Thermus
| Thermus | |
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| Thermus aquaticus | |
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| Genus: | Thermus Brock & Freeze, 1969
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Thermus is a genus of thermophilic bacteria. It is one of several bacteria belonging to the Deinococcus–Thermus group. It includes the following species:[1][2][3]
- "T. caldophilus" * Taguchi et al. 1983
- "T. eggertssonii" * Peters 2008
- "T. kawarayensis" * Kurosawa et al. 2005
- "T. murrieta" * Benner et al. 2006
- "T. nonproteolyticus" * 1992
- "T. parvatiensis" * Dwivedi et al. 2015
- "T. rehai" * Lin et al. 2002
- "T. yunnanensis" * Gong et al. 2005
- Thermus amyloliquefaciens Yu et al. 2015[4]
- Thermus antranikianii Chung, Rainey, Valente, Nobre, & da Costa, 2000[5]
- Thermus aquaticus Brock & Freeze, 1969[6]
- Thermus arciformis Zhang et al. 2010[7]
- Thermus brockianus Williams et al. 1995[8]
- Thermus caldifontis Khan et al. 2017
- Thermus caliditerrae Ming et al. 2014[9]
- Thermus chliarophilus Tenreiro et al. 1995[10]
- Thermus composti Vajna et al. 2012[11]
- Thermus filiformis Hudson et al. 1987[12]
- Thermus igniterrae Chung, Rainey, Valente, Nobre, & da Costa, 2000[5]
- Thermus islandicus Bjornsdottir et al. 2009[13]
- Thermus oshimai Williams et al. 1996[14]
- Thermus scotoductus Kristjánsson, Hjörleifsdóttir, Marteinsson, & Alfredsson, 1994[15]
- Thermus tengchongensis Yu, Yao, Ming, Yin, Zhou, Liu, Tang & Li, 2013[16]
- Thermus thermophilus (ex Oshima and Imahori 1974) Manaia et al. 1995[17]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [18] and National Center for Biotechnology Information (NCBI)[19] and the phylogeny is based on 16S rRNA-based LTP release 132 by 'The All-Species Living Tree' Project.[20]
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Note:
* Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)
See also
References
- ^ Brock TD; Freeze H (1969). "Thermus aquaticus, a Nonsporulating Extreme Thermophile". J. Bacteriol. 98 (1): 289–97. doi:10.1128/jb.98.1.289-297.1969. PMC 249935. PMID 5781580.
{{cite journal}}: Unknown parameter|last-author-amp=ignored (|name-list-style=suggested) (help) - ^ Chung, A. P.; Rainey, F. A.; Valente, M.; Nobre, M. F.; da Costa, M. S. (2000). "Thermus igniterrae sp. nov. and Thermus antranikianii sp. nov., two new species from Iceland". International Journal of Systematic and Evolutionary Microbiology. 50 (1): 209–217. doi:10.1099/00207713-50-1-209. ISSN 1466-5026. PMID 10826806.
- ^ LSPN. "Thermus". LPSN. Retrieved 2016-03-10.
- ^ Yu, Tian-Tian; Park, Dong-Jin; Hozzein, Wael N.; Kim, Chang-Jin; Wadaan, Mohammed A. M.; Ming, Hong; Li, Wen-Jun; Yao, Ji-Cheng; Zhou, En-Min (2015-08-01). "Thermus amyloliquefaciens sp. nov., isolated from a hot spring sediment sample". International Journal of Systematic and Evolutionary Microbiology. 65 (8): 2491–2495. doi:10.1099/ijs.0.000289. PMID 25920724.
- ^ a b Chung, A. P.; Rainey, F. A.; Valente, M.; Nobre, M. F.; Costa, M. S. da (2000-01-01). "Thermus igniterrae sp. nov. and Thermus antranikianii sp. nov., two new species from Iceland". International Journal of Systematic and Evolutionary Microbiology. 50 (1): 209–217. doi:10.1099/00207713-50-1-209. PMID 10826806.
- ^ Brock, Thomas D.; Freeze, Hudson (1969-04-01). "Thermus aquaticus gen. n. and sp. n., a Nonsporulating Extreme Thermophile". Journal of Bacteriology. 98 (1): 289–297. doi:10.1128/jb.98.1.289-297.1969. ISSN 0021-9193. PMC 249935. PMID 5781580.
- ^ Zhang, X. Q.; Ying, Y.; Ye, Y.; Xu, X. W.; Zhu, X. F.; Wu, M. (2010-04-01). "Thermus arciformis sp. nov., a thermophilic species from a geothermal area". International Journal of Systematic and Evolutionary Microbiology. 60 (4): 834–839. doi:10.1099/ijs.0.007690-0. PMID 19661520.
- ^ WILLIAMS, R. A. D.; SMITH, K. E.; WELCH, S. G.; MICALLEF, J.; SHARP, R. J. (1995-07-01). "DNA Relatedness of Thermus Strains, Description of Thermus brockianus sp. nov., and Proposal To Reestablish Thermus thermophilus (Oshima and Imahori)". International Journal of Systematic Bacteriology. 45 (3): 495–499. doi:10.1099/00207713-45-3-495. PMID 8590676.
- ^ Ming, H.; Yin, Y.-R.; Li, S.; Nie, G.-X.; Yu, T.-T.; Zhou, E.-M.; Liu, L.; Dong, L.; Li, W.-J. (2014-02-01). "Thermus caliditerrae sp. nov., a novel thermophilic species isolated from a geothermal area". International Journal of Systematic and Evolutionary Microbiology. 64 (Pt 2): 650–656. doi:10.1099/ijs.0.056838-0. PMID 24158953.
- ^ TENREIRO, S.; NOBRE, M. F.; COSTA, M. S. DA (1995-10-01). "Thermus silvanus sp. nov. and Thermus chliarophilus sp. nov., Two New Species Related to Thermus ruber but with Lower Growth Temperatures". International Journal of Systematic Bacteriology. 45 (4): 633–639. doi:10.1099/00207713-45-4-633. PMID 7547281.
- ^ Vajna, B.; Kanizsai, S.; Keki, Z.; Marialigeti, K.; Schumann, P.; Toth, E. M. (2012-07-01). "Thermus composti sp. nov., isolated from oyster mushroom compost". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 7): 1486–1490. doi:10.1099/ijs.0.030866-0. PMID 21856987.
- ^ Hudson, J. A.; Morgan, H. W.; Daniel, R. M. (1987-01-01). "Thermus filiformis sp. nov., a Filamentous Caldoactive Bacterium". International Journal of Systematic and Evolutionary Microbiology. 37 (4): 431–436. doi:10.1099/00207713-37-4-431.
- ^ Bjornsdottir, Snaedis H.; Petursdottir, Solveig K.; Hreggvidsson, Gudmundur O.; Skirnisdottir, Sigurlaug; Hjorleifsdottir, Sigridur; Arnfinnsson, Johann; Kristjansson, Jakob K. (2009-01-01). "Thermus islandicus sp. nov., a mixotrophic sulfur-oxidizing bacterium isolated from the Torfajokull geothermal area". International Journal of Systematic and Evolutionary Microbiology. 59 (12): 2962–2966. doi:10.1099/ijs.0.007013-0. PMID 19628590.
- ^ WILLIAMS, RALPH A. D.; SMITH, KELVIN E.; WELCH, SIMON G.; MICALLEF, JANICE (1996-01-01). "Thermus oshimai sp. nov., Isolated from Hot Springs in Portugal, Iceland, and the Azores, and Comment on the Concept of a Limited Geographical Distribution of Thermus Species". International Journal of Systematic and Evolutionary Microbiology. 46 (2): 403–408. doi:10.1099/00207713-46-2-403. PMID 8934898.
- ^ Kristjánsson, Jakob; Hjörleifsdóttir, Sigrídur; Marteinsson, Viggó; Alfredsson, Gudni (1994). "Thermus scotoductus, sp. nov., a Pigment-Producing Thermophilic Bacterium from Hot Tap Water in Iceland and Including Thermus sp. X-1". Systematic and Applied Microbiology. 17 (1): 44–50. doi:10.1016/S0723-2020(11)80030-5.
- ^ Yu, Tian-Tian; Yao, Ji-Cheng; Ming, Hong; Yin, Yi-Rui; Zhou, En-Min; Liu, Min-Jiao; Tang, Shu-Kun; Li, Wen-Jun (2013). "Thermus tengchongensis sp. nov., isolated from a geothermally heated soil sample in Tengchong, Yunnan, south-west China". Antonie van Leeuwenhoek. 103 (3): 513–518. doi:10.1007/s10482-012-9833-9. PMID 23104072.
- ^ Manaia, Célia M.; Hoste, Bart; Carmen Gutierrez, M.; Gillis, Monique; Ventosa, Antonio; Kersters, Karel; Da Costa, Milton S. (1995-02-01). "Halotolerant Thermus Strains from Marine and Terrestrial Hot Springs Belong to Thermus thermophilus (ex Oshima and Imahori, 1974) nom. rev. emend". Systematic and Applied Microbiology. 17 (4): 526–532. doi:10.1016/S0723-2020(11)80072-X.
- ^ J.P. Euzéby. "Deinococcus–Thermus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2018-07-20.
- ^ Sayers; et al. "Deinococcus–Thermus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2018-07-20.
- ^ "16S rRNA-based LTP release 132 (full tree)". All-Species Living Tree Project. Silva Comprehensive Ribosomal RNA Database. Retrieved 2018-07-20.