Haplogroup D-Z27276: Difference between revisions

Haplogroup D-Z27276
Haplogroup D-Z27276
Possible time of origin	30,000-40,000YBP
Possible place of origin	East Asia
Ancestor	（Grandparent）D
Descendants	D-M15, D-P99
Defining mutations	Z27276, Z27283, Z29263
Highest frequencies	Tibetans

Browse history interactively

← Previous edit Next edit →

Content deleted Content added

VisualWikitext

Inline

Revision as of 15:38, 2 September 2019

Haplogroup D-Z27276 also known as Haplogroup D1a1 is a Y-chromosome haplogroup. It is one of two branches of Haplogroup D1, one of the descendants of Haplogroup D. The other is D-M55 which is only found in Japan.

This group is found in about 49% Tibetan people^[2]. It branched off D-M55 35,000-40,000 years before present or already 53,000 years before present.^[1]^[3]

Phylogenetic tree

By ISOGG tree（Version: 14.151）^[4].

DE (YAP)
- D (CTS3946)
  - D1 (M174/Page30, IMS-JST021355)
    - D1a (CTS11577)　
      - D1a1 (F6251/Z27276)
        D1a1a (M15)　Tibet
        
        D1a1b (P99)　Tibet, Mongol, Central Asia
      - D1a2 (M64.1/Page44.1, M55) 　 Japan（Yamato people、Ryukyuan people、Ainu people）
      - D1a3 (Y34637)　Andaman Islands（Onge people, Jarawa people）^[5]^[6]
    - D1b (L1378) 　 Philipines^[7]
  - D2 (A5580.2) 　Nigeria, Saudi Arabia, Syria^[8]^[9]

References

^ ^a ^b Shi, Hong; Zhong, Hua; Peng, Yi; Dong, Yong-li; Qi, Xue-bin; Zhang, Feng; Liu, Lu-Fang; Tan, Si-jie; Ma, Runlin Z; Xiao, Chun-Jie; Wells, R Spencer; Jin, Li; Su, Bing (October 29, 2008). "Y chromosome evidence of earliest modern human settlement in East Asia and multiple origins of Tibetan and Japanese populations". BMC Biology. 6. BioMed Central: 45. doi:10.1186/1741-7007-6-45. PMC 2605740. PMID 18959782. Retrieved November 21, 2010.{{cite journal}}: CS1 maint: unflagged free DOI (link)
^ Michael F Hammer; Tatiana M Karafet; Hwayong Park; Keiichi Omoto; Shinji Harihara; Mark Stoneking; Satoshi Horai (2006). "Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes". Journal of Human Genetics. 51 (1): 47–58. doi:10.1007/s10038-005-0322-0. PMID 16328082.
^ Mondal, Mayukh & Bergström, Anders & Xue, Yali & Calafell, Francesc & Laayouni, Hafid & Casals, Ferran & Majumder, Partha & Tyler-Smith, Chris & Bertranpetit, Jaume. (2017). Y-chromosomal sequences of diverse Indian populations and the ancestry of the Andamanese. Human Genetics. 136. 10.1007/s00439-017-1800-0.
^ [1]
^ Thangaraj K, Singh L, Reddy AG, Rao VR, Sehgal SC, Underhill PA, Pierson M, Frame IG, Hagelberg E (January 2003). "Genetic affinities of the Andaman Islanders, a vanishing human population". Current Biology. 13 (2): 86–93. doi:10.1016/S0960-9822(02)01336-2. PMID 12546781.
^ Y-Full
^ Y-DNA Haplogroup D and its Subclades - 2014
^ Tyler-Smith, Chris; Xue, Yali; Thomas, Mark G.; Yang, Huanming; Arciero, Elena; Asan; Connell, Bruce A.; Jones, Abigail L.; Haber, Marc (2019-06-13). "A Rare Deep-Rooting D0 African Y-Chromosomal Haplogroup and Its Implications for the Expansion of Modern Humans out of Africa". Genetics: genetics.302368.2019. doi:10.1534/genetics.119.302368. ISSN 0016-6731. PMID 31196864.
^ Estes, Roberta (2019-06-21). "Exciting New Y DNA Haplogroup D Discoveries!". DNAeXplained - Genetic Genealogy. Retrieved 2019-07-08.

This bioinformatics-related article is a stub. You can help Wikipedia by expanding it.

This genetics article is a stub. You can help Wikipedia by expanding it.

[shi-1] Shi, Hong; Zhong, Hua; Peng, Yi; Dong, Yong-li; Qi, Xue-bin; Zhang, Feng; Liu, Lu-Fang; Tan, Si-jie; Ma, Runlin Z; Xiao, Chun-Jie; Wells, R Spencer; Jin, Li; Su, Bing (October 29, 2008). "Y chromosome evidence of earliest modern human settlement in East Asia and multiple origins of Tibetan and Japanese populations". BMC Biology. 6. BioMed Central: 45. doi:10.1186/1741-7007-6-45. PMC 2605740. PMID 18959782. Retrieved November 21, 2010.{{cite journal}}: CS1 maint: unflagged free DOI (link)

[Hammer2006-2] Michael F Hammer; Tatiana M Karafet; Hwayong Park; Keiichi Omoto; Shinji Harihara; Mark Stoneking; Satoshi Horai (2006). "Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes". Journal of Human Genetics. 51 (1): 47–58. doi:10.1007/s10038-005-0322-0. PMID 16328082.

[3] Mondal, Mayukh & Bergström, Anders & Xue, Yali & Calafell, Francesc & Laayouni, Hafid & Casals, Ferran & Majumder, Partha & Tyler-Smith, Chris & Bertranpetit, Jaume. (2017). Y-chromosomal sequences of diverse Indian populations and the ancestry of the Andamanese. Human Genetics. 136. 10.1007/s00439-017-1800-0.

[4] [1]

[pmid12546781-5] Thangaraj K, Singh L, Reddy AG, Rao VR, Sehgal SC, Underhill PA, Pierson M, Frame IG, Hagelberg E (January 2003). "Genetic affinities of the Andaman Islanders, a vanishing human population". Current Biology. 13 (2): 86–93. doi:10.1016/S0960-9822(02)01336-2. PMID 12546781.

[6] Y-Full

[ISOGG2014-7] Y-DNA Haplogroup D and its Subclades - 2014

[8] Tyler-Smith, Chris; Xue, Yali; Thomas, Mark G.; Yang, Huanming; Arciero, Elena; Asan; Connell, Bruce A.; Jones, Abigail L.; Haber, Marc (2019-06-13). "A Rare Deep-Rooting D0 African Y-Chromosomal Haplogroup and Its Implications for the Expansion of Modern Humans out of Africa". Genetics: genetics.302368.2019. doi:10.1534/genetics.119.302368. ISSN 0016-6731. PMID 31196864.

[9] Estes, Roberta (2019-06-21). "Exciting New Y DNA Haplogroup D Discoveries!". DNAeXplained - Genetic Genealogy. Retrieved 2019-07-08.

[vanOven2014-10] Van Oven M, Van Geystelen A, Kayser M, Decorte R, Larmuseau HD (2014). "Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome". Human Mutation. 35 (2): 187–91. doi:10.1002/humu.22468. PMID 24166809. S2CID 23291764.

[ISOGG2015-11] International Society of Genetic Genealogy (ISOGG; 2015), Y-DNA Haplogroup Tree 2015. (Access date: 1 February 2015.)

[A0-T-12] Haplogroup A0-T is also known as A-L1085 (and previously as A0'1'2'3'4).

[A1-13] Haplogroup A1 is also known as A1'2'3'4.

[LT-14] Haplogroup LT (L298/P326) is also known as Haplogroup K1.

[K2-15] Between 2002 and 2008, Haplogroup T-M184 was known as "Haplogroup K2". That name has since been re-assigned to K-M526, the sibling of Haplogroup LT.

[K2a-16] Haplogroup K2a (M2308) and its primary subclade K-M2313 were separated from Haplogroup NO (F549) in 2016. (This followed the publication of: Poznik GD, Xue Y, Mendez FL, et al. (2016). "Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences". Nature Genetics. 48 (6): 593–9. doi:10.1038/ng.3559. PMC 4884158. PMID 27111036. In the past, other haplogroups, including NO (M214) and K2e had also been identified with the name "K2a".

[K2b-17] Haplogroup K2b (M1221/P331/PF5911) is also known as Haplogroup MPS.

[K2e-18] Haplogroup K2e (K-M147) was previously known as "Haplogroup X" and "K2a" (but is a sibling subclade of the present K2a).

[K-M2313-19] K-M2313*, which as yet has no phylogenetic name, has been documented in two living individuals, who have ethnic ties to India and South East Asia. In addition, K-Y28299, which appears to be a primary branch of K-M2313, has been found in three living individuals from India. See: Poznik op. cit.; YFull YTree v5.08, 2017, "K-M2335", and; PhyloTree, 2017, "Details of the Y-SNP markers included in the minimal Y tree" (Access date of these pages: 9 December 2017)

[K2b1-20] Haplogroup K2b1 (P397/P399) is also known as Haplogroup MS, but has a broader and more complex internal structure.

[P-21] Haplogroup P (P295) is also klnown as K2b2.

[S-22] Haplogroup S, as of 2017, is also known as K2b1a. (Previously the name Haplogroup S was assigned to K2b1a4.)

[M-23] Haplogroup M, as of 2017, is also known as K2b1b. (Previously the name Haplogroup M was assigned to K2b1d.)

[1]

[2]

[3]

[4]

[5]

[6]

[7]

[8]

[9]

[χ 1]

[χ 2]

[χ 3]

[χ 4]

[χ 5]

[χ 6]

[χ 7]

[χ 8]

[χ 9]

[χ 10]

[χ 11]

[χ 12]

[χ 13]

[χ 14]

@@ Line 13: / Line 13: @@
 '''Haplogroup D-Z27276''' also known as '''Haplogroup D1a1''' is a [[Y-chromosome]] [[haplogroup]]. It is one of two  branches of [[Haplogroup D1 (Y-DNA)|Haplogroup D1]], one of the descendants of [[Haplogroup D (Y-DNA)|Haplogroup D]]. The other is [[Haplogroup D-M55|D-M55]] which is only found in [[Japan]].
-This group is found in about 49% [[Tibetan people]]<ref>Karafet, T. M.; Hallmark, B.; Cox, M. P.; Sudoyo, H.; Downey, S.; Lansing, J. S.; Hammer, M. F. (2010). "Major East-West Division Underlies Y Chromosome Stratification across Indonesia". Molecular Biology and Evolution 27 (8): 1833–44. doi:10.1093/molbev/msq063. {{PMID|20207712}}.</ref>. It branched off [[Haplogroup D1b (Y-DNA)|D-M55]] 35,000-40,000 years before present or already 53,000 years before present.<ref name="shi">{{cite journal|title=Y chromosome evidence of earliest modern human settlement in East Asia and multiple origins of Tibetan and Japanese populations |first13=Bing |last13=Su |first12=Li |last12=Jin |first11=R Spencer |last11=Wells |first10=Chun-Jie |last10=Xiao |first9=Runlin Z|last9=Ma|first8=Si-jie|last8=Tan|first7=Lu-Fang|last7=Liu|first6=Feng|last6=Zhang|first5=Xue-bin|last5=Qi|first4=Yong-li|last4=Dong|first3=Yi|last3=Peng|first2=Hua|last2=Zhong|first1=Hong|last1=Shi|journal=BMC Biology|publisher=BioMed Central|date=October 29, 2008|doi=10.1186/1741-7007-6-45|pmid=18959782|pmc=2605740|url=http://www.biomedcentral.com/1741-7007/6/45|accessdate=November 21, 2010|volume=6|page=45}} {{open access}}</ref><ref>Mondal, Mayukh & Bergström, Anders & Xue, Yali & Calafell, Francesc & Laayouni, Hafid & Casals, Ferran & Majumder, Partha & Tyler-Smith, Chris & Bertranpetit, Jaume. (2017). Y-chromosomal sequences of diverse Indian populations and the ancestry of the Andamanese. Human Genetics. 136. 10.1007/s00439-017-1800-0.</ref>
+This group is found in about 49% [[Tibetan people]]<ref name="Hammer2006">{{Cite journal |author = Michael F Hammer |author2 = Tatiana M Karafet |author3 = Hwayong Park |author4 = Keiichi Omoto |author5 = Shinji Harihara |author6 = Mark Stoneking |author7 = Satoshi Horai |year = 2006 |title = Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes |journal = Journal of Human Genetics |volume = 51 |issue = 1 |pages = 47 - 58 |doi = 10.1007/s10038-005-0322-0 |pmid = 16328082 }}</ref>. It branched off [[Haplogroup D1b (Y-DNA)|D-M55]] 35,000-40,000 years before present or already 53,000 years before present.<ref name="shi">{{cite journal|title=Y chromosome evidence of earliest modern human settlement in East Asia and multiple origins of Tibetan and Japanese populations |first13=Bing |last13=Su |first12=Li |last12=Jin |first11=R Spencer |last11=Wells |first10=Chun-Jie |last10=Xiao |first9=Runlin Z|last9=Ma|first8=Si-jie|last8=Tan|first7=Lu-Fang|last7=Liu|first6=Feng|last6=Zhang|first5=Xue-bin|last5=Qi|first4=Yong-li|last4=Dong|first3=Yi|last3=Peng|first2=Hua|last2=Zhong|first1=Hong|last1=Shi|journal=BMC Biology|publisher=BioMed Central|date=October 29, 2008|doi=10.1186/1741-7007-6-45|pmid=18959782|pmc=2605740|url=http://www.biomedcentral.com/1741-7007/6/45|accessdate=November 21, 2010|volume=6|page=45}} {{open access}}</ref><ref>Mondal, Mayukh & Bergström, Anders & Xue, Yali & Calafell, Francesc & Laayouni, Hafid & Casals, Ferran & Majumder, Partha & Tyler-Smith, Chris & Bertranpetit, Jaume. (2017). Y-chromosomal sequences of diverse Indian populations and the ancestry of the Andamanese. Human Genetics. 136. 10.1007/s00439-017-1800-0.</ref>
 == Phylogenetic tree ==