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Haplogroup H5 (mtDNA): Difference between revisions

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| ancestor = [[H5-22]]<ref>http://www.rodneyjewett.com/PhyloTree.org%20-%20mtDNA%20tree%20Build%203.pdf</ref>
| ancestor = [[Haplogroup H (mtDNA)|H]]
| descendants =H5A,H5A1,H5A2,H5B<ref>http://www.rodneyjewett.com/PhyloTree.org%20-%20mtDNA%20tree%20Build%203.pdf</ref>
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| mutations = C456T, T16304C<ref name="vanOven"> {{cite journal|title=Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation|journal=Human Mutation|date=13 Oct 2008|first=Mannis|last=van Oven|coauthors=Manfred Kayser|volume=30|issue=2|pages=E386-E394|id=PMID 18853457 {{doi|10.1002/humu.20921}}|url=http://www3.interscience.wiley.com/journal/121449735/abstract?CRETRY=1&SRETRY=0|format=|accessdate=2009-05-20 }}</ref>
| mutations = C456T, T16304C<ref name="vanOven"> {{cite journal|title=Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation|journal=Human Mutation|date=13 Oct 2008|first=Mannis|last=van Oven|coauthors=Manfred Kayser|volume=30|issue=2|pages=E386-E394|id=PMID 18853457 {{doi|10.1002/humu.20921}}|url=http://www3.interscience.wiley.com/journal/121449735/abstract?CRETRY=1&SRETRY=0|format=|accessdate=2009-05-20 }}</ref>
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Revision as of 04:20, 31 May 2009

Haplogroup H5
AncestorH5-22[1]
DescendantsH5A,H5A1,H5A2,H5B[2]
Defining mutationsC456T, T16304C[3]

Origin

H5 is possibly the forth oldest subclade of mtDNA haplogroup H after H1, H2, and H6.[4]

The two subclades of "subclade H5" are H5* and H5A, the latter of which can be further divided into H5A1. Subclade H5 is defined by T16304C in the HVR1 region and minor subclade H5A is defined by T4336C in the control region.[5] Subclade H5 is also defined by 456 in the HVR2 region.[5]

Distribution

It is most common in Wales and the Piedmont region of Italy, where it is found at a frequency of 10-15%.[6] [7]

Subclades

Tree

This phylogenetic tree of haplogroup subclades is based on the Van Oven 2008 tree[3] and subsequent published research.

See also

Phylogenetic tree of human mitochondrial DNA (mtDNA) haplogroups

  Mitochondrial Eve (L)    
L0 L1–6  
L1 L2   L3     L4 L5 L6
M N  
CZ D E G Q   O A S R   I W X Y
C Z B F R0   pre-JT   P   U
HV JT K
H V J T

References

  1. ^ http://www.rodneyjewett.com/PhyloTree.org%20-%20mtDNA%20tree%20Build%203.pdf
  2. ^ http://www.rodneyjewett.com/PhyloTree.org%20-%20mtDNA%20tree%20Build%203.pdf
  3. ^ a b van Oven, Mannis (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation. 30 (2): E386–E394. PMID 18853457 doi:10.1002/humu.20921. Retrieved 2009-05-20. {{cite journal}}: Unknown parameter |coauthors= ignored (|author= suggested) (help)
  4. ^ Luísa Pereira; et al. "High-resolution mtDNA evidence for the late-glacial resettlement of Europe from an Iberian refugium". CSH Press Genome Research. Retrieved December 24, 2008. {{cite web}}: Explicit use of et al. in: |author= (help)
  5. ^ a b Genebaseteam. "The mtDNA and its role in Ancestry: Part XI (mtDNA Haplogroup H)". Genebase Systems. Retrieved December 24, 2008.
  6. ^ http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1852723
  7. ^ http://www.familytreedna.com/public/H%20mtDNA%20Haplogroup/

External links

  • Haplogroup H5