal growth[80]
- age at first sex/height[70]
- age at first sex/birth weight[70]
- age at first sex/birth length[70]
- early puberty/age at first sex[70]
- early puberty/age at first birth[70]
- age at first sex/age at first birth[70]
- age at first sex/age at menarche[70]
- age at first sex/age at voice breaking[70]
- age at first sex/age at menopause[70]
- age at first sex/number of sexual partners[70]
- age at first sex/number of children ever born[70]
- age at first sex/childless[70]
- age at first sex/happiness[70]
- age at first birth/age at menarche[81]
- age at first birth/age at menopause[81]
- age at first birth/voice breaking[81]
- age at first birth/polycystic ovary syndrome[81]
- age at first birth/age at first sexual intercourse[81]
- age at first birth/birth weight[81]
- age at first birth/years of education[81]
- age at first birth/cigarettes per day[81]
- age at first birth/ever smoked[81]
- age at first birth/age onset of smoking[81]
- age at first birth/triglycerides[81]
- age at first birth/type 2 diabetes[81]
- age at first birth/fasting insulin level[81]
- age at first birth/waist-hip ratio[81]
- age at first birth/BMI[81]
- age at first birth/height[81]
- number of children ever born/age at first sexual intercourse[81]
- number of children ever born/years of education[81]
- anthropometric measurements made on the 6 major sub-populations of the Solomon Islands (Harvard Solomon Islands Project)[82]
- weight
- sitting height
- height
- biacromial diameter
- bicristal diameter (biiliac breadth)
- chest breadth
- foot length
- total facial height
- upper facial height
- nose length
- nose breadth
- bicondylar humerus diameter
- wrist breadth
- hand breadth
- hand length
- bicondylar femur diameter
- foot breadth
- head length
- head breadth
- minimum frontal diameter
- bizygomatic diameter
- bigonial diameter
- head circumference
- upper arm circumference
- calf circumference
- triceps skinfold thickness
- subscapular skinfold thickness
- intracranial volume/height[83]
- intracranial volume/child head circumference[83]
- intracranial volume/birth length[83]
- intracranial volume/birth weight[83]
- head motion/BMI[84]
- head motion/waist circumference[84]
- head motion/hypertension[84]
- head motion/monetary delay temporal discounting[84]
Neuroanatomical
- correlations between left/right hemisphere volume, volumes/thicknesses of individual regions, white matter connectivity, correlation between volume/thickness and cognitive performance on WM/IQ tests etc, stability of brain regions over time due to stable genetics[85][86][87][88][89][90][91][92][54][93][94][95][96][97][98][99][100][101][102][103][104][105][106][107][108][109][110] (see also brain size and intelligence)[111]
- epigenetic age acceleration/diffuse plaque[112]
- epigenetic age acceleration/neuritic plaque[112]
- epigenetic age acceleration/working memory[112]
- brain atrophy/blood pulse pressure[113]
- subcortical abnormal white matter/ependymal white matter[114]
- abnormal white matter/systolic blood pressure[115][116][117]
- Eyes Test empathy score/volume of the caudate nucleus[118]
- Eyes Test empathy score/volume of the putamen[118]
- head motion/default mode network connectivity[119]
Intelligence
- intelligence longitudinal stability and consistency [31][51][120][121][122][123][124]
- cognitive performance & neuroanatomical properties[85][88][91][92][94][99][101][111]
- behavioral/emotional problems in children[125]
- intelligence/reading[126][127]
- intelligence/longevity[128]
- tiredness/verbal-numerical reasoning [59]
- self-reported health/intelligence[60]
- age at first sex/intelligence[70]
- intelligence/Openness[129]
- intelligence/Conscientiousness[129][130]
- intelligence/SES[14][131]
- Coronary artery disease/verbal-numerical reasoning[13]
- Stroke: ischaemic/verbal-numerical reasoning[13]
- Stroke: cardioembolic/verbal-numerical reasoning[13]
- Stroke: large vessel disease/verbal-numerical reasoning[13]
- Stroke: small vessel disease/verbal-numerical reasoning[13]
- Type 2 diabetes/verbal-numerical reasoning[13]
- ADHD/verbal-numerical reasoning[13][132]
- ADHD/IQ[133]
- Alzheimer's disease/verbal-numerical reasoning[13]
- Autism/verbal-numerical reasoning[13][134]
- Bipolar disorder/verbal-numerical reasoning[13]
- Major depressive disorder/verbal-numerical reasoning[13]
- Schizophrenia/verbal-numerical reasoning[13]
- intelligence/temperament[135][136]
- Hippocampal volume/verbal-numerical reasoning[13]
- Intracranial volume (ICV)/verbal-numerical reasoning[13]
- intracranial volume/childhood cognitive function[83]
- intracranial volume/adult cognitive function[83]
- Infant head circumference/verbal-numerical reasoning[13]
- Blood pressure: diastolic/verbal-numerical reasoning[13]
- Blood pressure: systolic/verbal-numerical reasoning[13]
- BMI/verbal-numerical reasoning[13]
- intelligence/weight[79]
- Height/verbal-numerical reasoning[13]
- intelligence/height[79][137][138][139][140][141]
- Longevity/verbal-numerical reasoning[13]
- Forced expiratory volume in 1 s (FEV1)/verbal-numerical reasoning[13]
- Childhood cognitive ability/verbal-numerical reasoning[13]
- Coronary artery disease/reaction time[13]
- Stroke: ischaemic/reaction time[13]
- Stroke: cardioembolic/reaction time[13]
- Stroke: large vessel disease/reaction time[13]
- Stroke: small vessel disease/reaction time[13]
- Type 2 diabetes/reaction time[13]
- ADHD/reaction time[13][132]
- Alzheimer's disease/reaction time[13]
- Autism/reaction time[13]
- Bipolar disorder/reaction time[13]
- Major depressive disorder/reaction time[13]
- Schizophrenia/reaction time[13]
- Hippocampal volume/reaction time[13]
- Intracranial volume/reaction time[13]
- Infant head circumference/reaction time[13]
- Blood pressure: diastolic/reaction time[13]
- Blood pressure: systolic/reaction time[13]
- BMI/reaction time[13]
- Height/reaction time[13]
- Longevity/reaction time[13]
- Forced expiratory volume in 1 s (FEV1)/reaction time[13]
- Childhood cognitive ability/reaction time[13]
- Coronary artery disease/memory[13]
- Stroke: ischaemic/memory[13]
- Stroke: cardioembolic/memory[13]
- Stroke: large vessel disease/memory[13]
- Stroke: small vessel disease/memory[13]
- Type 2 diabetes/memory[13]
- ADHD/memory[13]
- Alzheimer's disease/memory[13]
- Autism/memory[13]
- Bipolar disorder/memory[13]
- Major depressive disorder/memory[13]
- Schizophrenia/memory[13]
- Hippocampal volume/memory[13]
- Intracranial volume/memory[13]
- Infant head circumference/memory[13]
- Blood pressure: diastolic/memory[13]
- Blood pressure: systolic/memory[13]
- BMI/memory[13]
- Height/memory[13]
- Longevity/memory[13]
- Forced expiratory volume in 1 s (FEV1)/memory[13]
- Childhood cognitive ability/memory[13]
- go-no-go/fast task reaction time[132]
- intelligence/reaction-time variability[132]
- intelligence/reaction-time[132]
- reaction-time variability/ADHD[132][142][143][144][145]
- reaction-time/reaction-time variability[132]
- frequency of talking or texting on smartphone/intelligence[146]
Education
- education longitudinal stability[147][148]
- education/family SES[27][149]
- education/SES[131][149][150][151]
- education/wealth[149]
- education/income[149][152]
- education/welfare[149]
- education/credit scores[149]
- education/social mobility[149]
- education/working overseas[149]
- education/financial literacy or difficulties[149]
- age at first sex/years of education[70]
- health/education[9][153]
- birth weight/education[80]
- self-reported health/education[60][154]
- education/self-efficacy[155]
- child-rated school environment/GCSE scores[156]
- education/personality[157]
- well-being/GCSE scores[156]
- education/behavioral problems[164][165][166][167]
- independent reading/reading ability and stability[149][168]
- book exposure/reading ability[169]
- reading fluency/reading comprehension[170]
- Coronary artery disease/educational attainment[13]
- Stroke: ischaemic/educational attainment[13]
- Stroke: cardioembolic/educational attainment[13]
- Stroke: large vessel disease/educational attainment[13]
- Stroke: small vessel disease/educational attainment[13]
- Type 2 diabetes/educational attainment[13]
- ADHD/educational attainment[13]
- Alzheimer's disease/educational attainment[13][162]
- Autism/educational attainment[13][171]
- Bipolar disorder/educational attainment[13][162]
- Major depressive disorder/educational attainment[13][154]
- Schizophrenia/educational attainment[13][162]
- Blood pressure: diastolic/educational attainment[13]
- Blood pressure: systolic/educational attainment[13]
- BMI/educational attainment[13][154]
- waist circumference/education[172]
- education/back pain[173]
- Height/educational attainment[13][162][174]
- Longevity/educational attainment[13][175]
- Forced expiratory volume in 1 s (FEV1)/educational attainment[13]
- Years of education/educational attainment[13]
- College degree/educational attainment[13]
- evening chronotype/educational attainment[65]
- Years of education/verbal-numerical reasoning[13]
- Years of education/reaction time[13]
- Years of education/memory[13]
- Hippocampal volume/educational attainment[13]
- Intracranial volume/educational attainment[13][162]
- Infant head circumference/educational attainment[13]
- Childhood cognitive ability/educational attainment[13]
- College degree/memory[13]
- College degree/reaction time[13]
- College degree/verbal-numerical reasoning[13]
- intelligence/GCSE scores[156]
- grades or exam scores in various school subjects arts/sciences[176][177][178][156][179][180][181]
- educational subject preferences[181]
- education/developmental milestones (smiling, walking, talking, feeding oneself, daytime potty training, communicating using sentences, and night-time potty training)[149]
- education/intelligence[34][79][129][130][131][135][147][149][150][151][162][164][177][180][182][183][184][185][186][187][188][189][190][191][192][193]
- highest level of mathematics class/college completion[194]
- highest level of mathematics class/years of education[194]
- highest level of mathematics class/working in a technical occupation[194]
- carry a tune/highest level of mathematics class[194]
- Eyes Test empathy score/years of college[118]
- Eyes Test empathy score/years of education[118]
- Eyes Test empathy score/intelligence[118]
- Systemizing Quotient-Revised (SQ-R)/years of college[195]
- difficulty sleeping/years of education[65]
- education/home environment[196]
- education/school environment[197]
Psychological
- food fussiness/food neophobia[198]
- dental fear/fear of pain[199]
- carry a tune/clap to a beat[194]
- carry a tune/perfect pitch[194]
- carry a tune/sing back musical notes[194]
- phonological coding/pig Latin task[200]
- phonological coding/rhyme-generation[200]
- longitudinal stability of planning/behavioral disinhibition (Porteus Maze Test)[201]
Psychiatric
- intellectual disabilities[202][203][204][205][206][207]
- psychiatric illnesses/property crime[213]
- schizophrenia/epilepsy[214]
- schizophrenia/bipolar disorder[35][215][216][217][218]
- schizophrenia/brain-volumes[219][220]
- schizophrenia/major depressive disorder[217]
- schizophrenia/autism[217]
- sleep/schizophrenia[221]
- tiredness/schizophrenia[59]
- self-reported health/schizophrenia[60]
- creativity/schizophrenia[222]
- age at first sex/schizophrenia[70]
- schizophrenia/HIV infection/risky sexual behavior[223]
- Empathy Quotient score/schizophrenia[195]
- self-reported sleep duration/schizophrenia[224]
- daytime sleepiness/schizophrenia[65]
- bipolar disorder/rheumatoid arthritis[44]
- bipolar disorder/type 2 diabetes[44]
- bipolar disorder/major depressive disorder[217]
- bipolar disorder/creativity[222]
- self-reported sleep duration/bipolar disorder[65]
- age at first sex/bipolar disorder[70]
- Empathy Quotient score/bipolar disorder[195]
- Systemizing Quotient-Revised (SQ-R)/bipolar disorder[195]
- brain region activation/bipolar disorder[225]
- tiredness/ADHD[59]
- major depressive disorder/ADHD[217]
- self-reported health/ADHD[60]
- autism/ADHD[226]
- age at first sex/autism[70]
- Empathy Quotient score/autism[195]
- Systemizing Quotient-Revised (SQ-R)/autism[195]
- age at first sex/ADHD[70]
- ADHD/tics[227]
- ADHD/obsessive-compulsive[227][228]
- intracranial volume/ADHD[220]
- ADHD/bipolar disorder[229]
- tiredness/bipolar disorder[59]
- tiredness/major depressive disorder[59]
- daytime sleepiness/major depressive disorder[65]
- difficulty sleeping/major depressive disorder[65]
- self-reported health/major depressive disorder[60]
- schizophrenia/major depressive disorder[230]
- bipolar disorder/major depressive disorder[230]
- age at first sex/major depressive disorder[70]
- migraine/Neuroticism[231]
- tiredness/Neuroticism[59]
- self-reported health/Neuroticism[60]
- Grit/Conscientiousness[158]
- Conscientiousness/Extraversion[232]
- Neuroticism/Extraversion[159][232]
- Openness/Extraversion[159][232]
- Extraversion: sociability and impulsiveness facets[233]
- frequency of talking or texting on smartphone/Extraversion[146]
- Neuroticism/Conscientiousness[159][232]
- Openness/Conscientiousness[232]
- Openness/Neuroticism[232]
- Eyes Test empathy score/Openness[118]
- Eyes Test empathy score/self-reported empathy (Empathy Quotient)[118]
- Neuroticism, extraversion, psychoticism, social attitudes scale, Wilson conservatism scale longitudinal stability[6]
- Neuroticism/loneliness[234]
- extraversion/loneliness[234]
- depression symptoms/loneliness[234]
- behavioral/emotional problems in children[125][235][236][237][238]
- antisocial behavior/Extraversion[239]
- antisocial behavior/Agreeableness[239]
- antisocial behavior/Conscientiousness[239]
- antisocial behavior/sensation seeking[239]
- antisocial behavior/urgency[239]
- antisocial behavior/lack of premeditation[239]
- antisocial behavior/lack of perseverance[239]
- antisocial behavior/Psychoticism[239]
- antisocial behavior/novelty seeking[239]
- antisocial behavior/impulsivity[239]
- antisocial behavior/reward dependence[239]
- antisocial behavior/depressive symptoms[240]
- longitudinal stability of antisocial symptoms[240]
- longitudinal stability of depressive symptoms[240]
- unipolar/bipolar depression[241]
- age at first sex/Alzheimers[70]
- age at first sex/risk-taking propensity[70]
- age at first sex/suffer from nerves[70]
- age at first sex/irritable personality[70]
- self-reported health/anorexia nervosa[60]
- age at first sex/anorexia nervosa[70]
- obsessive-compulsive disorder/anorexia nervosa[242]
- Eyes Test empathy score/anorexia nervosa[118]
- Empathy Quotient score/anorexia nervosa[195]
- Systemizing Quotient-Revised (SQ-R)/anorexia nervosa[195]
- Tourette syndrome/obsessive-compulsive disorder[228][243][244]
- hoarding/obsessive-compulsive syndrome[245][246]
- obsessive-compulsive disorder inventory/inventory subscales (checking, hoarding, obsessing, ordering, and washing)[247][248]
- excessive object acquisition/difficulties discarding possessions[249]
- compulsive hoarding/tics[245]
- obsessive-compulsive syndrome/tics[227][245]
- panic disorder/generalised anxiety disorder/phobias/obsessive-compulsive disorder/post-traumatic stress disorder[250][251][252]
- bulimia/anorexia nervosa[253]
- Right temporal pole surface area/anorexia nervosa[220]
- weight and shape concerns and behaviors/binge eating[254]
- obesity/binge eating[255]
- purging/binge eating[256]
- body dissatisfaction / weight preoccupation / binge eating[257]
- major depressive disorder/anorexia nervosa[258]
- Neuroticism/anorexia nervosa[259]
- Schizophrenia/anorexia nervosa[259]
- Psychiatric factor/anorexia nervosa[259]
- Years of education/anorexia nervosa[259]
- College attendance/anorexia nervosa[259]
- Extreme BMI/anorexia nervosa[259]
- Body fat percentage/anorexia nervosa[259]
- Overweight/anorexia nervosa[259]
- Hip circumference/anorexia nervosa[259]
- HDL cholesterol/anorexia nervosa[259]
- Phospholipids in large HDL/anorexia nervosa[259]
- Concentration of large HDL particles/anorexia nervosa[259]
- Total lipids in large HDL/anorexia nervosa[259]
- Cholesterol esters in large HDL/anorexia nervosa[259]
- Free cholesterol in large HDL/anorexia nervosa[259]
- Total cholesterol in large HDL/anorexia nervosa[259]
- Fasting glucose/anorexia nervosa[259]
- HOMA-Beta/anorexia nervosa[259]
- Fasting insulin/anorexia nervosa[259]
- HOMA-IR/anorexia nervosa[259]
- major depressive disorder/bulimia[260]
- Right temporal pole surface area/major depressive disorder[220]
- dementia with Lewy bodies/Alzheimers[261]
- dementia with Lewy bodies/Parkinson's[261]
- Alzheimers/Parkinson's[261]
- difficulty sleeping/Alzheimer's disease[65]
- intracranial volume/Parkinson's disease[83]
- autism/Social and Communication Disorders Checklist[134]
- childhood sexual abuse/age at first sex[262]
- stressful life-events/psychotic events[263]
- Subjective well-being / depressive symptoms[61]
- Subjective well-being / Neuroticism[61]
- Depressive symptoms / Neuroticism[61]
- menstrual symptoms/anxiety/depression/Neuroticism[264]
- life satisfaction/Neuroticism[265]
- positive affect/Neuroticism[265]
- Anxiety disorders / subjective well-being[61]
- Anxiety disorders / Neuroticism[61]
- Anxiety disorders / depressive symptoms[61]
- Autism spectrum disorder / subjective well-being[61]
- Autism spectrum disorder / Neuroticism[61]
- intracranial volume/autism spectrum disorder[220]
- Bipolar disorder / subjective well-being[61]
- Bipolar disorder / Neuroticism[61]
- Bipolar disorder / depressive symptoms[61]
- Schizophrenia / subjective well-being[61]
- Schizophrenia / Neuroticism[61]
- Schizophrenia / depressive symptoms[61]
- BMI / depressive symptoms[61]
- Coronary artery disease / depressive symptoms[61]
- Coronary artery disease/Neuroticism[61]
- general anxiety disorder/major depressive disorder[266][267][268][269][270][271][272]
- burnout/major depressive order[271]
- burnout/general anxiety disorder[271]
- major depressive disorder/phobias (agoraphobia / social / animal / situational phobia)[273]
- phobias/panic disorder/bulimia nervosa[272][274][275][276][277][278][279]
Drug use
- lifetime use of marijuana/tobacco[280]
- tiredness/smoking status[59]
- sugar consumption/drug use[281]
- age at first sex/ever-smoker[70]
- age at first sex/cigarettes per day[70]
- self-reported sleep duration/cigarettes per day[65]
- difficulty sleeping/cigarettes per day[65]
- daytime sleepiness/cigarettes per day[65]
- age at first sex/smoking at onset[70]
- age at first sex/alcohol consumption[70]
- alcohol consumption/ventral striatum activity/ADHD[282]
- Ever-smoker / subjective well-being[61]
- Ever-smoker / neuroticism[61]
- Ever-smoker / depressive symptoms[61]
- Smoking/education[283]
- alcohol drinking/education[283]
- alcohol effects on arithmetic performance / alcohol effects on motor coordination[284]
- willingness to drive drunk/Eysenck personality scales[285]
Biological
- tiredness/HDL cholesterol[59]
- tiredness/HbA1c[59]
- tiredness/triglycerides[59]
- self-reported health/systolic and diastolic blood pressure[60]
- birth weight/diastolic blood pressure[80]
- birth weight/systolic blood pressure[80]
- birth weight/total cholesterol[80]
- birth weight/HDL cholesterol[80]
- birth weight/LDL cholesterol[80]
- Triglycerides / subjective well-being[61]
- Triglycerides / neuroticism[61]
- Triglycerides / depressive symptoms[61]
- fasting insulin/triglycerides[73]
- fasting glucose/fasting triglycerides[73]
- waist-hip ratio/fasting triglycerides[73]
- fasting triglycerides/BMI[73]
- HDL/triglycerides[73]
- early puberty/fasting insulin[69]
- early puberty/lipid profiles[69]
- early puberty/bone mineral density[69]
- age at first sex/femoral neck bone mineral density[70]
- age at first sex/lumbar spine bone mineral density[70]
- age at first sex/fasting glucose[70]
- age at first sex/HDL cholesterol[70]
- age at first sex/LDL cholesterol[70]
- age at first sex/total cholesterol[70]
- age at first sex/triglycerides[70]
- age at first sex/fasting insulin[70]
- age at first sex/HbA1C[70]
- age at first sex/diastolic blood pressure[70]
- age at first sex/systolic blood pressure[70]
- fasting HDL/BMI[73]
- systolic blood pressure/BMI[73]
- waist-hip ratio/fasting glucose[73]
- waist-hip ratio/fasting insulin[73]
- waist-hip ratio/HDL[73]
- waist-hip ratio/systolic blood pressure[73]
- fasting glucose/fasting insulin[73]
- fasting glucose/HDL[73]
- fasting glucose/systolic blood pressure[73]
- fasting insulin/HDL[73]
- fasting insulin/systolic blood pressure[73]
- HDL/systolic blood pressure[73]
- liver enzymes/total cholesterol[19]
- liver enzymes/LDL cholesterol[19]
- liver enzymes/HDL cholesterol[19]
- liver enzymes/triglycerides[19]
- liver enzymes/glucose[19]
- liver enzymes/insulin[19]
- liver enzymes/HOMA-B[19]
- liver enzymes/HOMA-IR[19]
- liver enzymes/c-reactive protein[19]
- liver enzymes/alcohol consumption[19]
Disease
- immune disorders[18][286][287][288]
- tiredness/type 2 diabetes[59]
- sleep/type 2 diabetes[221]
- Type 2 diabetes/hypertension[44][46]
- rheumatoid arthritis/hypertension[44]
- psoriasis/type 2 diabetes[289]
- birth weight/type 2 diabetes[80]
- birth weight/2 hour glucose response[80]
- birth weight/fasting insulin[80]
- birth weight/Hb1Ac[80]
- difficulty sleeping/type 2 diabetes[65]
- oversleeping/type 2 diabetes[64]
- difficulty sleeping/fasting insulin[65]
- difficulty sleeping/fasting glucose[65]
- daytime sleepiness/HOMA-IR[65]
- daytime sleepiness/fasting insulin[65]
- difficulty sleeping/HOMA-IR[65]
- psoriasis/BMI[289]
- self-reported health/coronary artery disease[60]
- triglycerides/coronary artery disease[290][291][292]
- birth weight/coronary artery disease[80]
- self-reported health/ischaemic stroke[60]
- C-reactive protein/ischemic vascular disease[293]
- coronary artery disease/LDL[291][292]
- coronary artery disease/HDL[291]
- coronary artery disease/BMI[291]
- coronary artery disease/systolic blood pressure[291]
- coronary artery disease/type 1 diabetes[291]
- daytime sleepiness/coronary artery disease[65]
- difficulty sleeping/coronary artery disease[65]
- coronary artery calcification (CAC)/coronary artery disease[292]
- Lp(a)/coronary artery disease[292]
- LP-PLA2 activity/coronary artery disease[292]
- carotid plaque/coronary artery disease[292]
- vWF/coronary artery disease[292]
- FVIII/coronary artery disease[292]
- height/coronary artery disease[292]
- self-reported health/type 2 diabetes[60]
- rheumatoid arthritis/lupus[294][295]
- early puberty/type 2 diabetes[69]
- early puberty/cardiovascular disease[69]
- early puberty/polycystic ovary syndrome[69]
- age at first sex/rheumatoid arthritis[70]
- age at first sex/ulcerative colitis[70]
- age at first sex/Crohn's disease[70]
- Crohn's disease/ulcerative colitis[296][297]
- self-reported sleep duration/Crohn's disease[65]
- difficulty sleeping/Crohn's disease[65]
- age at first sex/cardiovascular disease[70]
- age at first sex/type 2 diabetes[70]
- type 2 diabetes/Dyslipidemia[46]
- type 2 diabetes/osteoarthritis[46]
- type 2 diabetes/osteoporosis[46]
- asthma/type 2 diabetes[46]
- cardiovascular disease/type 2 diabetes[46]
- esophageal adenocarcinoma/Barrett's esophagus[298]
- Intracranial aneurysms/abdominal aortic aneurysms/thoracic aortic aneurysms[299]
- Allergic rhinitis/asthma[46]
- Allergic rhinitis/hypertension[46]
- Allergic rhinitis/osteoarthritis[46]
- asthma/cardiovascular disease[46]
- asthma/Dyslipidemia[46]
- asthma/hypertension[46]
- asthma/osteoarthritis[46]
- cardiovascular disease/Dyslipidemia[46]
- cardiovascular disease/hypertension[46]
- cardiovascular disease/osteoarthritis[46]
Transfer
Trans-population
Trans-cohort
- depressive symptoms: GERA/PGC,[61] GERA/UKB,[61] UKB/PGC[61]
- neuroticism: UK Biobank (UKB) / Genetics of Personality Consortium[61]
- autism: PGC (USA)/iPSYCH (Denmark)[134]
- male/female Empathy Quotient score[195]
- male/female Systemizing Quotient-Revised (SQ-R)[195]
- male/female Eyes Test empathy score[118]
- ARIC/EHR phenotype consistencies[302]
Trans-method
- custom immunochip (iChip) SNP array/standard SNP array (comparing their estimates for the Crohn's disease/ulcerative colitis genetic correlation)[296]
- major depressive order: Psychiatric Genomics Consortium (PGC) clinical depression diagnosis/23andMe self-report depression[230]
- major depressive disorder/self-declared depression[303]
- self-reported height/clinically measured height[304]
Animal/plant
- chimpanzee cognitive performance factors[305]
- egg color in cross vs pure bred chickens[306]
- Batrachochytrium dendrobatidis infection/development time in Bufo spinosus toad[307]
- Fraxinus excelsior infection by Hymenoscyphus fraxineus: severities of crown and collar symptoms[308]
- Mimulus guttatus[309][310][311]
- Chinook salmon[312]
- various rat/cattle/sheep[313]/finch/amphipod/human/rhesus macaque[314]/pig/inland garter snake/coastal garter snake[11]
- pigs[315]
- mice [11][316][317]
- Eucalyptus melliodora foliage chemistry[318]
- male genital length/female brain size in Eastern mosquitofish[319]
- higher alcohol preference/greater fear potentiated startle in mice[320]
- biomass/yield per plant/straw yield in Paspalum scrobiculatum[321]
- sexual antagonism in Drosophila melanogaster][322]
See also
- Gene-environment correlation
- Heritability of intelligence; g factor (psychometrics)
- Cognitive epidemiology
- Lothian birth-cohort studies
- Mendelian randomization
References
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