Jump to content

List of bacterial orders

From Wikipedia, the free encyclopedia

This is an old revision of this page, as edited by WMSR (talk | contribs) at 00:25, 31 October 2022 (refs). The present address (URL) is a permanent link to this revision, which may differ significantly from the current revision.

This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[2] and the phylogeny is based on 16S rRNA-based LTP release 132 by The All-Species Living Tree Project.[3]

Phylogeny

National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups.[4][5][6][7][8]

Cladogram was taken from GTDB release 07-RS207 (8th April 2022).[9][10][11]

Bacteria

Chloroflexota

"Dormibacteraeota"

Clade 1
Firmicutes

Firmicutes E

Firmicutes G

Bacillota s.s.

"Desulfotomaculota" (Bacillota B)

"Selenobacteria" (Bacillota C)

Firmicutes D

"Halanaerobiaeota" (Bacillota F)

Firmicutes A

"Actinobacteriobiontes"
Cyanoprokaryota
"CPR"

"Patescibacteria"

"Scotobacteriobiontes"
"FCB group"
Phylogeny of Chloroflexota[9][10][11]
"Limnocylindria"

"Limnocylindrales"

Clade 1

Phylogeny of Armatimonadota[9][10][11]
Abditibacteriia

Abditibacteriales

Fimbriimonadia

Fimbriimonadales

Chthonomonadetes

Chthonomonadales

Armatimonadia
Phylogeny of Eremiobacterota[9][10][11]
"Xenobia"

"Xenobiales"

"Eremiobacteriia"
  • Class "Xenobia" Ji et al. 2021 (UBP9)
  • Class "Eremiobacteriia" corrig. Ward, Cardona & Holland-Moritz 2019 (WPS2)

Firmicutes incertae sedis

Phylum Firmicutes E

Phylogeny of Bacillota E[9][10][11]
"Symbiobacteriia"

"Symbiobacteriales"

"Thermaerobacteria"

"Thermaerobacterales"

"Sulfobacillia"

"Sulfobacillales"

Phylum Firmicutes G

Phylogeny of Selenobacteria[9][10][11]
Phylogeny of Desulfotomaculota[9][10][11]
003054495

"Carboxydocellales"

Z‑2901

"Carboxydothermales"

"Thermincolia"

"Thermincolales"

"Desulfotomaculia"
"Dehalobacteriia"

"Dehalobacteriales"

UBA4068

UBA7702

"Peptococcia"

DRI-13

"Peptococcales"

"Desulfitobacteriia"

Phylum Firmicutes D

Phylogeny of Bacillota D[9][10][11]
"Proteinivoracia"

"Proteinivoracales"

"Dethiobacteria"

"Dethiobacterales"

"Natranaerobiia"

Natranaerobiales

Phylogeny of Halanaerobiia[9][10][11]

Phylum Firmicutes A

Phylogeny of Bacillota A[9][10][11]

Phylum "Bacillota"

Phylogeny of Bacillota[9][10][11]

Actinobacteriobiontes

Phylogeny of Actinomycetota[9][10][11]

Clade Cyanoprokaryota

Phylogeny of Margulisbacteria[9][10][11]
Phylogeny of Cyanobacteriota[9][10][11]
Phylogeny of Patescibacteria[9][10][11]

"Wirthbacteria" (CG2-30-54-11)

"Microgenomates"

"Dojkabacteria"

"Katanobacteria"

"Microgenomatia"

"Woykebacterales"

"Curtissbacterales"

"Daviesbacterales"

"Roizmanbacterales" (UBA1406)

"Gottesmanbacterales" (UBA10105)

"Levybacterales"

"Shapirobacterales" (UBA12405)

GWA2-44-7

UBA1400

cluster
"Gracilibacteria"

"Absconditabacteria"

"Gracilibacteria"

"Absconditabacterales"

"Gracilibacterales" (BD1-5)

"Abawacabacterales" (RBG-16-42-10)

"Peregrinibacterales" (UBA1369)

"Fertabacterales" (UBA4473)

"Peribacterales"

cluster
"Saccharibacteria"
cluster
"Parcubacteria"

"Berkelbacteria"

"Torokbacteria" (GCA-2792135)

ABY1

"Kerfeldbacterales" (SBBC01)

"Veblenbacterales"

"Uhrbacterales" (GWA2-46-9)

"Magasanikbacterales"

"Moisslbacterales" (UBA2591)

"Falkowbacterales"

"Buchananbacterales"

"Kuenenbacterales" (UBA2196)

"Jacksonbacterales" (UBA9629)

"Komeilibacterales" (UBA1558)

"Paceibacteria"

"Moranbacterales"

UBA9983_A

UBA6257

"Yanofskybacterales" (2-02-FULL-40-12)

"Azambacterales" (UBA10092)

"Sungbacterales"

"Ryanbacterales"

UBA9983

"Terrybacterales"

"Spechtbacterales"

"Portnoybacterales"

"Parcunitrobacterales" (GWA2-38-13b)

"Paceibacterales"

cluster

Phylum "Elulota"

  • Class "Elulimicrobia" Rodriguez-R et al. 2020
  • Class "Wirthbacteria"
  • Class "Dojkabacteria" (WS6)
  • Class "Katanobacteria" (WWE3)
  • Class "Microgenomatia"
    • Clade GWA2-44-7
    • Clade UBA1400
    • "Curtissbacterales"
    • "Daviesbacterales"
    • "Gottesmanbacterales"
    • "Levybacterales"
    • "Roizmanbacterales"
    • "Shapirobacterales"
    • "Woykebacterales" (RIF34)
  • Class "Absconditabacteria"
    • "Absconditabacterales" (SR1)
    • "BD1-5" (GN02)
  • Class "Gracilibacteria"
    • "Abawacabacterales" (RIF46)
    • "Fertabacterales" (DOLZORAL124_38_8)
    • "Peregrinibacterales" (PER)
    • "Peribacterales"
  • Class "Kazanbacteria" (Kazan)
  • Class "Howlettbacteria" (CPR2)
  • Class "Saccharimonadia" (TM7)
    • "Saccharimonadales" corrig. McLean et al. 2020
  • Class "Berkelbacteria" (ACD58)
  • Class "Andersenbacteria" (RIF9)
  • Class "Doudnabacteria" (SM2F11)
  • Class "Torokbacteria" (GCA-2792135)
  • Class "ABY1"
    • ?"Brownbacterales"
    • "Buchananbacterales" (RIF37)
    • "Falkowbacterales"
    • "Jacksonbacterales" (RIF38)
    • "Kerfeldbacterales" (RIF4)
    • "Komeilibacterales" (RIF6)
    • "Kuenenbacterales"
    • "Magasanikbacterales"
    • "Moisslbacterales" [UBA2591]
    • "Uhrbacterales"
    • "Veblenbacterales" (RIF39)
  • Class "Paceibacteria"
    • "Azambacterales"
    • Clade UBA6257
    • Clade UBA9983
    • Clade UBA9983_A
    • "Montesolbacterales"
    • "Moranbacterales" (OD1-i)
    • "Paceibacterales"
    • "Parcunitrobacterales"
    • "Portnoybacterales" (RIF22)
    • "Ryanbacterales" (RIF10)
    • "Spechtbacterales" (RIF19)
    • "Sungbacterales" (RIF17)
    • "Tagabacterales" (RIF12)
    • "Terrybacterales" (RIF13)
    • "Yanofskybacterales"

Clade "Thermotogida"

Phylum "Caldisericota"

Phylogeny of Thermotogota[9][10][11]

Spirochaetobacteriobiontes

Phylum "Muirbacteria"

Phylum "Riflebacteria"

Phylogeny of Spirochaetota[9][10][11]
"Leptospirae"
"Leptospiria"
"Euspirochaetae"
Spirochaetia

"Borreliales"

WRBN01

DSM-17781

Spirochaetales_E

Spirochaetales_A

DSM-27196

JC444

DSM-16054

"Sphaerochaetales"

"Treponematales"

Clade "Fusobacterida"

Phylum "Calescamantes"

Phylum "Dependentiae"

  • Class "Babeliae" Yeoh et al. 2016 (TM6)

Scotobacteriobiontes

Clade 2

Phylum "Aerophobetes"

Clade 3

  • Class "Elusimicrobiia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020 (TG1)
  • Class "Endomicrobia" (sic) Stingl et al. 2018

Phylum "Omnitrophica"

  • Class Chlamydiia Horn 2011
    • Hat2
    • Chlamydiales Storz & Page 1971 em. Everett et al. 1999 (Parachlamydiales, "Anoxychlamydiales", "Simkaniales")
Phylogeny of Verrucomicrobiota[9][10][11]
  • Class "Saltatorellae" Wiegand et al. 2019

Phylum "Sumerlaeota"

  • Class "Sumerlaeia" Kadnikov et al. 2018

Phylum "Poribacteria"

Phylogeny of Planctomycetota[9][10][11]

Clade FCB group

  • "Candidatus Neomarinimicrobium" Rinke et al. 2013 corrig. Oren et al. 2020 (Candidate phylum SAR406; candidate phylum Marine Group A)

Phylum "Hydrothermota"

  • Class "Stahlbacteria" (WOR-3)
  • Class "Hydrothermia" Chuvochina et al. 2019
    • "Hydrothermales" Chuvochina et al. 2019 (EM3)
    • LBFQ01 ["Pyropristinus" Colman et al. 2016]

Phylum "Cloacimonetes"

  • Class "Calditrichia" Cavalier-Smith 2020
Phylogeny of Bacteroidota[9][10][11]
Phylogeny of Acidobacteriota[9][10][11]

Phylum "Chrysiogenota"

Phylum Aquificota

  • Class "Moduliflexia" Sekiguchi et al. 2015 (KSB3)

Phylum "Tectomicrobia"

  • Class "Nitrospinia" Lucker et al. 2013

Phylum Desulfobacterota G

Phylum SZUA-79

Phylogeny of Desulfobacterota[9][10][11]

Phylum "Binatota"

Phylogeny of Myxococcota[9][10][11]

Phylum SAR324

Phylogeny of Bdellovibrionota[9][10][11]

Phylum Leptospirillaeota

Phylum Desulfobacterota_I

Phylogeny of Pseudomonadota[9][10][11]

Template:Cladogram

List of Candidate Phyla

See also

References

Template:Reflist

Template:Bacteria classification