Cell culture

Epithelial cells in culture, stained for keratin (red) and DNA (green)

Cell culture is the process by which prokaryotic or eukaryotic cells are grown under controlled conditions. In practice the term "cell culture" has come to refer to the culturing of cells derived from multicellular eukaryotes, especially animal cells. The historical development and methods of cell culture are closely interrelated to those of tissue culture and organ culture.

Animal cell culture became a common laboratory technique in the mid-1900's, but the concept of maintaining live cell lines separated from their original tissue source was discovered in the 19th century.

History

The 19th-century English physiologist Sydney Ringer developed salt solutions containing the chlorides of sodium, potassium, calcium and magnesium suitable for maintaining the beating of an isolated animal heart outside of the body.[1] In 1885 Wilhelm Roux removed a portion of the medullary plate of an embryonic chicken and maintained it in a warm saline solution for several days, establishing the principle of tissue culture. Ross Granville Harrison, working at Johns Hopkins Medical School and then at Yale University, published results of his experiments from 1907-1910, establishing the methodology of tissue culture.

Cell culture techniques were advanced significantly in the 1940s and 1950s to support research in virology. Growing viruses in cell cultures allowed preparation of purified viruses for the manufacture of vaccines. The Salk polio vaccine was one of the first products mass-produced using cell culture techniques. This vaccine was made possible by the cell culture research of John Franklin Enders, Thomas Huckle Weller, and Frederick Chapman Robbins, who were awarded a Nobel Prize for their discovery of a method of growing the virus in monkey kidney cell cultures.

Concepts in mammalian cell culture

Isolation of cells

Cells can be isolated from tissues for ex vivo culture in several ways. Cells can be easily purified from blood, however only the white cells are capable of growth in culture. Mononuclear cells can be released from soft tissues by enzymatic digestion with enzymes such as collagenase, trypsin, or pronase, which break down the extracellular matrix. Alternatively, pieces of tissue can be placed in growth media, and the cells that grow out are available for culture. This method is known as explant culture.

Cells that are cultured directly from a subject are known as primary cells. With the exception of some derived from tumours, most primary cell cultures have limited lifespan. After a certain number of population doublings cells undergo the process of senescence and stop dividing, while generally retaining viability.

An established or immortalised cell line has acquired the ability to proliferate indefinitely either through random mutation or deliberate modification, such as artificial expression of the telomerase gene. There are numerous well established cell lines representative of particular cell types.

Maintaining cells in culture

Cells are grown and maintained at an appropriate temperature and gas mixture (typically, 37°C, 5% CO₂ for mammalian cells) in a cell incubator. Culture conditions vary widely for each cell type, and variation of conditions for a particular cell type can result in different phenotypes being expressed.

Aside from temperature and gas mixture, the most commonly varied factor in culture systems is the growth medium. Recipes for growth media can vary in pH, glucose concentration, growth factors, and the presence of other nutrients. The growth factors used to supplement media are often derived from animal blood, such as calf serum. One complication of these blood-derived ingredients is the potential for contamination of the culture with viruses or prions, particularly in biotechnology medical applications. Current practice is to minimize or eliminate the use of these ingredients wherever possible, but this cannot always be accomplished.

Cells can be grown in suspension or adherent cultures. Some cells naturally live in suspension, without being attached to a surface, such as cells that exist in the bloodstream. There are also cell lines that have been modified to be able to survive in suspension cultures so that they can be grown to a higher density than adherent conditions would allow. Adherent cells require a surface, such as tissue culture plastic, which may be coated with extracellular matrix components to increase adhesion properties and provide other signals needed for growth and differentiation. Most cells derived from solid tissues are adherent. Another type of adherent culture is organotypic culture which involves growing cells in a three-dimensional environment as opposed to two-dimensional culture dishes. This 3D culture system is biochemically and physiologically more similar to in vivo tissue, but is technically challening to maintain because of many factors (e.g. diffusion).

Cell line cross-contamination

Cell line cross-contamination can be a problem for scientists working with cultured cells. Studies suggest that anywhere from 15–20% of the time, cells used in experiments have been misidentified or contaminated with another cell line. Problems with cell line cross contamination even been detected in lines from the NCI-60 panel, which are used routinely for drug-screening studies. Major cell line repositories including the American Type Culture Collection (ATCC) and the European Collection of Cell Cultures (ECACC) have received cell line submissions from researchers that were misidentified by the researcher. Such contamination poses a problem for the quality of research produced using cell culture lines, and the major repositories are now authenticating all cell line submissions. ATCC uses short tandem repeat (STR) DNA fingerprinting to authenticate its cell lines.

To address this problem of cell line cross-contamination, researchers are encouraged to authenticate their cell lines at an early passage to establish the identity of the cell line. Authentication should be repeated before freezing cell line stocks, every two months during active culturing and before any publication of research data generated using the cell lines. There are many methods for identifying cell lines including isoenzyme analysis, human lymphocyte antigen (HLA) typing and STR analysis.

Manipulation of cultured cells

As cells generally continue to divide in culture, they generally grow to fill the available area or volume. This can generate several issues:

• Nutrient depletion in the growth media
• Accumulation of apoptotic/necrotic (dead) cells.
• Cell-to-cell contact can stimulate cell cycle arrest, causing cells to stop dividing known as contact inhibition or senescence.
• Cell-to-cell contact can stimulate cellular differentiation.

Among the common manipulations carried out on culture cells are media changes, passaging cells, and transfecting cells. These are generally performed using tissue culture methods that rely on sterile technique. Sterile technique aims to avoid contamination with bacteria, yeast, or other cell lines. Manipulations are typically carried out in a biosafety hood or laminar flow cabinet to exclude contaminating micro-organisms. Antibiotics (e.g. penicillin and streptomycin) and antifungals (e.g. Amphotericin B) can also be added to the growth media.

As cells undergo metabolic processes, acid is produced and the pH decreases. Often, a pH indicator is added to the medium in order to measure nutrient depletion.

Media changes

In the case of adherent cultures, the media can be removed directly by aspiration and replaced.

Passaging cells

Main article: Passaging

Passaging (also known as subculture or splitting cells) involves transferring a small number of cells into a new vessel. Cells can be cultured for a longer time if they are split regularly, as it avoids the senescence associated with prolonged high cell density. Suspension cultures are easily passaged with a small amount of culture containing a few cells diluted in a larger volume of fresh media. For adherent cultures, cells first need to be detached; this is commonly done with a mixture of trypsin-EDTA, however other enzyme mixes are now available for this purpose. A small number of detached cells can then be used to seed a new culture.

Transfection and transduction

Main article: transfection

Main article: transformation (genetics)

Another common method for manipulating cells involves the introduction of foreign DNA by transfection. This is often performed to cause cells to express a protein of interest. More recently, the transfection of RNAi constructs have been realized as a convenient mechanism for suppressing the expression of a particular gene/protein.

DNA can also be inserted into cells using viruses, in methods referred to as transduction, infection or transformation. Viruses, as parasitic agents, are well suited to introducing DNA into cells, as this is a part of their normal course of reproduction.

Established human cell lines

One of the earliest human cell lines, descended from Henrietta Lacks, who died of the cancer that those cells originated from, the cultured HeLa cells shown here have been stained with Hoechst turning their nuclei blue.

Cell lines that originate with humans have been somewhat controversial in bioethics, as they may outlive their parent organism and later be used in the discovery of lucrative medical treatments. In the pioneering decision in this area, the Supreme Court of California held in Moore v. Regents of the University of California that human patients have no property rights in cell lines derived from organs removed with their consent.

Generation of hybridomas

Further information: Hybridoma

It is possible to fuse normal cells with an immortalised cell line. This method is used to produce monoclonal antibodies. In brief, lymphocytes isolated from the spleen (or possibly blood) of an immunised animal are combined with an immortal myeloma cell line (B cell lineage) to produce a hybridoma which has the antibody specifity of the primary lymphoctye and the immortality of the myleoma. Selective growth medium (HA or HAT) is used to select against unfused myeloma cells; primary lymphoctyes die quickly in culture and only the fused cells survive. These are screened for production of the required antibody, generally in pools to start with and then after single cloning.

Applications of cell culture

Mass culture of animal cell lines is fundamental to the manufacture of viral vaccines and many products of biotechnology. Biological products produced by recombinant DNA (rDNA) technology in animal cell cultures include enzymes, synthetic hormones, immunobiologicals (monoclonal antibodies, interleukins, lymphokines), and anticancer agents. Although many simpler proteins can be produced using rDNA in bacterial cultures, more complex proteins that are glycosylated (carbohydrate-modified) currently must be made in animal cells. An important example of such a complex protein is the hormone erythropoietin. The cost of growing mammalian cell cultures is high, so research is underway to produce such complex proteins in insect cells or in higher plants.

Tissue culture and engineering

Cell culture is a fundamental component of tissue culture and tissue engineering, as it establishes the basics of growing and maintaining cells ex vivo.

Vaccines

Vaccines for polio, measles, mumps, rubella, and chickenpox are currently made in cell cultures. Due to the H5N1 pandemic threat, research into using cell culture for influenza vaccines is being funded by the United States government. Novel ideas in the field include recombinant DNA-based vaccines, such as one made using human adenovirus (a common cold virus) as a vector, or the use of adjuvants.

Culture of non-mammalian cells

Plant cell culture methods

See also: Tobacco BY-2 cells

Plant cell cultures are typically grown as cell suspension cultures in liquid medium or as callus cultures on solid medium. The culturing of undifferentiated plant cells and calli requires the proper balance of the plant growth hormones auxin and cytokinin.

Bacterial/Yeast culture methods

Main article: microbiological culture

For bacteria and yeast, small quantities of cells are usually grown on a solid support that contains nutrients embedded in it, usually a gel such as agar, while large-scale cultures are grown with the cells suspended in a nutrient broth.

Viral culture methods

The culture of viruses requires the culture of cells of mammalian, plant, fungal or bacterial origin as hosts for the growth and replication of the virus. Whole wild type viruses, recombinant viruses or viral products may be generated in cell types other than their natural hosts under the right conditions. Depending on the species of the virus, infection and viral replication may result in host cell lysis and formation of a viral plaque.

Common cell lines

Human cell lines

• National Cancer Institute's 60 cancer cell lines
• ESTDAB database http://www.ebi.ac.uk/ipd/estdab/directory.html

• DU145 (Prostate cancer)
• Lncap (Prostate cancer)
• MCF-7 (breast cancer)
• MDA-MB-438 (breast cancer)
• PC3 (Prostate cancer)
• T47D ([breast cancer])
• THP-1 (acute myeloid leukemia)
• U87 (glioblastoma)
• SHSY5Y Human neuroblastoma cells, cloned from a myeloma
• Saos-2 cells (bone cancer)

Primate cell lines

• Vero (African green monkey Chlorocebus kidney epithelial cell line initiated 1962)

Rat tumor cell lines

• GH3 (pituitary tumor)
• PC12 (pheochromocytoma)

Mouse cell lines

• MC3T3 (embryonic calvarial)

Plant cell lines

• Tobacco BY-2 cells (kept as cell suspension culture, they are model system of plant cell)

Other species cell lines

• zebrafish ZF4 and AB9 cells.
• Madin-Darby Canine Kidney (MDCK) epithelial cell line
• Xenopus A6 kidney epithelial cells.

List of cell lines

Cell line	Meaning	Organism	Origin tissue	Morphology	Link
293-T		Human	kidney (embryonic)		Derivative of HEK 293
3T3 cells	"3-day transfer, inoculum 3 x 105 cells"	Mouse	embryonic fibroblast		Also known as NIH 3T3 ECACC
721		Human	melanoma
9L		Rat	glioblastoma
A172		human	glioblastoma	malignant glioma	ECACC
A20		murine	B lymphoma	B lymphocyte
A253		human	head and neck carcinoma	submandibular duct
A431		human	skin epithelium	squamous carcinoma	ECACCBiotech Institute
A-549		human	lungcarcinoma	epithelium	DSMZECACC
ALC		murine	bone marrow	stroma	NCBI
B16		murine	Melanoma		ECCAC
B35		rat	Neuroblastoma		ATCC
BCP-1 cells		Human	PBMC	HIV+ lymphoma	ATCC
bEnd.3	brain endothelial	mouse	brain / cerebral Cortex	endothelium	ATCC
BHK-21	"Baby Hamster Kidney Fibroblast cells"	Hamster	kidney	fibroblast	ECACCOlympus
BR 293		human	breast	breast cancer
BxPC3	Biopsy xenograph of pancreatic carcinoma line 3	human	pancreatic adenocarcinoma	epithelial	ATCC
C3H-10T1/2		Mouse	Embryonic mesenchymal cell line		ECACC
C6/36		Asian tiger mosquito	larval tissue		ECACC
Cal-27		human	tongue	squamous cell carcinoma	Biotech institute
CHO	Chinese hamster ovary	hamster	Ovary	epithelium	ECACCICLC
COS-7	Cercopithecus aethiops, origin-defective SV-40	ape - Cercopithecus aethiops (Chlorocebus)	kidney	fibroblast	ECACCATCC
CML T1	Chronic Myelod Leukaemia T-lymphocyte 1	human	CML acute phase	T cell leukaemia	Blood
CMT	canine mammary tumor	dog	mammary gland	epithelium
CT26		murine	Colorectal Carcinoma	Colon
D17		canine	osteosarcoma		ECACC
DH82		canine	histiocytosis	monocyte/macrophage	ECACC J Vir Meth
DU145		human	Androgen insensitive carcinoma	Prostate
EL4		mouse		T cell leukaemia	ECACC
EM2		human	CML blast crisis	Ph+ CML line	Biotech institute
EM3		human	CML blast crisis	Ph+ CML line	Biotech institute
FM3		human	Metastatic lymph node	melanoma	Biotech institute
H1299		human	lung	lung cancer
HB54		hybridoma	hybridoma	secretes L243 mAb (against HLA-DR)	Human Immunology
HB55		hybridoma	hybridoma	secretes MA2.1 mAb (against HLA-A2 and HLA-B17)	Journal of Immunology
HCA2		human	fibroblast		Journal of General Virology
HEK-293	human embryonic kidney	human	kidney (embryonic)	epithelium	ATCC
HeLa	Henrietta Lacks	human	Cervical cancer	epithelium	DSMZECACC
Hepa1c1c7	clone 7 of clone 1 hepatoma line 1	mouse	Hepatoma	epithelial	ECACC [http://www.lgcpromochem-atcc.com/common/catalog/numSearch/numResults.cfm?atccNum=CRL-2026 ATCC|-	HL-60	human leukemia	human	Myeloblast	bloodcells	ECACCDSMZ
HMEC	human mammary epithelial cell	human		epithelium	ECACC
HT-29		human	colon epithelium	adenocarcinoma	ECACC Biotech Institute
HUVEC	human umbilical vein endothelial cells	human	Umbilical cord vein	endothelium	ICLCECACC
Jurkat		human	T-Cell-Leukemia	white blood cells	ECACC DSMZ
JY cells		human	lymphoblastoid	EBV immortalised B cell
K562 cells		human	lymphoblastoid	CML blast crisis	ECACC
Ku812		human	lymphoblastoid	erythroleukemia	ECACC LGCstandards
KCL22		human	lymphoblastoid	CML
KG1		human	lymphoblastoid	AML
KYO1	Kyoto 1	human	lymphoblastoid	CML	DSMZ
LNCap		human	prostatic adenocarcinoma	epithelium	ECACCATCC
Ma-Mel 1, 2, 3....48		human		a range of melanoma cell lines
MC-38		mouse		adenocarcinoma
MCF-10A	Michigan Cancer Foundation	human	mammary gland	epithelium	ATCC
MDA-231		human	breast	cancer	ECACC
MDA-468		human	breast	cancer	ECACC
MDA-MB-435		human	breast	melanoma or carcinoma (disputed)	Cambridge Pathology ECACC
MDCK II	Madin Darby canine kidney	dog	kidney	epithelium	ECACC ATCC
MDCK II	Madin Darby canine kidney	dog	kidney	epithelium	[2] ATCC
MONO-MAC 6		human	WBC	myeloid metaplasic AML	Biotech Institute
MTD-1A		mouse		epithelium
MyEnd	myocardial endothelial	mouse		endothelium
NIH-3T3	NIH, 3-day transfer, inoculum 3 x 105 cells	mouse	embryo	fibroblast	ECACCATCC
NALM-1			peripheral blood	blast-crisis CML	Cancer Genetics and Cytogenetics
NW-145				melanoma	ESTDAB
OPCN / OPCT cell lines	Onyvax[3] Prostate Cancer....			Range of prostate tumour lines	Asterand
Peer		human	T cell leukemia		DSMZ
PNT-1A / PNT 2				Prostate tumour lines	ECACC
RenCa	Renal Carcinoma	mouse		renal carcinoma
RMA/RMAS		mouse		T cell tumour
Saos-2 cells		human		Osteosarcoma ECACC
Sf-9	Spodoptera frugiperda	insect - Spodoptera frugiperda (moth)	Ovary		DSMZECACC
SkBr3		human		breast carcinoma
T2		human		T cell leukemia/B cell line hybridoma	DSMZ
T84		human	colorectal Carcinoma / lungmetastasis	epithelium	ECACCATCC
THP1 cell line		human	monocyte	AML	ECACC
U373		human	glioblastoma-astrocytoma	epithelium
U87		human	glioblastoma-astrocytoma	epithelial-like	Abcam
U937		human	leukaemic monocytic lymphoma		ECACC
Vero cells	'Vera Redno' ('green kidney') / 'Vero' ('truth')	African Green Monkey	kidney epithelium		ECACC
WM39		human	skin	primary melanoma
WT-49		human	lymphoblastoid
X63		mouse	melanoma
YAC-1		mouse	lymphoma		Biotech Institute ECACC
YAR		human	B-cell	EBV transofrmed	[4] Human Immunology

Note: this list is a sample of available cell lines, and is not comprehensive

See also

• Biological immortality
• Cell culture assays
• List of contaminated cell lines
• Organ culture
• Plant tissue culture
• Tissue culture

References and notes

• Health Protection Agency Culture Collections ECACC
• MacLeod, R. A. F. et al. (1999): Widespread intraspecies cross-contamination of human tumour cell lines. International Journal of Cancer 83:555–563.
• Masters, John R. (2002): HeLa cells 50 years on: the good, the bad and the ugly. Nature Reviews Cancer 2:315-319.

External links

• Health Protection Agency Culture Collections - including ECACC (European Collection of Cell Cultures)
• Witkowski JA. Experimental pathology and the origins of tissue culture: Leo Loeb's contribution. Med Hist. 1983 July; 27(3): 269–288.
• atcc
• Coriell Cell Repositories
• The National Centre for Cell Science (NCCS), Pune, India; national repository for cell lines/hybridomas etc.
• Neural Stem Cell Culture: Neurosphere generation, microscopical analysis and cryopreservation (a protocol)
• Rat Chromaffin cells primary cultures: Standardization and quality assessment for single-cell assays (a protocol)
• Table of common cell lines from Alberts 4th ed.