Jump to content

Haplogroup Q-M25: Difference between revisions

From Wikipedia, the free encyclopedia
Browse history interactively
← Previous editNext edit →
Content deleted Content added
VisualWikitext
Nusdlog1 (talk | contribs)
105 edits
No edit summary
Nusdlog1 (talk | contribs)
105 edits
correcting some incorrect data and add omitted references
Line 2: Line 2:
| name = Q-M25
| name = Q-M25
| map =
| map =
| origin-date = Insufficient Data
| origin-date = about 16,800YBP(YFull v3.18)
| origin-place = [[Asia]]
| origin-place = [[Central Asia]]
| ancestor = Q-F1096
| ancestor = Q-F1096(F1215)
| descendants =
| descendants =
| mutations = M25
| mutations = M25
}}
}}


'''Haplogroup Q-M25''', also known as '''Q1a1b''' is a subclade or branch of human [[Y chromosome|Y-DNA]] [[haplogroup]] [[Haplogroup Q-F1096|Q-F1096]] (Q1a1), which is, in turn, a subclade of [[Haplogroup Q-MEH2 (Y-DNA)|Q-MEH2]] (Q1a). In human genetics, each Y-DNA haplogroup consititutes a biological [[paternity|paternal lineage]]s back to a shared common male ancestor.
'''Haplogroup Q-M25''', also known as '''Q1a1b''' is a subclade or branch of human [[Y chromosome|Y-DNA]] [[haplogroup]] [[Haplogroup Q-F1096|Q-F1096]] (Q1a1), which is, in turn, a subclade of [[Haplogroup Q-MEH2 (Y-DNA)|Q-MEH2]] ([[Q1a]]). In human genetics, each Y-DNA haplogroup consititutes a biological [[paternity|paternal lineage]]s back to a shared common male ancestor.


== Distribution ==
== Distribution ==
Q-M25 has descendants in modern populations across all of Eurasia. Recent studies in the Turkmen of Iran and Afghanistan suggest, it is semi dominant in Turkmenistan. Only two detailed studies on the y-dna in Turkmenistan have taken place, one found that the Turkmenistan in Afghanistan have 33.78% Q-M25 [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0076748], another study found that 42.6 percent of Iranian Turkmens have haplogroup Q-M25 (also known as Q1a1b) [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0041252]
Q-M25 has descendants in modern populations across all of Eurasia. Recent studies on the Turkmens of Iran and Afghanistan suggest that it is dominant Y-DNA in Turkmens. Only two detailed studies on the Y-DNA on Turkmens have taken place, one found that the Turkmens in Afghanistan have 31.08% Q-M25 and 2.7% Q1a3-M346(currently Q1a2-M346)(Q total 25/74=33.78%)<ref name="Cristofaro2013">J D Cristofaro et al., 2013, "Afghan Hindu Kush: Where Eurasian Sub-Continent Gene Flows Converge", http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0076748</ref>, another study found that 42.6% of Iranian Turkmens have haplogroup Q-M25 (also known as Q1a1b) <ref name="Grugni2012"/>
===The Americas===
===The Americas===
Line 23: Line 23:
! Population||||Paper||N||Percentage||SNP Tested
! Population||||Paper||N||Percentage||SNP Tested
|-
|-
| Turkmen Iran||||Grugni 2012<ref name=Grugni2012 />||6/184||~42.6%||M25 & M143
| Turkmen Iran||||Grugni 2012<ref name="Grugni2012"/>||29/68||~42.6%||M25 & M143
|-
|-
| Turkmen Afghanistan|||| Cristofaro2013<ref name="Cristofaro2013"/>||23/74||~31.2%||M25 & M346/ (cf)Q1a3(currently Q1a2)=2/74 (Q total=33.8%)
|-
| Turkmen Afghanistan|||| Cristofaro 2013{{citation needed|date=October 2013}}||6/184||~33.8%||M25 & M143
|-
|-
| [[Central Asia]] & [[Siberia]]||||Underhill 2000<ref name=Underhill2000 />||6/184||~3.26%||M25 & M143
| [[Central Asia]] & [[Siberia]]||||Underhill 2000<ref name=Underhill2000 />||6/184||~3.26%||M25 & M143
Line 40: Line 39:


====West Asia====
====West Asia====
The frequency of Q-M25 varies greatly across [[West Asia]]. An extreme peak is seen in the [[Turkmen people|Turkmen]] of [[Golestan Province|Golestan]].<ref name=Grugni2012>{{cite journal |doi = 10.1371/journal.pone.0041252 |title = Ancient Migratory Events in the Middle East: New Clues from the Y-Chromosome Variation of Modern Iranians |year = 2012 |editor1-last = Kivisild |editor1-first = Toomas |last1 = Grugni |first1 = Viola |last2 = Battaglia |first2 = Vincenza |last3 = Hooshiar Kashani |first3 = Baharak |last4 = Parolo |first4 = Silvia |last5 = Al-Zahery |first5 = Nadia |last6 = Achilli |first6 = Alessandro |last7 = Olivieri |first7 = Anna |last8 = Gandini |first8 = Francesca |last9 = Houshmand |first9 = Massoud |last10 = Sanati |first10 = M. H. |last11 = Torroni |first11 = A |last12 = Semino |first12 = O |journal = PLoS ONE |volume = 7 |issue = 7 |pages = e41252 |pmid = 22815981 |pmc = 3399854|display-authors = 8 }}</ref> Across the whole of Iran it varies from over 9 percent of the population in the north to only 2 to 3 percent of the population in the south.<ref name=Regueiro2006>{{cite journal |author=Regueiro M, Cadenas AM, Gayden T, Underhill PA, Herrera RJ |title=Iran: tricontinental nexus for Y-chromosome driven migration |journal=Hum. Hered. |volume=61 |issue=3 |pages=132–43 |year=2006 |pmid=16770078 |doi=10.1159/000093774 }}</ref> The frequency of Q-M25 drops to only about 1 percent of the population of [[Lebanon]]'s Muslims, and it is absent from the non-Muslim population there.<ref name = "Zalloua2008">{{cite journal | doi = 10.1016/j.ajhg.2008.01.020 | last1 = Zalloua | first1 = Pierre A. |name-list-format=vanc | last2 = Xue | first2 = Y| year = 2008 | last3 = Khalife | first3 = J | last4 = Makhoul | first4 = N | last5 = Debiane | first5 = L | last6 = Platt | first6 = DE | last7 = Royyuru | first7 = AK | last8 = Herrera | first8 = RJ | last9 = Hernanz | first9 = DF| last10 = Blue-Smith | first10 = Jason | last11 = Wells | first11 = R. Spencer | last12 = Comas | first12 = David | last13 = Bertranpetit | first13 = Jaume | last14 = Tyler-Smith | first14 = Chris | last15 = Genographic | first15 = Consortium | title = Y-Chromosomal Diversity in Lebanon Is Structured by Recent Historical Events | url = | journal = American Journal of Human Genetics | volume = 82 | issue = 4| pages = 873–882 | pmid = 18374297 | pmc = 2427286 | display-authors = 8 }}</ref> However, its presence in the [[Marsh Arabs]] of Iraq hints that Q-M25's West Asian history extends beyond a single localized recent founder.<ref name=Al-Zahary2011>{{cite journal | doi = 10.1186/1471-2148-11-288 | title = In search of the genetic footprints of Sumerians: A survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq | year = 2011 | last1 = Al-Zahery | first1 = Nadia | last2 = Pala | first2 = Maria | last3 = Battaglia | first3 = Vincenza | last4 = Grugni | first4 = Viola | last5 = Hamod | first5 = Mohammed A | last6 = Kashani | first6 = Baharak | last7 = Olivieri | first7 = Anna | last8 = Torroni | first8 = Antonio | last9 = Santachiara-Benerecetti | first9 = Augusta S | last10 = Semino | first10 = Ornella | journal = BMC Evolutionary Biology | volume = 11 | pages = 288 | pmid = 21970613 | pmc = 3215667}}</ref>
The frequency of Q-M25 varies greatly across [[West Asia]]. An extreme peak is seen in the [[Turkmen people|Turkmen]] of [[Golestan Province|Golestan]].<ref name=Grugni2012>{{cite journal |doi = 10.1371/journal.pone.0041252 |title = Ancient Migratory Events in the Middle East: New Clues from the Y-Chromosome Variation of Modern Iranians |year = 2012 |editor1-last = Kivisild |editor1-first = Toomas |last1 = Grugni |first1 = Viola |last2 = Battaglia |first2 = Vincenza |last3 = Hooshiar Kashani |first3 = Baharak |last4 = Parolo |first4 = Silvia |last5 = Al-Zahery |first5 = Nadia |last6 = Achilli |first6 = Alessandro |last7 = Olivieri |first7 = Anna |last8 = Gandini |first8 = Francesca |last9 = Houshmand |first9 = Massoud |last10 = Sanati |first10 = M. H. |last11 = Torroni |first11 = A |last12 = Semino |first12 = O |journal = PLoS ONE |volume = 7 |issue = 7 |pages = e41252 |pmid = 22815981 |pmc = 3399854|display-authors = 8 }}</ref> Across the whole of Iran it varies from over 9 percent of the population in the north to only 2 to 3 percent of the population in the south.<ref name=Regueiro2006>{{cite journal |author=Regueiro M, Cadenas AM, Gayden T, Underhill PA, Herrera RJ |title=Iran: tricontinental nexus for Y-chromosome driven migration |journal=Hum. Hered. |volume=61 |issue=3 |pages=132–43 |year=2006 |pmid=16770078 |doi=10.1159/000093774 }}</ref> The frequency of Q-M25 drops to only about 1 percent of the population of [[Lebanon]]'s Muslims, and it is absent from the non-Muslim population there.<ref name = "Zalloua2008">{{cite journal | doi = 10.1016/j.ajhg.2008.01.020 | last1 = Zalloua | first1 = Pierre A. |name-list-format=vanc | last2 = Xue | first2 = Y| year = 2008 | last3 = Khalife | first3 = J | last4 = Makhoul | first4 = N | last5 = Debiane | first5 = L | last6 = Platt | first6 = DE | last7 = Royyuru | first7 = AK | last8 = Herrera | first8 = RJ | last9 = Hernanz | first9 = DF| last10 = Blue-Smith | first10 = Jason | last11 = Wells | first11 = R. Spencer | last12 = Comas | first12 = David | last13 = Bertranpetit | first13 = Jaume | last14 = Tyler-Smith | first14 = Chris | last15 = Genographic | first15 = Consortium | title = Y-Chromosomal Diversity in Lebanon Is Structured by Recent Historical Events | url = | journal = American Journal of Human Genetics | volume = 82 | issue = 4| pages = 873–882 | pmid = 18374297 | pmc = 2427286 | display-authors = 8 }}</ref> However, its presence in the [[Marsh Arabs]](related to [[Sumer]]) of Iraq hints that Q-M25's West Asian history extends beyond a single localized recent founder.<ref name=Al-Zahary2011>{{cite journal | doi = 10.1186/1471-2148-11-288 | title = In search of the genetic footprints of Sumerians: A survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq | year = 2011 | last1 = Al-Zahery | first1 = Nadia | last2 = Pala | first2 = Maria | last3 = Battaglia | first3 = Vincenza | last4 = Grugni | first4 = Viola | last5 = Hamod | first5 = Mohammed A | last6 = Kashani | first6 = Baharak | last7 = Olivieri | first7 = Anna | last8 = Torroni | first8 = Antonio | last9 = Santachiara-Benerecetti | first9 = Augusta S | last10 = Semino | first10 = Ornella | journal = BMC Evolutionary Biology | volume = 11 | pages = 288 | pmid = 21970613 | pmc = 3215667}}</ref>


{|class="wikitable"
{|class="wikitable"
! Population||||Paper||N||Percentage||SNP Tested
! Population||||Paper||N||Percentage||SNP Tested
|-
|-
| [[Marsh Arabs]]||||Al-Zahery 2011<ref name=Al-Zahary2011 />||1/143||~0.70%||M25
| [[Marsh Arabs]]||||Al-Zahery 2011<ref name=Al-Zahary2011 />||1/143||~0.70%||M25/ (cf)Q1b-M378=2.1%
|-
|-
| [[Iraqi Arabs]]||||Al-Zahery 2011<ref name=Al-Zahary2011 />||0/154||~0.00%||M25
| [[Iraqis]]||||Al-Zahery 2011<ref name=Al-Zahary2011 />||0/154||~0.00%||M25/ (cf)Q1b-M378=1.9%
|-
|-
| [[North Iran|Iran (North)]]||||Regueiro 2006<ref name=Regueiro2006 />||3/33||~9.09%||M25
| [[North Iran|Iran (North)]]||||Regueiro 2006<ref name=Regueiro2006 />||3/33||~9.09%||M25

Revision as of 08:00, 8 January 2016

Haplogroup Q-M25
Possible time of originabout 16,800YBP(YFull v3.18)
Possible place of originCentral Asia
AncestorQ-F1096(F1215)
Defining mutationsM25

Haplogroup Q-M25, also known as Q1a1b is a subclade or branch of human Y-DNA haplogroup Q-F1096 (Q1a1), which is, in turn, a subclade of Q-MEH2 (Q1a). In human genetics, each Y-DNA haplogroup consititutes a biological paternal lineages back to a shared common male ancestor.

Distribution

Q-M25 has descendants in modern populations across all of Eurasia. Recent studies on the Turkmens of Iran and Afghanistan suggest that it is dominant Y-DNA in Turkmens. Only two detailed studies on the Y-DNA on Turkmens have taken place, one found that the Turkmens in Afghanistan have 31.08% Q-M25 and 2.7% Q1a3-M346(currently Q1a2-M346)(Q total 25/74=33.78%)[1], another study found that 42.6% of Iranian Turkmens have haplogroup Q-M25 (also known as Q1a1b) [2]

The Americas

Q-M25 has not been detected in pre-Columbian populations in the Americas.

Asia

Q-M25 has been detected in the Northeast of East Asia, in South Asia, and across Central Asia.[3][4][5] Though present at low frequencies, it may be one of the more widely distributed branches of Q-M242 in Asia.

Population Paper N Percentage SNP Tested
Turkmen Iran Grugni 2012[2] 29/68 ~42.6% M25 & M143
Turkmen Afghanistan Cristofaro2013[1] 23/74 ~31.2% M25 & M346/ (cf)Q1a3(currently Q1a2)=2/74 (Q total=33.8%)
Central Asia & Siberia Underhill 2000[4] 6/184 ~3.26% M25 & M143
Kalmyks Malyarchuk 2011[3] 1/60 ~1.70% M25
Han (Shanxi) Zhong 2010[5] 1/56 ~1.79% M25
Uygur (Xingjiang) Zhong 2010[5] 1/71 ~1.41% M25
Uygur (Xingjiang) Zhong 2010[5] 1/50 ~2.00% M25

West Asia

The frequency of Q-M25 varies greatly across West Asia. An extreme peak is seen in the Turkmen of Golestan.[2] Across the whole of Iran it varies from over 9 percent of the population in the north to only 2 to 3 percent of the population in the south.[6] The frequency of Q-M25 drops to only about 1 percent of the population of Lebanon's Muslims, and it is absent from the non-Muslim population there.[7] However, its presence in the Marsh Arabs(related to Sumer) of Iraq hints that Q-M25's West Asian history extends beyond a single localized recent founder.[8]

Population Paper N Percentage SNP Tested
Marsh Arabs Al-Zahery 2011[8] 1/143 ~0.70% M25/ (cf)Q1b-M378=2.1%
Iraqis Al-Zahery 2011[8] 0/154 ~0.00% M25/ (cf)Q1b-M378=1.9%
Iran (North) Regueiro 2006[6] 3/33 ~9.09% M25
Iran (South) Regueiro 2006[6] 3/117 ~2.56% M25
Iran (Azeri) Grugni 2012[2] 1/63 ~1.60% M25
Iran (Turkmen of Golestan) Grugni 2012[2] 29/68 ~42.6% M25
Lebanon (Non-Muslim) Zalloua 2008[7] 0/482 ~0.00% M25
Lebanon (Muslim) Zalloua 2008[7] 4/432 ~0.93% M25

Europe

Q-M25 is present across modern Turkey[9] and in Eastern Europe.

Population Paper N Percentage SNP Tested
East Anatolia Cinnioglu 2004[9] 1/82 ~1.20% M25

Associated SNP's

Haplogroup Q-M25 is defined by the presence of the M25 Single Nucleotide Polymorphism (SNP) as well as the M143, L714, and L716 SNPs.

Phylogenetic Tree

This is Thomas Krahn at the Genomic Research Center's Draft tree Proposed Tree for haplogroup Q-M25.

  • Q-M25 M25, M143, L714, L716
    • Q-L712 L712
      • Q-L713 L697.2, L713, L715, M365.3

See also

Y-DNA Q-M242 Subclades

3

Y-DNA Backbone Tree

References

  1. ^ a b J D Cristofaro et al., 2013, "Afghan Hindu Kush: Where Eurasian Sub-Continent Gene Flows Converge", http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0076748
  2. ^ a b c d e Grugni, Viola; Battaglia, Vincenza; Hooshiar Kashani, Baharak; Parolo, Silvia; Al-Zahery, Nadia; Achilli, Alessandro; Olivieri, Anna; Gandini, Francesca; et al. (2012). Kivisild, Toomas (ed.). "Ancient Migratory Events in the Middle East: New Clues from the Y-Chromosome Variation of Modern Iranians". PLoS ONE. 7 (7): e41252. doi:10.1371/journal.pone.0041252. PMC 3399854. PMID 22815981.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  3. ^ a b Malyarchuk, Boris; Derenko, Miroslava; Denisova, Galina; Maksimov, Arkady; Wozniak, Marcin; Grzybowski, Tomasz; Dambueva, Irina; Zakharov, Ilya (2011). "Ancient links between Siberians and Native Americans revealed by subtyping the Y chromosome haplogroup Q1a". Journal of Human Genetics. 56 (8): 583–8. doi:10.1038/jhg.2011.64. PMID 21677663.
  4. ^ a b Underhill, Peter A.; Shen, Peidong; Lin, Alice A.; Jin, Li; Passarino, Giuseppe; Yang, Wei H.; Kauffman, Erin; Bonné-Tamir, Batsheva; et al. (2000). "Y chromosome sequence variation and the history of human populations". Nature Genetics. 26 (3): 358–61. doi:10.1038/81685. PMID 11062480.
  5. ^ a b c d Zhong, H.; Shi, H.; Qi, X.-B.; Duan, Z.-Y.; Tan, P.-P.; Jin, L.; Su, B.; Ma, R. Z. (2010). "Extended Y Chromosome Investigation Suggests Postglacial Migrations of Modern Humans into 42.6East Asia via the Northern Route". Molecular Biology and Evolution. 28 (1): 717–27. doi:10.1093/molbev/msq247. PMID 20837606.
  6. ^ a b c Regueiro M, Cadenas AM, Gayden T, Underhill PA, Herrera RJ (2006). "Iran: tricontinental nexus for Y-chromosome driven migration". Hum. Hered. 61 (3): 132–43. doi:10.1159/000093774. PMID 16770078.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  7. ^ a b c Zalloua, Pierre A.; Xue, Y; Khalife, J; Makhoul, N; Debiane, L; Platt, DE; Royyuru, AK; Herrera, RJ; et al. (2008). "Y-Chromosomal Diversity in Lebanon Is Structured by Recent Historical Events". American Journal of Human Genetics. 82 (4): 873–882. doi:10.1016/j.ajhg.2008.01.020. PMC 2427286. PMID 18374297. {{cite journal}}: Unknown parameter |name-list-format= ignored (|name-list-style= suggested) (help)
  8. ^ a b c Al-Zahery, Nadia; Pala, Maria; Battaglia, Vincenza; Grugni, Viola; Hamod, Mohammed A; Kashani, Baharak; Olivieri, Anna; Torroni, Antonio; Santachiara-Benerecetti, Augusta S; Semino, Ornella (2011). "In search of the genetic footprints of Sumerians: A survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq". BMC Evolutionary Biology. 11: 288. doi:10.1186/1471-2148-11-288. PMC 3215667. PMID 21970613.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  9. ^ a b Cinnioğlu C, King R, Kivisild T, et al. (January 2004). "Excavating Y-chromosome haplotype strata in Anatolia". Hum. Genet. 114 (2): 127–48. doi:10.1007/s00439-003-1031-4. PMID 14586639.
Retrieved from "https://en.wikipedia.org/w/index.php?title=Haplogroup_Q-M25&oldid=698793402"