OTUB1

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OTUB1
Available structures
PDB Human UniProt search: PDBe RCSB
Identifiers
Aliases OTUB1, OTB1, OTU1, HSPC263, OTU deubiquitinase, ubiquitin aldehyde binding 1
External IDs HomoloGene: 134542 GeneCards: OTUB1
RNA expression pattern
PBB GE OTUB1 38710 at fs.png

PBB GE OTUB1 201246 s at fs.png

PBB GE OTUB1 201245 s at fs.png
More reference expression data
Orthologs
Species Human Mouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_017670

n/a

RefSeq (protein)

NP_060140

n/a

Location (UCSC) Chr 11: 63.99 – 64 Mb n/a
PubMed search [1] n/a
Wikidata
View/Edit Human

Ubiquitin thioesterase OTUB1 also known as otubain-1 is an enzyme that in humans is encoded by the OTUB1 gene.[2][3] Alternative splicing results in multiple transcript variants.

Function[edit]

Otubain-1 is a member of the OTU (ovarian tumor) superfamily of predicted cysteine proteases. The encoded protein is a highly specific ubiquitin iso-peptidase, and cleaves ubiquitin from branched poly-ubiquitin chains, being specific for lysine48 -linked polyubiquitin but not lysine63 -linked polyubiquitin.[4] It interacts with another ubiquitin protease and an E3 ubiquitin ligase that inhibits cytokine gene transcription in the immune system. It is proposed to function in specific ubiquitin-dependent pathways, possibly by providing an editing function for polyubiquitin chain growth.[3]

Interactions[edit]

OTUB1 has been shown to interact with RNF128[5] and GNB2L1.[4]

References[edit]

  1. ^ "Human PubMed Reference:". 
  2. ^ Balakirev MY, Tcherniuk SO, Jaquinod M, Chroboczek J (Apr 2003). "Otubains: a new family of cysteine proteases in the ubiquitin pathway". EMBO Rep. 4 (5): 517–22. doi:10.1038/sj.embor.embor824. PMC 1319179Freely accessible. PMID 12704427. 
  3. ^ a b "Entrez Gene: OTUB1 OTU domain, ubiquitin aldehyde binding 1". 
  4. ^ a b Edelmann MJ, Iphöfer A, Akutsu M, Altun M, di Gleria K, Kramer HB, Fiebiger E, Dhe-Paganon S, Kessler BM (March 2009). "Structural basis and specificity of human otubain 1-mediated deubiquitination". Biochem. J. 418 (2): 379–90. doi:10.1042/BJ20081318. PMID 18954305. 
  5. ^ Soares L, Seroogy C, Skrenta H, Anandasabapathy N, Lovelace P, Chung CD, Engleman E, Fathman CG (January 2004). "Two isoforms of otubain 1 regulate T cell anergy via GRAIL". Nat. Immunol. 5 (1): 45–54. doi:10.1038/ni1017. PMID 14661020. 

Further reading[edit]