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Maqsudul Alam

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Maqsudul Alam
Born(1954-12-14)14 December 1954
Madaripur, East Bengal, Dominion of Pakistan
Died20 December 2014(2014-12-20) (aged 60)
Hawaii, United States
Resting placeHawaii General Park, U.S.
NationalityBangladeshi-American
Alma materTemplate:Moscow University
Max Planck Institute of Biochemistry
Known forGenome sequencing of papaya, rubber, and jute
Scientific career
InstitutionsUniversity of Hawaii at Manoa

Maqsudul Alam (14 December 1954 – 20 December 2014) was a Bangladeshi-born life-science scientist [1][2] who is known for his work on genome sequencing. His work on genome sequencing started with bacteria Idiomarina loihiensis in 2003.[3] He came into the focus of Bangladeshi people after his work on genome sequencing of tosha jute (Corchorus olitorius O4) in 2010,[4] white jute (Corchorus capsularis CVL1) in 2013[5] and jute attacking fungus (Macrophomina phaseolina) in 2012.[6]

Alam also worked on genome sequencing of transgenic papaya (Carica papaya Linnaeus) in 2007,[7] rubber tree (Hevea brasiliensis) in 2009,[8] bacteria Methylacidiphilum infernorum in 2007,[9] Methylocella silvestris BL2 in 2009,[10] Saprospira grandis str. Lewin in 2011,[11] Geobacillus thermoleovorans CCB_US3_UF5 in 2011,[12] Thermus sp. strain CCB_US3_UF1 in 2011,[13][14] Salmonella enterica subsp. enterica Serovar Typhi P-stx-12 in 2011,[15] Thermomyces lanuginosus Strain SSBP[16] and Pantoea anthophila in 2014.[17]

Early life

Alam was born in Madaripur, Bangladesh. His parents were Dalil Uddin Ahmed, a martyr of the 1971 Liberation War and an official of East Pakistan Rifles; and Lyrian Ahmed, a teacher, and social worker.[1]

Personal life

Alam married Irina Anatolievna during his stay in Russia. Alam was a Ph.D student and Anatolievna was a medical student at that time. The couple had one daughter named Liliana Maqsudulovna Alam (born 1986). In 1992, the family moved to United States. The couple was divorced in 1997.[18]

File:Maqsudul and Liliana.jpg
Maqsudul with his daughter Liliana

Alam later married Rafia Hasina in 2009.

Education

Alam completed secondary and higher secondary education from Government Laboratory High School and Dhaka College, respectively. He completed his Master’s in Microbiology from Moscow State University in 1979; and earned his first Ph.D degree in Microbiology from the same university in 1982. He earned his second Ph.D in Biochemistry from Max Planck Institute of Biochemistry in 1987.[1][2]

Academic career

From 1988-1990, Alam was a senior research scientist at Institute of Bioorganic Chemistry of Russian Academy of Sciences. Then he was a visiting scientist of department of Biochemistry and Biophysics at Washington State University from 1990-1992. Alam was an assistant director of Marine Bioproducts Engineering Center (MarBEC) at University of Hawaii.

In 1992, Alam joined the department of Microbiology at University of Hawaii, Manoa as an assistant professor. In 1997, he was promoted to associate professor. Alam became full professor in 2001, a position which he held until his death. He was also the Director of Advanced Studies in Genomics, Proteomics and Bioinformatics at University of Hawaii, Manoa from 2003 to until his death.[1][2]

Alam was the director of Centre for Chemical Biology at Universiti Sains Malaysia from 2009-2012.[2] In 2011, Alam became a member of advisory board at Shahjalal University of Science and Technology (SUST), Sylhet.

File:Alam SUST Shahid Minar.jpg
Alam (upper row, 6th from right), Muhammed Zafar Iqbal, Yeasmin Haque and other teachers at SUST Shahid Minar, Sylhet.

Scientific career

Idiomarina loihiensis Genome Project

In 2003, Alam set up the Advanced Studies in Genomics, Proteomics and Bioinformatics (ASGPB) keeping in mind the end goal to give a common asset to these developing fields at University of Hawaii at Manoa. Consolidating the DNA sequencing framework of ASGPB with the bioinformatic assets at the Maui High Performance Computing Center (MHPCC), he ran a Computational Proteomics program that secured the range of wet lab research to in silico informatics.[2]

Alam and his team completed the genome sequencing of Idiomarina loihiensis,[3] an ancient organism found in the hydrothermal vents of Loihi during a University of Hawaii expedition in 2003.[19]

Hawaii Papaya Genome Project

In 2007, Alam worked in the Hawaii Papaya Genome Project which aimed to sequence complete genome of the transgenic 'SunUp' papaya. The SunUp papaya was genetically modified to confer resistance to the Papaya ringspot virus. But Hawaii farmers could not sell the transgenic papaya in Japan, so Alam and his team sequenced the transgenic papaya to help the farmers get through the regulatory process.[20][7]

Patents while at University of Hawaii at Manoa

  • Heme proteins hemAT-Hs and hemAT-Bs and their use in medicine and microsensors. US Patent No. 7,129,329. 31 Oct. 2006[21]

Malaysia Rubber Tree Genome Project

After papaya Alam went to set up the Center for Chemical Biology at Universiti Sains Malaysia in 2009. There he established research facilities, research programs, and worked on genome sequencing of rubber tree (Hevea brasiliensis).[8]

Patents while at University Sains Malaysia

  • RECOMBINANT ALPHA AMYLASE AND THE PRODUCTION THEREOF. MY165644. 2018 (filed 2012)[22]
  • A METHOD OF REGULATING LIGNIN CONTENT IN THE PLANT OF HEVEA BRASILIENSIS. MY165254. 2018 (2012)[23]
  • CIS-PRENYL TRANSFERASE FROM THE PLANT HEVEA BRASILIENSIS. MY160195. 2017 (filed 2012)[24]
  • A METHOD FOR REGULATING THE BIOSYNTHESIS, CONVERSION AND UTILIZATION OF PRENYL-PYROPHOSPHATES IN HEVEA BRASILIENSIS WO2013051925. 2013 (filed 2012)[25]
  • A METHOD FOR REGULATING CYTOSOLIC ISOPRENOID BIOSYNTHESIS IN HEVEA BRASILIENSIS. WO2013039378. 2013. (filed 2012)[26]
  • RUBBER ALLERGENIC PROTEINS AND IMMUNOASSAY DERIVED THEREOF. WO2013036101. 2013 (filed 2012)[27]
  • A METHOD FOR REGULATING PLASTIDIAL ISOPRENOID BIOSYNTHESIS IN HEVEA BRASILIENSIS. WO2013036100. 2013 (filed 2012)[28]
  • A METHOD OF REGULATING MONOLIGNOLS POLYMERIZATION ON CELL WALLS OF THE PLANT HEVEA BRASILIENSIS AND A TRANSGENIC PLANT ACQUIRED THEREOF. WO2012161564. 2012[29]
  • A METHOD OF MANIPULATING LIGNIN CONTENT IN PLANTS. WO2012161563. 2012[30]
  • A METHOD FOR REGULATING BIOSYNTHESIS OF MONOLIGNOLS. WO2012158016. 2012.[31]
  • UNDECAPRENYL PYROPHOSPHATE SYNTHASE FROM THE PLANT HEVEA BRASILIENSIS. WO2012148253 2012[32]

Bangladesh Jute Genome Project

File:PM and Alam.jpg
Prime Minister Sheikh Hasina and Alam (2nd from right) in a press conference (2010) announcing completion of jute genome sequencing.

Alam wanted to do something important for his motherland. He hoped genome sequencing of a cash crop like jute would help Bangladesh economically because jute can be made disease resistant if the genome sequence is known. So in 2009, Alam joined the Basic and Applied Research on Jute Project of Jute Research Institute, Bangladesh, as principal investigator. His team worked on genome sequencing of tossa jute (Corchorus olitorius O4)[4] in 2010, a jute attacking fungus (Macrophomina phaseolina)[6] in 2012 and white jute (Corchorus capsularis CVL1)[5] in 2013.[1] In 2010, Prime Minister Sheikh Hasina publicly announced that jute genome had been decoded and several patent application would be filed.[33][34] Multiple patent applications were filed and earned from the jute project of Bangladesh.

Bangladesh Jute Genome Project Patents

  • Nucleic acid molecules encoding enzymes that confer disease resistance in jute. US Patent No. 9,873,890. 23 Jan. 2018 (filed 2012).[35]
  • Nucleic acid molecules encoding enzymes that confer disease resistance in jute. MY164626. 2018 (filed 2012)[36]
  • LIGNIN DEGRADING ENZYMES FROM MACROPHOMINA PHASEOLINA AND USES THEREOF. PT2885404. 2018 (filed 2013)[37]
  • Pectin degrading enzymes from Macrophomina phaseolina and uses thereof. US Patent No. 9,765,322. 19 Sep. 2017 (filed 2013).[38]
  • Pectin degrading enzymes from Macrophomina phaseolina and uses thereof. EP20130829902. Pending (filed 2013).[39]
  • Pectin degrading enzymes from Macrophomina phaseolina and uses thereof. WO 2014028772 A2. 20 Feb. 2014 (filed 2013).[40]
  • Pectin degrading enzymes from Macrophomina phaseolina and uses thereof. ZA201501635. 2016 (filed 2013)[41]
  • Cellulose and/or hemicelluloses degrading enzymes from Macrophomina phaseolina and uses thereof. US Patent No. 9,765,315. 19 Sep. 2017 (filed 2013).[42]
  • Cellulose and/or hemicelluloses degrading enzymes from Macrophomina phaseolina and uses thereof. ZA201501632. 2015 (filed 2013).[43]
  • Polynucleotides encoding enzymes from the jute lignin biosynthetic pathway. US Patent No. 9,683,241. 20 Jun. 2017 (filed 2012).[44]
  • Polynucleotides encoding enzymes from the jute lignin biosynthetic pathway. PT2701487. 2017 (filed 2012)[45]
  • Nucleotide Sequence Encoding Wuschel-Related Homeobox4 (WOX4) Protein From Corchorus Olitorius and Corchorus Capsularis and Methods of Use For Same. DK2922961. 2018 (filed 2014)[46]
  • Nucleotide Sequence Encoding Wuschel-Related Homeobox4 (WOX4) Protein From Corchorus Olitorius and Corchorus Capsularis and Methods of Use For Same. US Patent Application No. 14/781,169 (filed 2014).[47]
  • NUCLEOTIDE SEQUENCE ENCODING HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 (HD-ZIP PROTEIN 22) FROM CORCHORUS OLITORIUS AND CORCHORUS CAPSULARIS AND METHODS OF USE - HAT22 (HD-ZIP 22). HK1218426 (A1). 2017 (filed 2014)[48]
  • Nucleotide Sequence Encoding Homeobox-Leucine Zipper Protein HAT22 (HD-ZIP Protein 22) From Corchorus Olitorius and Corchorus Capsularis and Methods of Use. US Patent Application No. 14/781,243 (filed 2014).[49]

Death

On December 20, 2014 Alam died at the Queen’s medical center, Honolulu, Hawaii. He was suffering from cirrhosis of the liver. On December 23, 2014 he was buried at Hawaii Memorial Park Cemetery as per his desire.[50][51]

Awards

Alam was awarded excellence of research award from University of Hawaii in 2001, NIH Shannon Award in 1997, Humboldt Research Fellow in 1987 from German Science Foundation.[1] In 2016, Alam was awarded Independence Day Award posthumously by the Government of Bangladesh.[52]

Legacy

"Maqsudul Alam Graduate Research Award Fund" was setup by University of Hawaii Foundation to support the education of graduate students.[2]

Publications

Alam wrote many articles in books and journals, which are listed below.

Book Chapters

  • Synteny and Collinearity in Plant Genomes (2008).[53]
  • Protoglobin and globin-coupled sensors (2008).[54]

Journal articles

  • Draft genome sequence of the rubber tree Hevea brasiliensis (2013)[8]
  • Complete Genome Sequence of the Thermophilic Bacterium Geobacillus thermoleovorans CCB_US3_UF5 (2012)[12]
  • Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium (2012)[11]
  • Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution (2012)[55]
  • Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella silvestris BL2 (2010)[10]
  • An oxygen-sensing diguanylate cyclase and phosphodiesterase couple for c-di-GMP control (2009)[56]
  • The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) (2008)[7]
  • Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps. (2008)[57]
  • Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia (2008) [9]
  • Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand (2008)[58]
  • Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids (2008)[59]
  • Construction of a sequence-tagged high-density genetic map of papaya for comparative structural and evolutionary genomics in brassicales (2007)[60]
  • Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia (2007)[61]
  • Aerotactic responses in bacteria to photoreleased oxygen (2002)[62]
  • Genome sequence of Halobacteriumspecies NRC-1 (2000)[63]
  • Myoglobin-like aerotaxis transducers in Archaea and Bacteria. (2000)[64]
  • Die Geißelbewegung halophiler Bakterien (1987)[65]

References

  1. ^ a b c d e f "About Professor Maqsudul Alam". Basic & Applied Research on Jute Project (BARJ), Bangladsh. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  2. ^ a b c d e f "MAQSUDUL ALAM GRADUATE RESEARCH AWARD FUND". UNIVERSITY OF HAWAI‘I FOUNDATION. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  3. ^ a b Hou, Shaobin; Saw, Jimmy H.; Lee, Kit Shan; Freitas, Tracey A.; Belisle, Claude; Kawarabayasi, Yutaka; Donachie, Stuart P.; Pikina, Alla; Galperin, Michael Y. (2004-12-28). "Genome sequence of the deep-sea γ-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy". Proceedings of the National Academy of Sciences. 101 (52): 18036–18041. Bibcode:2004PNAS..10118036H. doi:10.1073/pnas.0407638102. PMC 539801. PMID 15596722.
  4. ^ a b "Jute genome decoded". The Daily Star. June 17, 2010. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  5. ^ a b "Maqsudul Alam declares Genome Sequence of Deshi Jute". Somoy TV News. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  6. ^ a b Islam, Md Shahidul; Haque, Md Samiul; Islam, Mohammad Moinul; Emdad, Emdadul Mannan; Halim, Abdul; Hossen, Quazi Md Mosaddeque; Hossain, Md Zakir; Ahmed, Borhan; Rahim, Sifatur (2012-09-19). "Tools to kill: Genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina". BMC Genomics. 13 (1): 493. doi:10.1186/1471-2164-13-493. ISSN 1471-2164. PMC 3477038. PMID 22992219.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  7. ^ a b c Ming, Ray; Hou, Shaobin; Feng, Yun; Yu, Qingyi; Dionne-Laporte, Alexandre; Saw, Jimmy H.; Senin, Pavel; Wang, Wei; Ly, Benjamin V. (April 2008). "The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)". Nature. 452 (7190): 991–996. Bibcode:2008Natur.452..991M. doi:10.1038/nature06856. ISSN 0028-0836. PMC 2836516. PMID 18432245.
  8. ^ a b c Rahman, Ahmad Yamin Abdul; Usharraj, Abhilash O.; Misra, Biswapriya B.; Thottathil, Gincy P.; Jayasekaran, Kandakumar; Feng, Yun; Hou, Shaobin; Ong, Su Yean; Ng, Fui Ling (2013-02-02). "Draft genome sequence of the rubber tree Hevea brasiliensis". BMC Genomics. 14 (1): 75. doi:10.1186/1471-2164-14-75. ISSN 1471-2164. PMC 3575267. PMID 23375136.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  9. ^ a b Hou, Shaobin; Makarova, Kira S.; Saw, Jimmy HW; Senin, Pavel; Ly, Benjamin V.; Zhou, Zhemin; Ren, Yan; Wang, Jianmei; Galperin, Michael Y. (2008-07-01). "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia". Biology Direct. 3 (1): 26. doi:10.1186/1745-6150-3-26. ISSN 1745-6150. PMC 2474590. PMID 18593465.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  10. ^ a b Chen, Yin; Crombie, Andrew; Rahman, M. Tanvir; Dedysh, Svetlana N.; Liesack, Werner; Stott, Matthew B.; Alam, Maqsudul; Theisen, Andreas R.; Murrell, J. Colin (2010-07-15). "Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella silvestris BL2". Journal of Bacteriology. 192 (14): 3840–3841. doi:10.1128/JB.00506-10. ISSN 0021-9193. PMC 2897342. PMID 20472789.
  11. ^ a b Saw, Jimmy H. W.; Yuryev, Anton; Kanbe, Masaomi; Hou, Shaobin; Young, Aaron G.; Aizawa, Shin-Ichi; Alam, Maqsudul (2012-03-19). "Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium". Standards in Genomic Sciences. 6 (1): 84–93. doi:10.4056/sigs.2445005. ISSN 1944-3277. PMC 3368406. PMID 22675601.
  12. ^ a b Sakaff, Muhd Khairul Luqman Muhd; Rahman, Ahmad Yamin Abdul; Saito, Jennifer A.; Hou, Shaobin; Alam, Maqsudul (2012-03-01). "Complete Genome Sequence of the Thermophilic Bacterium Geobacillus thermoleovorans CCB_US3_UF5". Journal of Bacteriology. 194 (5): 1239. doi:10.1128/JB.06580-11. ISSN 0021-9193. PMC 3294819. PMID 22328744.
  13. ^ Teh, Beng Soon; Rahman, Ahmad Yamin Abdul; Saito, Jennifer A.; Hou, Shaobin; Alam, Maqsudul (2012-03-01). "Complete Genome Sequence of the Thermophilic Bacterium Thermus sp. Strain CCB_US3_UF1". Journal of Bacteriology. 194 (5): 1240. doi:10.1128/JB.06589-11. ISSN 0021-9193. PMC 3294796. PMID 22328745.
  14. ^ Teh, Beng Soon; Lau, Nyok-Sean; Ng, Fui Ling; Abdul Rahman, Ahmad Yamin; Wan, Xuehua; Saito, Jennifer A.; Hou, Shaobin; Teh, Aik-Hong; Najimudin, Nazalan (2015-10-08). "Complete genome sequence of the thermophilic Thermus sp. CCB_US3_UF1 from a hot spring in Malaysia". Standards in Genomic Sciences. 10 (1): 76. doi:10.1186/s40793-015-0053-6. ISSN 1944-3277. PMC 4599208. PMID 26457128.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  15. ^ Ong, Su Yean; Pratap, Chandra Bhan; Wan, Xuehua; Hou, Shaobin; Rahman, Ahmad Yamin Abdul; Saito, Jennifer A.; Nath, Gopal; Alam, Maqsudul (2012-04-15). "Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhi P-stx-12". Journal of Bacteriology. 194 (8): 2115–2116. doi:10.1128/JB.00121-12. ISSN 0021-9193. PMC 3318496. PMID 22461552.
  16. ^ Mchunu, Nokuthula Peace; Permaul, Kugen; Rahman, Ahmad Yamin Abdul; Saito, Jennifer A.; Singh, Suren; Alam, Maqsudul (2013-06-27). "Xylanase Superproducer: Genome Sequence of a Compost-Loving Thermophilic Fungus, Thermomyces lanuginosus Strain SSBP". Genome Announcements. 1 (3): e00388–13. doi:10.1128/genomeA.00388-13. ISSN 2169-8287. PMC 3707600. PMID 23788551.
  17. ^ Wan, Xuehua; Hou, Shaobin; Phan, Nolwenn; Moss, Jennifer S. Malone; Donachie, Stuart P.; Alam, Maqsudul (2015-06-25). "Draft Genome Sequence of Pantoea anthophila Strain 11-2 from Hypersaline Lake Laysan, Hawaii". Genome Announcements. 3 (3): e00321–15. doi:10.1128/genomeA.00321-15. ISSN 2169-8287. PMC 4432323. PMID 25977417.
  18. ^ "Biography-Liliana". Google Sites. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  19. ^ "Small UH gene team achieves big-time feat". Star bulletin. 2003.
  20. ^ Borrell, Brendan (2008-04-23). "Papaya genome project bears fruit". Nature. doi:10.1038/news.2008.772. ISSN 0028-0836.
  21. ^ Heme proteins hemAT-Hs and hemAT-Bs and their use in medicine and microsensors, 1999-12-06, retrieved 2018-06-20
  22. ^ "Bibliographic data: MY165644 (A) ― 2018-04-18". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  23. ^ "Bibliographic data: MY165254 (A) ― 2018-03-14". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  24. ^ "Bibliographic data: MY160195 (A) ― 2017-02-28". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  25. ^ "Bibliographic data: WO2013051925 (A1) ― 2013-04-11". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  26. ^ "Bibliographic data: WO2013039378 (A1) ― 2013-03-21". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  27. ^ "Bibliographic data: WO2013036101 (A1) ― 2013-03-14". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  28. ^ "Bibliographic data: WO2013036100 (A1) ― 2013-03-14". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  29. ^ "Bibliographic data: WO2012161564 (A1) ― 2012-11-29". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  30. ^ "Bibliographic data: WO2012161563 (A1) ― 2012-11-29". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  31. ^ "Bibliographic data: WO2012158016 (A1) ― 2012-11-22". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  32. ^ "Bibliographic data: WO2012148253 (A1) ― 2012-11-01". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  33. ^ "Jute Genome Sequence Unveiled". Bangladesh Awami League. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  34. ^ "Jute genome sequence decoded by Bangladeshi scientists". Hindustan Times.
  35. ^ Nucleic acid molecules encoding enzymes that confer disease resistance in jute, 2012-06-08, retrieved 2018-06-20
  36. ^ "Bibliographic data: MY164626 (A) ― 2018-01-18". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  37. ^ "Bibliographic data: PT2885404 (T) ― 2018-05-17". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  38. ^ Pectin degrading enzymes from macrophomina phaseolina and uses thereof, 2013-08-15, retrieved 2018-06-20
  39. ^ Pectin degrading enzymes from macrophomina phaseolina and uses thereof, 2013-08-15, retrieved 2018-06-26
  40. ^ "Patent WO2014028772A2 - Pectin degrading enzymes from macrophomina phaseolina and uses thereof". Google Books. Maqsudul Alam, Mohammed Shahidul ISLAM, Mohammed Mosaddeque HOSSEN, Mohammed Samiul HAQUE, Mohammed Monjurul ALAM, Bangladesh Jute Research Institute. 2013-08-15.{{cite journal}}: CS1 maint: others (link)
  41. ^ "Bibliographic data: ZA201501635 (B) ― 2016-01-27". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  42. ^ Cellulose and/or hemicelluloses degrading enzymes from Macrophomina phaseolina and uses thereof, 2013-08-15, retrieved 2018-06-20
  43. ^ "Bibliographic data: ZA201501632 (B) ― 2015-12-23". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  44. ^ Polynucleotides encoding enzymes from the jute lignin biosynthetic pathway, 2012-04-25, retrieved 2018-06-20
  45. ^ "Bibliographic data: PT2701487 (T) ― 2017-11-14". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  46. ^ "Bibliographic data: DK2922961 (T3) ― 2018-06-14". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  47. ^ Nucleotide Sequence Encoding Wuschel-Related Homeobox4 (WOX4) Protein from Corchorus Olitorius and Corchorus Capsularis and Methods of Use for Same, 2014-11-20, retrieved 2018-06-20
  48. ^ "Bibliographic data: HK1218426 (A1) ― 2017-02-17". worldwide.espacenet.com. Retrieved 2018-06-26. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  49. ^ Nucleotide Sequence Encoding Homeobox-Leucine Zipper Protein HAT22 (HD-ZIP Protein 22) from Corchorus Olitorius and Corchorus Capsularis and Methods of Use, 2014-11-21, retrieved 2018-06-20
  50. ^ "Scientist Maqsudul Alam passes away". Prothom-Alo. December 21, 2014. {{cite web}}: Cite has empty unknown parameter: |dead-url= (help)
  51. ^ "Jute genome decoder Maqsudul Alam passes away". Daily Star. Dec 20, 2014. Retrieved December 21, 2014.
  52. ^ "Independence Day Award" (PDF). Government of Bangladesh. Retrieved 23 September 2016.
  53. ^ Tang, Haibao; Bowers, John E.; Wang, Xiyin; Ming, Ray; Alam, Maqsudul; Paterson, Andrew H. (2008-04-25). "Synteny and Collinearity in Plant Genomes". Science. 320 (5875): 486–488. Bibcode:2008Sci...320..486T. doi:10.1126/science.1153917. ISSN 0036-8075. PMID 18436778.
  54. ^ Freitas, Tracey Allen K.; Saito, Jennifer A.; Wan, Xuehua; Hou, Shaobin; Alam, Maqsudul (2008), "Protoglobin and Globin-coupled Sensors", The Smallest Biomolecules: Diatomics and their Interactions with Heme Proteins, Elsevier, pp. 175–202, doi:10.1016/b978-044452839-1.50008-5, ISBN 9780444528391, retrieved 2018-06-26
  55. ^ Wang, Jianping; Na, Jong-Kuk; Yu, Qingyi; Gschwend, Andrea R.; Han, Jennifer; Zeng, Fanchang; Aryal, Rishi; VanBuren, Robert; Murray, Jan E. (2012-08-21). "Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution". Proceedings of the National Academy of Sciences. 109 (34): 13710–13715. Bibcode:2012PNAS..10913710W. doi:10.1073/pnas.1207833109. ISSN 0027-8424. PMC 3427123. PMID 22869747.
  56. ^ Tuckerman, Jason R.; Gonzalez, Gonzalo; Sousa, Eduardo H. S.; Wan, Xuehua; Saito, Jennifer A.; Alam, Maqsudul; Gilles-Gonzalez, Marie-Alda (2009-10-20). "An Oxygen-Sensing Diguanylate Cyclase and Phosphodiesterase Couple for c-di-GMP Control". Biochemistry. 48 (41): 9764–9774. doi:10.1021/bi901409g. ISSN 0006-2960. PMID 19764732.
  57. ^ Tang, Haibao; Wang, Xiyin; Bowers, John E.; Ming, Ray; Alam, Maqsudul; Paterson, Andrew H. (2008-12-01). "Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps". Genome Research. 18 (12): 1944–1954. doi:10.1101/gr.080978.108. ISSN 1088-9051. PMC 2593578. PMID 18832442.
  58. ^ Stott, Matthew B.; Crowe, Michelle A.; Mountain, Bruce W.; Smirnova, Angela V.; Hou, Shaobin; Alam, Maqsudul; Dunfield, Peter F. (August 2008). "Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand". Environmental Microbiology. 10 (8): 2030–2041. doi:10.1111/j.1462-2920.2008.01621.x. ISSN 1462-2912. PMID 18422642.
  59. ^ Lyons, Eric; Pedersen, Brent; Kane, Josh; Alam, Maqsudul; Ming, Ray; Tang, Haibao; Wang, Xiyin; Bowers, John; Paterson, Andrew (2008-12-01). "Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids". Plant Physiology. 148 (4): 1772–1781. doi:10.1104/pp.108.124867. ISSN 0032-0889. PMC 2593677. PMID 18952863.
  60. ^ Chen, Cuixia; Yu, Qingyi; Hou, Shaobin; Li, Yingjun; Eustice, Moriah; Skelton, Rachel L.; Veatch, Olivia; Herdes, Rachel E.; Diebold, Lauren (2007-12-01). Construction of a Sequence-Tagged High-Density Genetic Map of Papaya for Comparative Structural and Evolutionary Genomics in Brassicales. Vol. 177. pp. 2481–2491. Bibcode:2001gpm..book.....L. doi:10.1534/genetics.107.081463. ISSN 0016-6731. PMC 2219497. PMID 17947401. {{cite book}}: |journal= ignored (help)
  61. ^ Dunfield, Peter F.; Yuryev, Anton; Senin, Pavel; Smirnova, Angela V.; Stott, Matthew B.; Hou, Shaobin; Ly, Binh; Saw, Jimmy H.; Zhou, Zhemin (2007-11-14). "Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia". Nature. 450 (7171): 879–882. Bibcode:2007Natur.450..879D. doi:10.1038/nature06411. ISSN 0028-0836. PMID 18004300.
  62. ^ Yu, Hyung Suk; Saw, Jimmy H.; Hou, Shaobin; Larsen, Randy W.; Watts, Kylie J.; Johnson, Mark S.; Zimmer, Michael A.; Ordal, George W.; Taylor, Barry L. (2002-12-01). "Aerotactic responses in bacteria to photoreleased oxygen". FEMS Microbiology Letters. 217 (2): 237–242. doi:10.1111/j.1574-6968.2002.tb11481.x. ISSN 0378-1097.
  63. ^ Ng, Wailap Victor; Kennedy, Sean P.; Mahairas, Gregory G.; Berquist, Brian; Pan, Min; Shukla, Hem Dutt; Lasky, Stephen R.; Baliga, Nitin S.; Thorsson, Vesteinn (2000-10-24). "Genome sequence of Halobacterium species NRC-1". Proceedings of the National Academy of Sciences. 97 (22): 12176–12181. Bibcode:2000PNAS...9712176N. doi:10.1073/pnas.190337797. PMC 17314. PMID 11016950.
  64. ^ Hou, Shaobin; Larsen, Randy W.; Boudko, Dmitri; Riley, Charles W.; Karatan, Ece; Zimmer, Mike; Ordal, George W.; Alam, Maqsudul (February 2000). "Myoglobin-like aerotaxis transducers in Archaea and Bacteria". Nature. 403 (6769): 540–544. Bibcode:2000Natur.403..540H. doi:10.1038/35000570. ISSN 0028-0836. PMID 10676961.
  65. ^ Marwan, Wolfgang; Alam, Maqsudul; Oesterhelt, Dieter (1987). "Die Geißelbewegung halophiler Bakterien". Naturwissenschaften (in German). 74 (12): 585–590. Bibcode:1987NW.....74..585M. doi:10.1007/bf00368516. ISSN 0028-1042.

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